RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 COX17Q14061 63 aa7.15□□□□□ -1.26
SNRPA1-211ENST00000560433 CBY1Q9Y3M2 126 aa7.15□□□□□ -1.27
SNRPA1-211ENST00000560433 VPS13DQ5THJ4 4388 aa7.14□□□□□ -1.27
SNRPA1-211ENST00000560433 GVQW2A0A096LPI5 108 aaPredicted RBP7.13□□□□□ -1.27
SNRPA1-211ENST00000560433 TRBV30A0A0K0K1B3 111 aa7.13□□□□□ -1.27
SNRPA1-211ENST00000560433 SYCNQ0VAF6 134 aa7.13□□□□□ -1.27
SNRPA1-211ENST00000560433 DNAH2Q9P225 4427 aa7.12□□□□□ -1.27
SNRPA1-211ENST00000560433 PSCAO43653 123 aa7.12□□□□□ -1.27
SNRPA1-211ENST00000560433 Q6ZRP5 223 aa7.12□□□□□ -1.27
SNRPA1-211ENST00000560433 TRAV13-2A0A0B4J235 113 aa7.12□□□□□ -1.27
SNRPA1-211ENST00000560433 SMIM11BQ8TCY0 68 aa7.12□□□□□ -1.27
SNRPA1-211ENST00000560433 RMI2Q96E14 147 aa7.11□□□□□ -1.27
SNRPA1-211ENST00000560433 C2orf48Q96LS8 159 aa7.11□□□□□ -1.27
SNRPA1-211ENST00000560433 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.1□□□□□ -1.27
SNRPA1-211ENST00000560433 SMCPP49901 116 aaPredicted RBP7.1□□□□□ -1.27
SNRPA1-211ENST00000560433 RPL18AQ02543 176 aaKnown RBP7.1□□□□□ -1.27
SNRPA1-211ENST00000560433 PRO0461Q9UI25 63 aa7.1□□□□□ -1.27
SNRPA1-211ENST00000560433 COX6CP09669 75 aa7.1□□□□□ -1.27
SNRPA1-211ENST00000560433 CARD19Q96LW7 228 aa7.1□□□□□ -1.27
SNRPA1-211ENST00000560433 NBDYA0A0U1RRE5 68 aa7.09□□□□□ -1.27
SNRPA1-211ENST00000560433 C9JAW5 83 aa7.09□□□□□ -1.27
SNRPA1-211ENST00000560433 ETDBQ3ZM63 59 aa7.09□□□□□ -1.27
SNRPA1-211ENST00000560433 LYRM7Q5U5X0 104 aa7.09□□□□□ -1.27
SNRPA1-211ENST00000560433 FAM218AQ96MZ4 157 aa7.09□□□□□ -1.27
SNRPA1-211ENST00000560433 TRBV20-1A0A075B6N2 111 aa7.09□□□□□ -1.27
SNRPA1-211ENST00000560433 NDUFC2-KCTD14E9PQ53 114 aa7.09□□□□□ -1.27
SNRPA1-211ENST00000560433 MUC7Q8TAX7 377 aa7.08□□□□□ -1.28
SNRPA1-211ENST00000560433 PPDPFQ9H3Y8 114 aa7.08□□□□□ -1.28
SNRPA1-211ENST00000560433 ATXN8Q156A1 80 aa7.08□□□□□ -1.28
SNRPA1-211ENST00000560433 F8W1H4 67 aa7.07□□□□□ -1.28
SNRPA1-211ENST00000560433 LINC01620Q4KN68 170 aa7.07□□□□□ -1.28
SNRPA1-211ENST00000560433 S100A7L2Q5SY68 101 aa7.07□□□□□ -1.28
SNRPA1-211ENST00000560433 C9orf129Q5T035 196 aaKnown RBP7.07□□□□□ -1.28
SNRPA1-211ENST00000560433 HYDINQ4G0P3 5121 aa7.07□□□□□ -1.28
SNRPA1-211ENST00000560433 NDUFC2O95298 119 aa7.07□□□□□ -1.28
SNRPA1-211ENST00000560433 FUSP35637 526 aaKnown RBP eCLIP7.07□□□□□ -1.28
SNRPA1-211ENST00000560433 RPL28P46779 137 aaKnown RBP7.07□□□□□ -1.28
SNRPA1-211ENST00000560433 GAGE2BQ13066 116 aa7.07□□□□□ -1.28
SNRPA1-211ENST00000560433 FAM168BA1KXE4 195 aa7.06□□□□□ -1.28
SNRPA1-211ENST00000560433 A0A087WYN8 130 aa7.06□□□□□ -1.28
SNRPA1-211ENST00000560433 LST1O00453 97 aa7.06□□□□□ -1.28
SNRPA1-211ENST00000560433 LY6G6CO95867 125 aa7.06□□□□□ -1.28
SNRPA1-211ENST00000560433 SLC25A20O43772 301 aa7.05□□□□□ -1.28
SNRPA1-211ENST00000560433 TRBV10-3A0A0K0K1G6 114 aa7.05□□□□□ -1.28
SNRPA1-211ENST00000560433 SERTAD4-AS1Q5TG53 156 aa7.05□□□□□ -1.28
SNRPA1-211ENST00000560433 VPREB1P12018 145 aa7.04□□□□□ -1.28
SNRPA1-211ENST00000560433 TMEM126AQ9H061 195 aa7.04□□□□□ -1.28
SNRPA1-211ENST00000560433 C6orf99Q4VX62 202 aa7.03□□□□□ -1.28
SNRPA1-211ENST00000560433 OCIAD2Q56VL3 154 aa7.03□□□□□ -1.28
SNRPA1-211ENST00000560433 IGKV2-24A0A0C4DH68 120 aa7.02□□□□□ -1.28
SNRPA1-211ENST00000560433 TTC32Q5I0X7 151 aa7.02□□□□□ -1.28
SNRPA1-211ENST00000560433 Q6ZRN7 208 aaPredicted RBP7.02□□□□□ -1.28
SNRPA1-211ENST00000560433 LRCOL1A6NCL2 159 aa7.01□□□□□ -1.29
SNRPA1-211ENST00000560433 ANKRD29Q8N6D5 301 aa7.01□□□□□ -1.29
SNRPA1-211ENST00000560433 WWC2-AS2Q96NR7 200 aa7.01□□□□□ -1.29
SNRPA1-211ENST00000560433 HECTD4Q9Y4D8 3996 aa7.01□□□□□ -1.29
SNRPA1-211ENST00000560433 IGLV6-57P01721 117 aa7.01□□□□□ -1.29
SNRPA1-211ENST00000560433 TRBV10-2A0A0K0K1G8 114 aa7□□□□□ -1.29
SNRPA1-211ENST00000560433 RNF151Q2KHN1 245 aa7□□□□□ -1.29
SNRPA1-211ENST00000560433 FAM19A5Q7Z5A7 132 aaPredicted RBP7□□□□□ -1.29
SNRPA1-211ENST00000560433 KRTAP7-1Q8IUC3 87 aa7□□□□□ -1.29
SNRPA1-211ENST00000560433 RPL37AP8A6NKH3 93 aa7□□□□□ -1.29
SNRPA1-211ENST00000560433 F8WDY8 70 aa7□□□□□ -1.29
SNRPA1-211ENST00000560433 A0A096LNI7 61 aa6.99□□□□□ -1.29
SNRPA1-211ENST00000560433 CHTF8P0CG12 524 aa6.99□□□□□ -1.29
SNRPA1-211ENST00000560433 TEX49A0A1B0GTD5 131 aa6.99□□□□□ -1.29
SNRPA1-211ENST00000560433 TLX1NBP0CAT3 122 aa6.99□□□□□ -1.29
SNRPA1-211ENST00000560433 TRAV23DV6A0A075B6W5 121 aa6.98□□□□□ -1.29
SNRPA1-211ENST00000560433 A0A1B0GV72 72 aa6.98□□□□□ -1.29
SNRPA1-211ENST00000560433 NKAPP1Q8N9T2 125 aa6.98□□□□□ -1.29
SNRPA1-211ENST00000560433 LOC107984640A0A0U1RRK4 108 aa6.98□□□□□ -1.29
SNRPA1-211ENST00000560433 M0R378 163 aa6.97□□□□□ -1.29
SNRPA1-211ENST00000560433 TEN1Q86WV5 123 aa6.97□□□□□ -1.29
SNRPA1-211ENST00000560433 C7orf33Q8WU49 177 aa6.97□□□□□ -1.29
SNRPA1-211ENST00000560433 H0YGX0 51 aa6.97□□□□□ -1.29
SNRPA1-211ENST00000560433 DNAL4O96015 105 aa6.97□□□□□ -1.29
SNRPA1-211ENST00000560433 BAALC-AS2P0C853 105 aa6.97□□□□□ -1.29
SNRPA1-211ENST00000560433 Q6ZR54 194 aa6.97□□□□□ -1.29
SNRPA1-211ENST00000560433 ZNF73O43830 326 aaPredicted RBP6.96□□□□□ -1.3
SNRPA1-211ENST00000560433 CNBPP62633 177 aaKnown RBP6.96□□□□□ -1.3
SNRPA1-211ENST00000560433 TRACP01848 142 aa6.96□□□□□ -1.3
SNRPA1-211ENST00000560433 LINC00476Q8WZB0 136 aa6.96□□□□□ -1.3
SNRPA1-211ENST00000560433 DNAH6Q9C0G6 4158 aa6.95□□□□□ -1.3
SNRPA1-211ENST00000560433 A0A1W2PNN7 141 aa6.95□□□□□ -1.3
SNRPA1-211ENST00000560433 K7ERU9 68 aa6.95□□□□□ -1.3
SNRPA1-211ENST00000560433 Q8N814 137 aa6.95□□□□□ -1.3
SNRPA1-211ENST00000560433 C22orf24Q9Y442 160 aa6.95□□□□□ -1.3
SNRPA1-211ENST00000560433 FRAS1Q86XX4 4008 aa6.95□□□□□ -1.3
SNRPA1-211ENST00000560433 DNAH17Q9UFH2 4485 aa6.94□□□□□ -1.3
SNRPA1-211ENST00000560433 A0A087WTM6 91 aa6.94□□□□□ -1.3
SNRPA1-211ENST00000560433 PANO1I0J062 215 aa6.94□□□□□ -1.3
SNRPA1-211ENST00000560433 C14orf177Q52M58 125 aa6.94□□□□□ -1.3
SNRPA1-211ENST00000560433 C4orf48Q5BLP8 95 aa6.94□□□□□ -1.3
SNRPA1-211ENST00000560433 DIRC1Q969H9 104 aa6.94□□□□□ -1.3
SNRPA1-211ENST00000560433 LINC00167Q96N53 147 aa6.94□□□□□ -1.3
SNRPA1-211ENST00000560433 H3BT86 120 aa6.93□□□□□ -1.3
SNRPA1-211ENST00000560433 C1orf134Q5TEV5 83 aa6.93□□□□□ -1.3
SNRPA1-211ENST00000560433 C16orf90A8MZG2 172 aa6.92□□□□□ -1.3
SNRPA1-211ENST00000560433 LINC00575Q6W349 94 aa6.92□□□□□ -1.3
SNRPA1-211ENST00000560433 C9orf163Q8N9P6 203 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 700.9 ms