RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 A0A1B0GU33 70 aa1.79□□□□□ -2.12
HERC1-215ENST00000561436 GRIFINA4D1Z8 144 aa1.79□□□□□ -2.12
HERC1-215ENST00000561436 C1orf196B1AJZ1 125 aa1.79□□□□□ -2.12
HERC1-215ENST00000561436 G3V3Q6 166 aa1.79□□□□□ -2.12
HERC1-215ENST00000561436 M0R036 132 aa1.79□□□□□ -2.12
HERC1-215ENST00000561436 NUPR1O60356 82 aa1.79□□□□□ -2.12
HERC1-215ENST00000561436 PPP1R17O96001 155 aa1.79□□□□□ -2.12
HERC1-215ENST00000561436 LGALS3P17931 250 aaKnown RBP1.79□□□□□ -2.12
HERC1-215ENST00000561436 H2BFSP57053 126 aa1.79□□□□□ -2.12
HERC1-215ENST00000561436 CENPWQ5EE01 88 aa1.79□□□□□ -2.12
HERC1-215ENST00000561436 C1orf137Q5JT78 98 aa1.79□□□□□ -2.12
HERC1-215ENST00000561436 FAM19A3Q7Z5A8 133 aa1.79□□□□□ -2.12
HERC1-215ENST00000561436 C9orf62Q8N4C0 152 aa1.79□□□□□ -2.12
HERC1-215ENST00000561436 NUP35Q8NFH5 326 aa1.79□□□□□ -2.12
HERC1-215ENST00000561436 OR10D4PQ8NGN7 298 aa1.79□□□□□ -2.12
HERC1-215ENST00000561436 OR10AG1Q8NH19 301 aa1.79□□□□□ -2.12
HERC1-215ENST00000561436 S100ZQ8WXG8 99 aa1.79□□□□□ -2.12
HERC1-215ENST00000561436 CNFNQ9BYD5 112 aa1.79□□□□□ -2.12
HERC1-215ENST00000561436 MRPL35Q9NZE8 188 aaKnown RBP1.79□□□□□ -2.12
HERC1-215ENST00000561436 DNAH8Q96JB1 4490 aa1.79□□□□□ -2.12
HERC1-215ENST00000561436 TRBV6-5A0A0K0K1A5 114 aa1.78□□□□□ -2.12
HERC1-215ENST00000561436 LINC00959A0A1B0GUT2 108 aa1.78□□□□□ -2.12
HERC1-215ENST00000561436 UMAD1C9J7I0 102 aa1.78□□□□□ -2.12
HERC1-215ENST00000561436 C8orf87E5RJ46 101 aa1.78□□□□□ -2.12
HERC1-215ENST00000561436 I3L3M4 83 aa1.78□□□□□ -2.12
HERC1-215ENST00000561436 COX7A2LO14548 114 aa1.78□□□□□ -2.12
HERC1-215ENST00000561436 SLC25A20O43772 301 aa1.78□□□□□ -2.12
HERC1-215ENST00000561436 IGLC6P0CF74 106 aa1.78□□□□□ -2.12
HERC1-215ENST00000561436 CRYGAP11844 174 aa1.78□□□□□ -2.12
HERC1-215ENST00000561436 AKR1C3P42330 323 aa1.78□□□□□ -2.12
HERC1-215ENST00000561436 NKX2-5P52952 324 aaPredicted RBP1.78□□□□□ -2.12
HERC1-215ENST00000561436 C9orf116Q5BN46 136 aaPredicted RBP1.78□□□□□ -2.12
HERC1-215ENST00000561436 AKR1C8PQ5T2L2 129 aa1.78□□□□□ -2.12
HERC1-215ENST00000561436 CLPSL2Q6UWE3 100 aa1.78□□□□□ -2.12
HERC1-215ENST00000561436 FP248Q71RG6 208 aaPredicted RBP1.78□□□□□ -2.12
HERC1-215ENST00000561436 SMIM15Q7Z3B0 74 aa1.78□□□□□ -2.12
HERC1-215ENST00000561436 BAGE2Q86Y30 109 aa1.78□□□□□ -2.12
HERC1-215ENST00000561436 GPR98Q8WXG9 6306 aa1.77□□□□□ -2.13
HERC1-215ENST00000561436 MUC21A0A0G2JKD1 596 aa1.77□□□□□ -2.13
HERC1-215ENST00000561436 A0A1B0GVG6 124 aa1.77□□□□□ -2.13
HERC1-215ENST00000561436 INMT-MINDY4F8WBC2 141 aa1.77□□□□□ -2.13
HERC1-215ENST00000561436 PFDN1O60925 122 aa1.77□□□□□ -2.13
HERC1-215ENST00000561436 RPL28P46779 137 aaKnown RBP1.77□□□□□ -2.13
HERC1-215ENST00000561436 RAB5CP51148 216 aa1.77□□□□□ -2.13
HERC1-215ENST00000561436 DEFA1P59665 94 aa1.77□□□□□ -2.13
HERC1-215ENST00000561436 DEFA3P59666 94 aa1.77□□□□□ -2.13
HERC1-215ENST00000561436 FAM229BQ4G0N7 80 aa1.77□□□□□ -2.13
HERC1-215ENST00000561436 SPAG11AQ6PDA7 123 aa1.77□□□□□ -2.13
HERC1-215ENST00000561436 OR2D3Q8NGH3 330 aa1.77□□□□□ -2.13
HERC1-215ENST00000561436 MBD3L1Q8WWY6 194 aa1.77□□□□□ -2.13
HERC1-215ENST00000561436 TIMM21Q9BVV7 248 aa1.77□□□□□ -2.13
HERC1-215ENST00000561436 CDC42SE2Q9NRR3 84 aa1.77□□□□□ -2.13
HERC1-215ENST00000561436 TP73-AS1Q9UF72 201 aa1.77□□□□□ -2.13
HERC1-215ENST00000561436 ALG5Q9Y673 324 aa1.77□□□□□ -2.13
HERC1-215ENST00000561436 TMSB15BA0A087X1C1 80 aa1.76□□□□□ -2.13
HERC1-215ENST00000561436 TRBV30A0A0K0K1B3 111 aa1.76□□□□□ -2.13
HERC1-215ENST00000561436 TRBV27A0A0K0K1C4 114 aa1.76□□□□□ -2.13
HERC1-215ENST00000561436 MAP1LC3B2A6NCE7 125 aa1.76□□□□□ -2.13
HERC1-215ENST00000561436 NDUFA1O15239 70 aa1.76□□□□□ -2.13
HERC1-215ENST00000561436 SSNA1O43805 119 aa1.76□□□□□ -2.13
HERC1-215ENST00000561436 SIX6O95475 246 aa1.76□□□□□ -2.13
HERC1-215ENST00000561436 IFNA1P01562 189 aa1.76□□□□□ -2.13
HERC1-215ENST00000561436 MGPP08493 103 aa1.76□□□□□ -2.13
HERC1-215ENST00000561436 XCL1P47992 114 aa1.76□□□□□ -2.13
HERC1-215ENST00000561436 FOXA3P55318 350 aaPredicted RBP1.76□□□□□ -2.13
HERC1-215ENST00000561436 ASB16-AS1Q495Z4 193 aa1.76□□□□□ -2.13
HERC1-215ENST00000561436 SCGB1D4Q6XE38 83 aa1.76□□□□□ -2.13
HERC1-215ENST00000561436 SMIM3Q9BZL3 60 aa1.76□□□□□ -2.13
HERC1-215ENST00000561436 MAP1LC3BQ9GZQ8 125 aa1.76□□□□□ -2.13
HERC1-215ENST00000561436 EIF5A2Q9GZV4 153 aaKnown RBP1.76□□□□□ -2.13
HERC1-215ENST00000561436 SPANXB1Q9NS25 103 aaPredicted RBP1.76□□□□□ -2.13
HERC1-215ENST00000561436 SDHAF1A6NFY7 115 aa1.75□□□□□ -2.13
HERC1-215ENST00000561436 PDE6DO43924 150 aa1.75□□□□□ -2.13
HERC1-215ENST00000561436 UBE2G2P60604 165 aa1.75□□□□□ -2.13
HERC1-215ENST00000561436 UBE2BP63146 152 aa1.75□□□□□ -2.13
HERC1-215ENST00000561436 CCL20P78556 96 aa1.75□□□□□ -2.13
HERC1-215ENST00000561436 SPAG11BQ08648 103 aa1.75□□□□□ -2.13
HERC1-215ENST00000561436 PHF5AQ7RTV0 110 aaKnown RBP1.75□□□□□ -2.13
HERC1-215ENST00000561436 BOD1L2Q8IYS8 172 aa1.75□□□□□ -2.13
HERC1-215ENST00000561436 PACRGQ96M98 296 aaPredicted RBP1.75□□□□□ -2.13
HERC1-215ENST00000561436 GNB1LQ9BYB4 327 aa1.75□□□□□ -2.13
HERC1-215ENST00000561436 SMDT1Q9H4I9 107 aa1.75□□□□□ -2.13
HERC1-215ENST00000561436 ST20Q9HBF5 79 aa1.75□□□□□ -2.13
HERC1-215ENST00000561436 MANBALQ9NQG1 85 aa1.75□□□□□ -2.13
HERC1-215ENST00000561436 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.74□□□□□ -2.13
HERC1-215ENST00000561436 IGKV3OR2-268A0A0C4DH90 116 aa1.74□□□□□ -2.13
HERC1-215ENST00000561436 A0A1W2PNM2 257 aa1.74□□□□□ -2.13
HERC1-215ENST00000561436 IGKV2-29A2NJV5 120 aaPredicted RBP1.74□□□□□ -2.13
HERC1-215ENST00000561436 C7orf77A4D0Y5 90 aa1.74□□□□□ -2.13
HERC1-215ENST00000561436 SMLR1H3BR10 107 aa1.74□□□□□ -2.13
HERC1-215ENST00000561436 ZNF73O43830 326 aaPredicted RBP1.74□□□□□ -2.13
HERC1-215ENST00000561436 BCE1O60756 84 aa1.74□□□□□ -2.13
HERC1-215ENST00000561436 BCL2P10415 239 aa1.74□□□□□ -2.13
HERC1-215ENST00000561436 ZNF22P17026 224 aaPredicted RBP1.74□□□□□ -2.13
HERC1-215ENST00000561436 RPL35P42766 123 aaKnown RBP1.74□□□□□ -2.13
HERC1-215ENST00000561436 POLR2KP53803 58 aaKnown RBP1.74□□□□□ -2.13
HERC1-215ENST00000561436 RPS29P62273 56 aaKnown RBP1.74□□□□□ -2.13
HERC1-215ENST00000561436 MRPS36P82909 103 aaKnown RBP1.74□□□□□ -2.13
HERC1-215ENST00000561436 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
HERC1-215ENST00000561436 LYZL1Q6UWQ5 148 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 361.7 ms