RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 ABCC2Q92887 1545 aa-0.2□□□□□ -2.44
CHD9-204ENST00000561869 NBEAL2Q6ZNJ1 2754 aa-0.2□□□□□ -2.44
CHD9-204ENST00000561869 MAP1AP78559 2803 aaPredicted RBP-0.2□□□□□ -2.44
CHD9-204ENST00000561869 VPS8Q8N3P4 1428 aa-0.21□□□□□ -2.44
CHD9-204ENST00000561869 HERC1Q15751 4861 aa-0.21□□□□□ -2.44
CHD9-204ENST00000561869 MARF1Q9Y4F3 1742 aaKnown RBP-0.21□□□□□ -2.44
CHD9-204ENST00000561869 NRXN1Q9ULB1 1477 aa-0.21□□□□□ -2.44
CHD9-204ENST00000561869 H0Y9P7 68 aa-0.21□□□□□ -2.44
CHD9-204ENST00000561869 H3BQF6 201 aa-0.21□□□□□ -2.44
CHD9-204ENST00000561869 ASIPP42127 132 aa-0.21□□□□□ -2.44
CHD9-204ENST00000561869 S100A10P60903 97 aa-0.21□□□□□ -2.44
CHD9-204ENST00000561869 DEFB105AQ8NG35 78 aa-0.21□□□□□ -2.44
CHD9-204ENST00000561869 PMCHL2Q9BQD1 86 aa-0.21□□□□□ -2.44
CHD9-204ENST00000561869 LRRC37AA6NMS7 1700 aa-0.21□□□□□ -2.44
CHD9-204ENST00000561869 KIAA1551Q9HCM1 1747 aa-0.21□□□□□ -2.44
CHD9-204ENST00000561869 FMN2Q9NZ56 1722 aa-0.21□□□□□ -2.44
CHD9-204ENST00000561869 TRBV7-7A0A0K0K1E9 115 aa-0.22□□□□□ -2.44
CHD9-204ENST00000561869 SYS1-DBNDD2H3BUS1 97 aa-0.22□□□□□ -2.44
CHD9-204ENST00000561869 UQCRHP07919 91 aa-0.22□□□□□ -2.44
CHD9-204ENST00000561869 LINC00032P0C843 101 aa-0.22□□□□□ -2.44
CHD9-204ENST00000561869 KLK9Q2XQG4 91 aa-0.22□□□□□ -2.44
CHD9-204ENST00000561869 DPY30Q9C005 99 aa-0.22□□□□□ -2.44
CHD9-204ENST00000561869 AP4S1Q9Y587 144 aa-0.22□□□□□ -2.44
CHD9-204ENST00000561869 SRRM2Q9UQ35 2752 aaKnown RBP-0.22□□□□□ -2.44
CHD9-204ENST00000561869 KNDC1Q76NI1 1749 aa-0.22□□□□□ -2.44
CHD9-204ENST00000561869 CNOT1A5YKK6 2376 aaKnown RBP-0.23□□□□□ -2.45
CHD9-204ENST00000561869 PDZD2O15018 2839 aa-0.23□□□□□ -2.45
CHD9-204ENST00000561869 EPRSP07814 1512 aaKnown RBP-0.23□□□□□ -2.45
CHD9-204ENST00000561869 SAMD9Q5K651 1589 aa-0.23□□□□□ -2.45
CHD9-204ENST00000561869 HMGN3Q15651 99 aa-0.23□□□□□ -2.45
CHD9-204ENST00000561869 KRTAP19-7Q3SYF9 63 aa-0.23□□□□□ -2.45
CHD9-204ENST00000561869 DEFB107AQ8IZN7 70 aa-0.23□□□□□ -2.45
CHD9-204ENST00000561869 IQSEC2Q5JU85 1478 aa-0.23□□□□□ -2.45
CHD9-204ENST00000561869 EPPK1P58107 5090 aaKnown RBP-0.23□□□□□ -2.45
CHD9-204ENST00000561869 TEP1Q99973 2627 aaKnown RBP-0.24□□□□□ -2.45
CHD9-204ENST00000561869 CPSF4LA6NMK7 179 aaKnown RBP-0.24□□□□□ -2.45
CHD9-204ENST00000561869 M0R2T5 61 aa-0.24□□□□□ -2.45
CHD9-204ENST00000561869 ARMS2P0C7Q2 107 aa-0.24□□□□□ -2.45
CHD9-204ENST00000561869 NCMAPQ5T1S8 102 aa-0.24□□□□□ -2.45
CHD9-204ENST00000561869 FXYD6Q9H0Q3 95 aa-0.24□□□□□ -2.45
CHD9-204ENST00000561869 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.24□□□□□ -2.45
CHD9-204ENST00000561869 FANCAO15360 1455 aa-0.24□□□□□ -2.45
CHD9-204ENST00000561869 ABCC10Q5T3U5 1492 aa-0.24□□□□□ -2.45
CHD9-204ENST00000561869 FASNP49327 2511 aaKnown RBP-0.24□□□□□ -2.45
CHD9-204ENST00000561869 CUX1P39880 1505 aa-0.24□□□□□ -2.45
CHD9-204ENST00000561869 ANKRD36A6QL64 1941 aa-0.25□□□□□ -2.45
CHD9-204ENST00000561869 PCNX1Q96RV3 2341 aa-0.25□□□□□ -2.45
CHD9-204ENST00000561869 LOC730098B7Z3J9 87 aa-0.25□□□□□ -2.45
CHD9-204ENST00000561869 M0R143 59 aa-0.25□□□□□ -2.45
CHD9-204ENST00000561869 GNGT1P63211 74 aa-0.25□□□□□ -2.45
CHD9-204ENST00000561869 ALKAL2Q6UX46 152 aa-0.25□□□□□ -2.45
CHD9-204ENST00000561869 CRIPTQ9P021 101 aa-0.25□□□□□ -2.45
CHD9-204ENST00000561869 APLNQ9ULZ1 77 aa-0.25□□□□□ -2.45
CHD9-204ENST00000561869 FLGP20930 4061 aaPredicted RBP-0.25□□□□□ -2.45
CHD9-204ENST00000561869 C5P01031 1676 aa-0.25□□□□□ -2.45
CHD9-204ENST00000561869 ANKRD26Q9UPS8 1709 aa-0.25□□□□□ -2.45
CHD9-204ENST00000561869 FAT1Q14517 4588 aa-0.26□□□□□ -2.45
CHD9-204ENST00000561869 MON2Q7Z3U7 1717 aa-0.26□□□□□ -2.45
CHD9-204ENST00000561869 CLTCQ00610 1675 aaKnown RBP-0.26□□□□□ -2.45
CHD9-204ENST00000561869 PKD1P98161 4303 aa-0.26□□□□□ -2.45
CHD9-204ENST00000561869 TROQ12816 1431 aaPredicted RBP-0.26□□□□□ -2.45
CHD9-204ENST00000561869 KRTAP20-2Q3LI61 65 aa-0.26□□□□□ -2.45
CHD9-204ENST00000561869 ETDBQ3ZM63 59 aa-0.26□□□□□ -2.45
CHD9-204ENST00000561869 PSENENQ9NZ42 101 aa-0.26□□□□□ -2.45
CHD9-204ENST00000561869 NBEAL1Q6ZS30 2694 aa-0.26□□□□□ -2.45
CHD9-204ENST00000561869 LAMA5O15230 3695 aa-0.27□□□□□ -2.45
CHD9-204ENST00000561869 UQCRHLA0A096LP55 91 aa-0.27□□□□□ -2.45
CHD9-204ENST00000561869 F8WEM9 126 aa-0.27□□□□□ -2.45
CHD9-204ENST00000561869 I3L3M4 83 aa-0.27□□□□□ -2.45
CHD9-204ENST00000561869 KRTAP19-8Q3LI54 63 aa-0.27□□□□□ -2.45
CHD9-204ENST00000561869 H1FX-AS1Q4G0G2 97 aa-0.27□□□□□ -2.45
CHD9-204ENST00000561869 COL5A1-AS1Q5SY13 56 aa-0.27□□□□□ -2.45
CHD9-204ENST00000561869 ZNF720Q7Z2F6 126 aa-0.27□□□□□ -2.45
CHD9-204ENST00000561869 MRPL34Q9BQ48 92 aaKnown RBP-0.27□□□□□ -2.45
CHD9-204ENST00000561869 SNHG12Q9BXW3 62 aa-0.27□□□□□ -2.45
CHD9-204ENST00000561869 UBE2D4Q9Y2X8 147 aa-0.27□□□□□ -2.45
CHD9-204ENST00000561869 FAT3Q8TDW7 4589 aa-0.27□□□□□ -2.45
CHD9-204ENST00000561869 COL6A5A8TX70 2615 aa-0.27□□□□□ -2.45
CHD9-204ENST00000561869 KNL1Q8NG31 2342 aa-0.27□□□□□ -2.45
CHD9-204ENST00000561869 TRANK1O15050 2925 aa-0.27□□□□□ -2.45
CHD9-204ENST00000561869 STARD9Q9P2P6 4700 aa-0.28□□□□□ -2.45
CHD9-204ENST00000561869 ATP10BO94823 1461 aa-0.28□□□□□ -2.45
CHD9-204ENST00000561869 D6R8Y8 96 aa-0.28□□□□□ -2.45
CHD9-204ENST00000561869 S100A8P05109 93 aa-0.28□□□□□ -2.45
CHD9-204ENST00000561869 FAUP35544 74 aaKnown RBP-0.28□□□□□ -2.45
CHD9-204ENST00000561869 MUSTN1Q8IVN3 82 aa-0.28□□□□□ -2.45
CHD9-204ENST00000561869 TGP01266 2768 aa-0.28□□□□□ -2.45
CHD9-204ENST00000561869 CRYBG1Q9Y4K1 1723 aa-0.28□□□□□ -2.45
CHD9-204ENST00000561869 SVEP1Q4LDE5 3571 aa-0.29□□□□□ -2.46
CHD9-204ENST00000561869 CCL22O00626 93 aa-0.29□□□□□ -2.46
CHD9-204ENST00000561869 IGLC2P0DOY2 106 aa-0.29□□□□□ -2.46
CHD9-204ENST00000561869 IGLC3P0DOY3 106 aa-0.29□□□□□ -2.46
CHD9-204ENST00000561869 PKIAP61925 76 aa-0.29□□□□□ -2.46
CHD9-204ENST00000561869 HIGD1BQ9P298 99 aa-0.29□□□□□ -2.46
CHD9-204ENST00000561869 ALKQ9UM73 1620 aa-0.29□□□□□ -2.46
CHD9-204ENST00000561869 DNAH6Q9C0G6 4158 aa-0.29□□□□□ -2.46
CHD9-204ENST00000561869 CLIP1P30622 1438 aa-0.3□□□□□ -2.46
CHD9-204ENST00000561869 CEP162Q5TB80 1403 aa-0.3□□□□□ -2.46
CHD9-204ENST00000561869 SPTY2D1-AS1A0A0U1RR47 76 aa-0.3□□□□□ -2.46
CHD9-204ENST00000561869 LEPROTL1O95214 131 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms