RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 TMEM223A0PJW6 202 aa6.27□□□□□ -1.41
HERC1-212ENST00000561348 GAGE10A6NGK3 116 aa6.27□□□□□ -1.41
HERC1-212ENST00000561348 LINC00158P58513 81 aa6.27□□□□□ -1.41
HERC1-212ENST00000561348 CTAG1AP78358 180 aa6.27□□□□□ -1.41
HERC1-212ENST00000561348 MAP1LC3CQ9BXW4 147 aa6.27□□□□□ -1.41
HERC1-212ENST00000561348 ERG28Q9UKR5 140 aa6.27□□□□□ -1.41
HERC1-212ENST00000561348 C22orf24Q9Y442 160 aa6.27□□□□□ -1.41
HERC1-212ENST00000561348 ODF1Q14990 250 aa6.26□□□□□ -1.41
HERC1-212ENST00000561348 MEIG1Q5JSS6 88 aa6.26□□□□□ -1.41
HERC1-212ENST00000561348 KRTAP7-1Q8IUC3 87 aa6.26□□□□□ -1.41
HERC1-212ENST00000561348 NKAPP1Q8N9T2 125 aa6.26□□□□□ -1.41
HERC1-212ENST00000561348 RPL37AP8A6NKH3 93 aa6.25□□□□□ -1.41
HERC1-212ENST00000561348 KRTAP29-1A8MX34 341 aaPredicted RBP6.25□□□□□ -1.41
HERC1-212ENST00000561348 DPM2O94777 84 aa6.25□□□□□ -1.41
HERC1-212ENST00000561348 SCGB1D1O95968 90 aa6.25□□□□□ -1.41
HERC1-212ENST00000561348 OXTP01178 125 aa6.25□□□□□ -1.41
HERC1-212ENST00000561348 LBHQ53QV2 105 aaPredicted RBP6.25□□□□□ -1.41
HERC1-212ENST00000561348 KRTAP11-1Q8IUC1 163 aa6.25□□□□□ -1.41
HERC1-212ENST00000561348 IGKCP01834 107 aa6.24□□□□□ -1.41
HERC1-212ENST00000561348 MRPL55Q7Z7F7 128 aaKnown RBP6.24□□□□□ -1.41
HERC1-212ENST00000561348 PRO1933Q9H354 126 aa6.24□□□□□ -1.41
HERC1-212ENST00000561348 MYCBP2O75592 4640 aa6.24□□□□□ -1.41
HERC1-212ENST00000561348 SMIM13P0DJ93 91 aa6.23□□□□□ -1.41
HERC1-212ENST00000561348 PLNP26678 52 aa6.23□□□□□ -1.41
HERC1-212ENST00000561348 DDTP30046 118 aa6.23□□□□□ -1.41
HERC1-212ENST00000561348 HERVK_113P61574 105 aa6.23□□□□□ -1.41
HERC1-212ENST00000561348 REG3GQ6UW15 175 aa6.23□□□□□ -1.41
HERC1-212ENST00000561348 SPINK6Q6UWN8 80 aa6.23□□□□□ -1.41
HERC1-212ENST00000561348 SND1-IT1Q9HBX3 110 aa6.23□□□□□ -1.41
HERC1-212ENST00000561348 IGLV7-43P04211 117 aa6.22□□□□□ -1.41
HERC1-212ENST00000561348 KRTDAPP60985 99 aa6.22□□□□□ -1.41
HERC1-212ENST00000561348 SFTA2Q6UW10 78 aa6.22□□□□□ -1.41
HERC1-212ENST00000561348 NDUFA12Q9UI09 145 aa6.22□□□□□ -1.41
HERC1-212ENST00000561348 IGKV2-28A0A075B6P5 120 aa6.21□□□□□ -1.42
HERC1-212ENST00000561348 MYMXA0A1B0GTQ4 84 aa6.21□□□□□ -1.42
HERC1-212ENST00000561348 IGKV2D-28P01615 120 aa6.21□□□□□ -1.42
HERC1-212ENST00000561348 LGALS3P17931 250 aaKnown RBP6.21□□□□□ -1.42
HERC1-212ENST00000561348 COX17Q14061 63 aa6.21□□□□□ -1.42
HERC1-212ENST00000561348 LINC00167Q96N53 147 aa6.21□□□□□ -1.42
HERC1-212ENST00000561348 SYS1-DBNDD2H3BUS1 97 aa6.2□□□□□ -1.42
HERC1-212ENST00000561348 J3QQQ9 107 aa6.2□□□□□ -1.42
HERC1-212ENST00000561348 LEPROTO15243 131 aa6.2□□□□□ -1.42
HERC1-212ENST00000561348 RPL24P83731 157 aaKnown RBP6.2□□□□□ -1.42
HERC1-212ENST00000561348 DIRC1Q969H9 104 aa6.2□□□□□ -1.42
HERC1-212ENST00000561348 PLEKHB2Q96CS7 222 aa6.2□□□□□ -1.42
HERC1-212ENST00000561348 C14orf144Q96I85 54 aa6.2□□□□□ -1.42
HERC1-212ENST00000561348 TSPEAR-AS2P59090 65 aa6.19□□□□□ -1.42
HERC1-212ENST00000561348 SRSF9Q13242 221 aaKnown RBP eCLIP6.19□□□□□ -1.42
HERC1-212ENST00000561348 MIR7-3HGQ8N6C7 128 aa6.19□□□□□ -1.42
HERC1-212ENST00000561348 DAND5Q8N907 189 aa6.19□□□□□ -1.42
HERC1-212ENST00000561348 VAMP8Q9BV40 100 aa6.19□□□□□ -1.42
HERC1-212ENST00000561348 C3orf79P0CE67 100 aa6.18□□□□□ -1.42
HERC1-212ENST00000561348 HERV-K104P63124 156 aa6.18□□□□□ -1.42
HERC1-212ENST00000561348 BOD1L2Q8IYS8 172 aa6.18□□□□□ -1.42
HERC1-212ENST00000561348 TP73-AS1Q9UF72 201 aa6.18□□□□□ -1.42
HERC1-212ENST00000561348 LRP1Q07954 4544 aaKnown RBP6.17□□□□□ -1.42
HERC1-212ENST00000561348 NCR3O14931 201 aa6.17□□□□□ -1.42
HERC1-212ENST00000561348 UBE2AP49459 152 aa6.17□□□□□ -1.42
HERC1-212ENST00000561348 NPC2P61916 151 aa6.17□□□□□ -1.42
HERC1-212ENST00000561348 PET117Q6UWS5 81 aa6.17□□□□□ -1.42
HERC1-212ENST00000561348 PLA2G2DQ9UNK4 145 aa6.17□□□□□ -1.42
HERC1-212ENST00000561348 H0Y9J4 135 aa6.16□□□□□ -1.42
HERC1-212ENST00000561348 VPREB1P12018 145 aa6.16□□□□□ -1.42
HERC1-212ENST00000561348 ATOH7Q8N100 152 aa6.16□□□□□ -1.42
HERC1-212ENST00000561348 MIEN1Q9BRT3 115 aa6.16□□□□□ -1.42
HERC1-212ENST00000561348 PKHD1L1Q86WI1 4243 aa6.15□□□□□ -1.42
HERC1-212ENST00000561348 C20orf202A1L168 122 aa6.15□□□□□ -1.42
HERC1-212ENST00000561348 TMEM238C9JI98 176 aa6.15□□□□□ -1.42
HERC1-212ENST00000561348 BCE1O60756 84 aa6.15□□□□□ -1.42
HERC1-212ENST00000561348 RPL28P46779 137 aaKnown RBP6.15□□□□□ -1.42
HERC1-212ENST00000561348 FAM19A1Q7Z5A9 133 aa6.15□□□□□ -1.42
HERC1-212ENST00000561348 Q8NDZ9 215 aa6.15□□□□□ -1.42
HERC1-212ENST00000561348 LINC01600Q96MT4 127 aa6.15□□□□□ -1.42
HERC1-212ENST00000561348 PAM16Q9Y3D7 125 aa6.15□□□□□ -1.42
HERC1-212ENST00000561348 IGLV5-37A0A075B6J1 123 aa6.14□□□□□ -1.43
HERC1-212ENST00000561348 ZNF861PO60384 105 aa6.14□□□□□ -1.43
HERC1-212ENST00000561348 MT1HL1P0DM35 61 aa6.14□□□□□ -1.43
HERC1-212ENST00000561348 SPATA45Q537H7 98 aa6.14□□□□□ -1.43
HERC1-212ENST00000561348 LINC01545Q5VT33 79 aa6.14□□□□□ -1.43
HERC1-212ENST00000561348 PRR26Q8N8Z3 221 aa6.14□□□□□ -1.43
HERC1-212ENST00000561348 E9PLD3 99 aa6.13□□□□□ -1.43
HERC1-212ENST00000561348 M0R143 59 aa6.13□□□□□ -1.43
HERC1-212ENST00000561348 M0R378 163 aa6.13□□□□□ -1.43
HERC1-212ENST00000561348 NMUP48645 174 aa6.13□□□□□ -1.43
HERC1-212ENST00000561348 PRLHP81277 87 aa6.13□□□□□ -1.43
HERC1-212ENST00000561348 HERC1Q15751 4861 aa6.12□□□□□ -1.43
HERC1-212ENST00000561348 IGLV1-50A0A075B6I6 118 aa6.12□□□□□ -1.43
HERC1-212ENST00000561348 ZNF815PA8K554 130 aa6.12□□□□□ -1.43
HERC1-212ENST00000561348 FAT3Q8TDW7 4589 aa6.12□□□□□ -1.43
HERC1-212ENST00000561348 TTTY13Q9BZ97 58 aa6.12□□□□□ -1.43
HERC1-212ENST00000561348 TMEM126AQ9H061 195 aa6.12□□□□□ -1.43
HERC1-212ENST00000561348 UQCR10Q9UDW1 63 aa6.12□□□□□ -1.43
HERC1-212ENST00000561348 A0A0J9YXY3 114 aa6.11□□□□□ -1.43
HERC1-212ENST00000561348 ANKRD39Q53RE8 183 aa6.11□□□□□ -1.43
HERC1-212ENST00000561348 IGKV2D-26A0A0A0MRZ7 120 aa6.1□□□□□ -1.43
HERC1-212ENST00000561348 H3BS24 57 aa6.1□□□□□ -1.43
HERC1-212ENST00000561348 SVIPQ8NHG7 77 aa6.1□□□□□ -1.43
HERC1-212ENST00000561348 HIGD2AQ9BW72 106 aa6.1□□□□□ -1.43
HERC1-212ENST00000561348 SNHG12Q9BXW3 62 aa6.1□□□□□ -1.43
HERC1-212ENST00000561348 TRBV10-3A0A0K0K1G6 114 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms