RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 TP73-AS1Q9UF72 201 aa6.59□□□□□ -1.36
GABPB1-210ENST00000560825 IGLV5-37A0A075B6J1 123 aa6.58□□□□□ -1.36
GABPB1-210ENST00000560825 TMEM238C9JI98 176 aa6.58□□□□□ -1.36
GABPB1-210ENST00000560825 NUPR1O60356 82 aa6.58□□□□□ -1.36
GABPB1-210ENST00000560825 LBHQ53QV2 105 aaPredicted RBP6.58□□□□□ -1.36
GABPB1-210ENST00000560825 SND1-IT1Q9HBX3 110 aa6.58□□□□□ -1.36
GABPB1-210ENST00000560825 TSPAN13O95857 204 aa6.57□□□□□ -1.36
GABPB1-210ENST00000560825 HBDP02042 147 aa6.57□□□□□ -1.36
GABPB1-210ENST00000560825 VPREB1P12018 145 aa6.57□□□□□ -1.36
GABPB1-210ENST00000560825 COX19Q49B96 90 aa6.57□□□□□ -1.36
GABPB1-210ENST00000560825 PRLHP81277 87 aa6.56□□□□□ -1.36
GABPB1-210ENST00000560825 BAGE3Q86Y29 109 aa6.56□□□□□ -1.36
GABPB1-210ENST00000560825 ERG28Q9UKR5 140 aa6.56□□□□□ -1.36
GABPB1-210ENST00000560825 H3BRM9 83 aa6.54□□□□□ -1.36
GABPB1-210ENST00000560825 ATP5LO75964 103 aa6.54□□□□□ -1.36
GABPB1-210ENST00000560825 PRR4Q16378 134 aa6.54□□□□□ -1.36
GABPB1-210ENST00000560825 A0A0U1RRA0 63 aa6.53□□□□□ -1.36
GABPB1-210ENST00000560825 LINC01549A6NIU2 74 aa6.53□□□□□ -1.36
GABPB1-210ENST00000560825 RPL28P46779 137 aaKnown RBP6.53□□□□□ -1.36
GABPB1-210ENST00000560825 LINC00310P59036 64 aa6.53□□□□□ -1.36
GABPB1-210ENST00000560825 TMEM170BQ5T4T1 132 aa6.53□□□□□ -1.36
GABPB1-210ENST00000560825 CBLN2Q8IUK8 224 aa6.53□□□□□ -1.36
GABPB1-210ENST00000560825 M0R378 163 aa6.52□□□□□ -1.37
GABPB1-210ENST00000560825 FAM19A2Q8N3H0 131 aa6.52□□□□□ -1.37
GABPB1-210ENST00000560825 NKAPP1Q8N9T2 125 aa6.52□□□□□ -1.37
GABPB1-210ENST00000560825 TMEM223A0PJW6 202 aa6.51□□□□□ -1.37
GABPB1-210ENST00000560825 RPL13AP40429 203 aaKnown RBP6.51□□□□□ -1.37
GABPB1-210ENST00000560825 RETNLBQ9BQ08 111 aa6.51□□□□□ -1.37
GABPB1-210ENST00000560825 TMEM126AQ9H061 195 aa6.51□□□□□ -1.37
GABPB1-210ENST00000560825 CHTOPQ9Y3Y2 248 aaKnown RBP6.51□□□□□ -1.37
GABPB1-210ENST00000560825 SNAPINO95295 136 aa6.5□□□□□ -1.37
GABPB1-210ENST00000560825 LCE4AQ5TA78 99 aa6.5□□□□□ -1.37
GABPB1-210ENST00000560825 TYMSOSQ8TAI1 123 aa6.5□□□□□ -1.37
GABPB1-210ENST00000560825 UBE2AP49459 152 aa6.5□□□□□ -1.37
GABPB1-210ENST00000560825 SVBPQ8N300 66 aa6.5□□□□□ -1.37
GABPB1-210ENST00000560825 MUC17Q685J3 4493 aa6.49□□□□□ -1.37
GABPB1-210ENST00000560825 SMIM13P0DJ93 91 aa6.49□□□□□ -1.37
GABPB1-210ENST00000560825 CRYGAP11844 174 aa6.49□□□□□ -1.37
GABPB1-210ENST00000560825 TSPEAR-AS2P59090 65 aa6.49□□□□□ -1.37
GABPB1-210ENST00000560825 FAM19A1Q7Z5A9 133 aa6.49□□□□□ -1.37
GABPB1-210ENST00000560825 C3orf22Q8N5N4 141 aa6.49□□□□□ -1.37
GABPB1-210ENST00000560825 IFI27L1Q96BM0 104 aa6.49□□□□□ -1.37
GABPB1-210ENST00000560825 TRAV12-1A0A0B4J245 112 aa6.47□□□□□ -1.37
GABPB1-210ENST00000560825 TRGC2P03986 189 aa6.47□□□□□ -1.37
GABPB1-210ENST00000560825 LINC00158P58513 81 aa6.47□□□□□ -1.37
GABPB1-210ENST00000560825 COX17Q14061 63 aa6.47□□□□□ -1.37
GABPB1-210ENST00000560825 PLEKHB2Q96CS7 222 aa6.47□□□□□ -1.37
GABPB1-210ENST00000560825 H0Y8G0 127 aa6.46□□□□□ -1.38
GABPB1-210ENST00000560825 SLC7A5P1Q8MH63 180 aa6.46□□□□□ -1.38
GABPB1-210ENST00000560825 CHCHD1Q96BP2 118 aaKnown RBP6.46□□□□□ -1.38
GABPB1-210ENST00000560825 NCR3O14931 201 aa6.45□□□□□ -1.38
GABPB1-210ENST00000560825 DAND5Q8N907 189 aa6.45□□□□□ -1.38
GABPB1-210ENST00000560825 PMCHL2Q9BQD1 86 aa6.45□□□□□ -1.38
GABPB1-210ENST00000560825 SERF1AO75920 110 aa6.44□□□□□ -1.38
GABPB1-210ENST00000560825 KRTAP4-16G5E9R7 235 aaPredicted RBP6.43□□□□□ -1.38
GABPB1-210ENST00000560825 RPL24P83731 157 aaKnown RBP6.43□□□□□ -1.38
GABPB1-210ENST00000560825 NDUFA5Q16718 116 aa6.43□□□□□ -1.38
GABPB1-210ENST00000560825 FAM229BQ4G0N7 80 aa6.43□□□□□ -1.38
GABPB1-210ENST00000560825 MIR7-3HGQ8N6C7 128 aa6.43□□□□□ -1.38
GABPB1-210ENST00000560825 HIGD2AQ9BW72 106 aa6.43□□□□□ -1.38
GABPB1-210ENST00000560825 FAT4Q6V0I7 4981 aa6.43□□□□□ -1.38
GABPB1-210ENST00000560825 BOD1L2Q8IYS8 172 aa6.42□□□□□ -1.38
GABPB1-210ENST00000560825 LINC00304Q8N9R0 145 aa6.42□□□□□ -1.38
GABPB1-210ENST00000560825 HSBP1O75506 76 aa6.42□□□□□ -1.38
GABPB1-210ENST00000560825 SPRR4Q96PI1 79 aa6.42□□□□□ -1.38
GABPB1-210ENST00000560825 NDUFA12Q9UI09 145 aa6.42□□□□□ -1.38
GABPB1-210ENST00000560825 TRBV10-3A0A0K0K1G6 114 aa6.41□□□□□ -1.38
GABPB1-210ENST00000560825 COLCA2A8K830 154 aa6.41□□□□□ -1.38
GABPB1-210ENST00000560825 MEIG1Q5JSS6 88 aa6.41□□□□□ -1.38
GABPB1-210ENST00000560825 SMCR5Q8TEV8 140 aa6.41□□□□□ -1.38
GABPB1-210ENST00000560825 IGKV2D-26A0A0A0MRZ7 120 aa6.4□□□□□ -1.39
GABPB1-210ENST00000560825 ERC2-IT1O76042 136 aa6.4□□□□□ -1.39
GABPB1-210ENST00000560825 FABP4P15090 132 aa6.4□□□□□ -1.39
GABPB1-210ENST00000560825 SPRR1AP35321 89 aa6.4□□□□□ -1.39
GABPB1-210ENST00000560825 PPDPFQ9H3Y8 114 aa6.4□□□□□ -1.39
GABPB1-210ENST00000560825 LEPROTL1O95214 131 aa6.39□□□□□ -1.39
GABPB1-210ENST00000560825 SFTA2Q6UW10 78 aa6.38□□□□□ -1.39
GABPB1-210ENST00000560825 SOSTDC1Q6X4U4 206 aa6.38□□□□□ -1.39
GABPB1-210ENST00000560825 KCNQ1DNQ9H478 68 aa6.38□□□□□ -1.39
GABPB1-210ENST00000560825 LEPROTO15243 131 aa6.37□□□□□ -1.39
GABPB1-210ENST00000560825 KRTAP19-4Q3LI73 84 aa6.37□□□□□ -1.39
GABPB1-210ENST00000560825 ADAMTSL4-AS1Q5T5F5 129 aa6.37□□□□□ -1.39
GABPB1-210ENST00000560825 PRYO14603 147 aa6.36□□□□□ -1.39
GABPB1-210ENST00000560825 NPC2P61916 151 aa6.36□□□□□ -1.39
GABPB1-210ENST00000560825 Q9BRP9 147 aa6.36□□□□□ -1.39
GABPB1-210ENST00000560825 MYMXA0A1B0GTQ4 84 aa6.35□□□□□ -1.39
GABPB1-210ENST00000560825 TMEM238LA0A1B0GVL6 79 aa6.35□□□□□ -1.39
GABPB1-210ENST00000560825 B5MCH6 92 aa6.35□□□□□ -1.39
GABPB1-210ENST00000560825 J3QQQ9 107 aa6.35□□□□□ -1.39
GABPB1-210ENST00000560825 HERV-K104P63124 156 aa6.35□□□□□ -1.39
GABPB1-210ENST00000560825 LINC00337Q8N6G1 96 aa6.35□□□□□ -1.39
GABPB1-210ENST00000560825 Q8NBF4 154 aa6.35□□□□□ -1.39
GABPB1-210ENST00000560825 IGLV7-46A0A075B6I9 117 aa6.34□□□□□ -1.39
GABPB1-210ENST00000560825 LOC107984156A0A0G2JMH3 177 aa6.34□□□□□ -1.39
GABPB1-210ENST00000560825 ATP6V1G1O75348 118 aa6.34□□□□□ -1.39
GABPB1-210ENST00000560825 KRTAP5-3Q6L8H2 238 aa6.34□□□□□ -1.39
GABPB1-210ENST00000560825 ARL17AQ8IVW1 177 aa6.34□□□□□ -1.39
GABPB1-210ENST00000560825 DPM2O94777 84 aa6.33□□□□□ -1.4
GABPB1-210ENST00000560825 IGKCP01834 107 aa6.33□□□□□ -1.4
GABPB1-210ENST00000560825 PLNP26678 52 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms