RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 SPEF2Q9C093 1822 aa-2.67□□□□□ -2.84
CASC4-211ENST00000561305 KCNRGQ8N5I3 272 aa-2.67□□□□□ -2.84
CASC4-211ENST00000561305 PP6455Q8WZ26 134 aa-2.67□□□□□ -2.84
CASC4-211ENST00000561305 UBE2D4Q9Y2X8 147 aa-2.67□□□□□ -2.84
CASC4-211ENST00000561305 PDCD11Q14690 1871 aaKnown RBP-2.67□□□□□ -2.84
CASC4-211ENST00000561305 CDK5RAP2Q96SN8 1893 aa-2.67□□□□□ -2.84
CASC4-211ENST00000561305 TRBV7-7A0A0K0K1E9 115 aa-2.68□□□□□ -2.84
CASC4-211ENST00000561305 FAM223BA6NKX1 122 aa-2.68□□□□□ -2.84
CASC4-211ENST00000561305 NDUFA3O95167 84 aa-2.68□□□□□ -2.84
CASC4-211ENST00000561305 SKA2Q8WVK7 121 aaPredicted RBP-2.68□□□□□ -2.84
CASC4-211ENST00000561305 PSENENQ9NZ42 101 aa-2.68□□□□□ -2.84
CASC4-211ENST00000561305 ANKRD36A6QL64 1941 aa-2.68□□□□□ -2.84
CASC4-211ENST00000561305 CUX1P39880 1505 aa-2.68□□□□□ -2.84
CASC4-211ENST00000561305 ADGRG4Q8IZF6 3080 aa-2.69□□□□□ -2.84
CASC4-211ENST00000561305 MRC2Q9UBG0 1479 aa-2.69□□□□□ -2.84
CASC4-211ENST00000561305 A0A0G2JND7 137 aa-2.69□□□□□ -2.84
CASC4-211ENST00000561305 TSPAN19P0C672 248 aa-2.69□□□□□ -2.84
CASC4-211ENST00000561305 S100GP29377 79 aa-2.69□□□□□ -2.84
CASC4-211ENST00000561305 SPANXCQ9NY87 97 aa-2.69□□□□□ -2.84
CASC4-211ENST00000561305 SHROOM2Q13796 1616 aa-2.69□□□□□ -2.84
CASC4-211ENST00000561305 PREX1Q8TCU6 1659 aa-2.69□□□□□ -2.84
CASC4-211ENST00000561305 DIP2CQ9Y2E4 1556 aa-2.7□□□□□ -2.84
CASC4-211ENST00000561305 MGAQ8IWI9 3026 aa-2.7□□□□□ -2.84
CASC4-211ENST00000561305 DBIP07108 87 aaKnown RBP-2.7□□□□□ -2.84
CASC4-211ENST00000561305 LINC00694P0DN24 101 aa-2.7□□□□□ -2.84
CASC4-211ENST00000561305 CCDC153Q494R4 210 aa-2.7□□□□□ -2.84
CASC4-211ENST00000561305 ARL11Q969Q4 196 aa-2.7□□□□□ -2.84
CASC4-211ENST00000561305 SNRNP25Q9BV90 132 aaKnown RBP-2.71□□□□□ -2.84
CASC4-211ENST00000561305 CPSF1Q10570 1443 aaKnown RBP-2.71□□□□□ -2.84
CASC4-211ENST00000561305 PLXNC1O60486 1568 aa-2.71□□□□□ -2.84
CASC4-211ENST00000561305 CEP152O94986 1710 aa-2.71□□□□□ -2.84
CASC4-211ENST00000561305 ABCC10Q5T3U5 1492 aa-2.71□□□□□ -2.84
CASC4-211ENST00000561305 TARBP1Q13395 1621 aaKnown RBP-2.71□□□□□ -2.84
CASC4-211ENST00000561305 ARMS2P0C7Q2 107 aa-2.72□□□□□ -2.84
CASC4-211ENST00000561305 SPANXDQ9BXN6 97 aa-2.72□□□□□ -2.84
CASC4-211ENST00000561305 SMPXQ9UHP9 88 aa-2.72□□□□□ -2.84
CASC4-211ENST00000561305 SCN11AQ9UI33 1791 aa-2.72□□□□□ -2.85
CASC4-211ENST00000561305 A2ML1A8K2U0 1454 aa-2.72□□□□□ -2.85
CASC4-211ENST00000561305 A0A1B0GV72 72 aa-2.73□□□□□ -2.85
CASC4-211ENST00000561305 H0Y9P7 68 aa-2.73□□□□□ -2.85
CASC4-211ENST00000561305 H3BQF6 201 aa-2.73□□□□□ -2.85
CASC4-211ENST00000561305 AIF1LQ9BQI0 150 aa-2.73□□□□□ -2.85
CASC4-211ENST00000561305 BOD1L1Q8NFC6 3051 aa-2.73□□□□□ -2.85
CASC4-211ENST00000561305 ABCC5O15440 1437 aa-2.74□□□□□ -2.85
CASC4-211ENST00000561305 J3QR89 54 aa-2.74□□□□□ -2.85
CASC4-211ENST00000561305 LSM10Q969L4 123 aaKnown RBP-2.74□□□□□ -2.85
CASC4-211ENST00000561305 CFTRP13569 1480 aa-2.74□□□□□ -2.85
CASC4-211ENST00000561305 TNP1P09430 55 aa-2.75□□□□□ -2.85
CASC4-211ENST00000561305 GNGT1P63211 74 aa-2.75□□□□□ -2.85
CASC4-211ENST00000561305 COMMD6Q7Z4G1 85 aa-2.75□□□□□ -2.85
CASC4-211ENST00000561305 LINC00474Q9P2X8 69 aa-2.75□□□□□ -2.85
CASC4-211ENST00000561305 HSPB11Q9Y547 144 aa-2.75□□□□□ -2.85
CASC4-211ENST00000561305 TIAM2Q8IVF5 1701 aa-2.76□□□□□ -2.85
CASC4-211ENST00000561305 COX6CP09669 75 aa-2.76□□□□□ -2.85
CASC4-211ENST00000561305 DEFB107AQ8IZN7 70 aa-2.76□□□□□ -2.85
CASC4-211ENST00000561305 GINS2Q9Y248 185 aa-2.76□□□□□ -2.85
CASC4-211ENST00000561305 TCHHQ07283 1943 aa-2.76□□□□□ -2.85
CASC4-211ENST00000561305 RGPD8O14715 1765 aaPredicted RBP-2.77□□□□□ -2.85
CASC4-211ENST00000561305 RGPD5Q99666 1765 aa-2.77□□□□□ -2.85
CASC4-211ENST00000561305 E5RI56 91 aa-2.77□□□□□ -2.85
CASC4-211ENST00000561305 K7ERU9 68 aa-2.77□□□□□ -2.85
CASC4-211ENST00000561305 TRAPPC2P0DI81 140 aa-2.77□□□□□ -2.85
CASC4-211ENST00000561305 TRAPPC2BP0DI82 140 aa-2.77□□□□□ -2.85
CASC4-211ENST00000561305 PSMG4Q5JS54 123 aa-2.77□□□□□ -2.85
CASC4-211ENST00000561305 DEFB106AQ8N104 65 aa-2.77□□□□□ -2.85
CASC4-211ENST00000561305 COPS9Q8WXC6 57 aa-2.77□□□□□ -2.85
CASC4-211ENST00000561305 DPH3Q96FX2 82 aa-2.77□□□□□ -2.85
CASC4-211ENST00000561305 PPP3R2Q96LZ3 170 aa-2.77□□□□□ -2.85
CASC4-211ENST00000561305 TSTD3H0UI37 97 aa-2.78□□□□□ -2.85
CASC4-211ENST00000561305 C3orf79P0CE67 100 aa-2.78□□□□□ -2.85
CASC4-211ENST00000561305 G0S2P27469 103 aa-2.78□□□□□ -2.85
CASC4-211ENST00000561305 SMCO1Q147U7 214 aa-2.78□□□□□ -2.85
CASC4-211ENST00000561305 SMIM21Q3B7S5 101 aa-2.78□□□□□ -2.85
CASC4-211ENST00000561305 Q56UQ5 140 aa-2.78□□□□□ -2.85
CASC4-211ENST00000561305 SFTA2Q6UW10 78 aa-2.78□□□□□ -2.85
CASC4-211ENST00000561305 PDCD10Q9BUL8 212 aa-2.78□□□□□ -2.85
CASC4-211ENST00000561305 SMIM3Q9BZL3 60 aa-2.78□□□□□ -2.85
CASC4-211ENST00000561305 SERP1Q9Y6X1 66 aa-2.78□□□□□ -2.85
CASC4-211ENST00000561305 FHAD1B1AJZ9 1412 aa-2.78□□□□□ -2.85
CASC4-211ENST00000561305 SAMD9Q5K651 1589 aa-2.78□□□□□ -2.86
CASC4-211ENST00000561305 SHPRHQ149N8 1683 aa-2.79□□□□□ -2.86
CASC4-211ENST00000561305 CSMD2Q7Z408 3487 aa-2.79□□□□□ -2.86
CASC4-211ENST00000561305 UBE2L3P68036 154 aaKnown RBP-2.79□□□□□ -2.86
CASC4-211ENST00000561305 TCEAL4Q96EI5 215 aa-2.79□□□□□ -2.86
CASC4-211ENST00000561305 DDA1Q9BW61 102 aa-2.79□□□□□ -2.86
CASC4-211ENST00000561305 CENPHQ9H3R5 247 aa-2.79□□□□□ -2.86
CASC4-211ENST00000561305 RERGLQ9H628 205 aa-2.79□□□□□ -2.86
CASC4-211ENST00000561305 SPANXA1Q9NS26 97 aa-2.79□□□□□ -2.86
CASC4-211ENST00000561305 CCDC167Q9P0B6 97 aa-2.79□□□□□ -2.86
CASC4-211ENST00000561305 MAGI2Q86UL8 1455 aa-2.79□□□□□ -2.86
CASC4-211ENST00000561305 TOP2BQ02880 1626 aa-2.79□□□□□ -2.86
CASC4-211ENST00000561305 TNRC6CQ9HCJ0 1690 aaKnown RBP-2.79□□□□□ -2.86
CASC4-211ENST00000561305 MMP24-AS1A0A0U1RRL7 71 aa-2.8□□□□□ -2.86
CASC4-211ENST00000561305 UBE2L5PA0A1B0GUS4 154 aa-2.8□□□□□ -2.86
CASC4-211ENST00000561305 F6UZH7 168 aa-2.8□□□□□ -2.86
CASC4-211ENST00000561305 M0R2Z0 102 aa-2.8□□□□□ -2.86
CASC4-211ENST00000561305 SCGB1A1P11684 91 aa-2.8□□□□□ -2.86
CASC4-211ENST00000561305 HSD52Q0P140 79 aa-2.8□□□□□ -2.86
CASC4-211ENST00000561305 Q0VG73 95 aa-2.8□□□□□ -2.86
CASC4-211ENST00000561305 MANBALQ9NQG1 85 aa-2.8□□□□□ -2.86
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms