RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 IGKV2-30P06310 120 aa3.98□□□□□ -1.77
SNRPA1-209ENST00000560307 PMAIP1Q13794 54 aa3.98□□□□□ -1.77
SNRPA1-209ENST00000560307 FAM229BQ4G0N7 80 aa3.98□□□□□ -1.77
SNRPA1-209ENST00000560307 CSNK1G2-AS1Q8NCQ2 148 aa3.98□□□□□ -1.77
SNRPA1-209ENST00000560307 TRIOBPQ9H2D6 2365 aa3.97□□□□□ -1.77
SNRPA1-209ENST00000560307 OTOGLQ3ZCN5 2332 aa3.97□□□□□ -1.77
SNRPA1-209ENST00000560307 GIG44P09565 113 aaPredicted RBP3.97□□□□□ -1.77
SNRPA1-209ENST00000560307 PRR3P79522 188 aaKnown RBP3.97□□□□□ -1.77
SNRPA1-209ENST00000560307 DEFB136Q30KP8 78 aa3.97□□□□□ -1.77
SNRPA1-209ENST00000560307 C18orf65Q6ZTR6 163 aa3.97□□□□□ -1.77
SNRPA1-209ENST00000560307 Q8NDZ9 215 aa3.97□□□□□ -1.77
SNRPA1-209ENST00000560307 ZCCHC13Q8WW36 166 aaKnown RBP3.97□□□□□ -1.77
SNRPA1-209ENST00000560307 CHCHD10Q8WYQ3 142 aaPredicted RBP3.97□□□□□ -1.77
SNRPA1-209ENST00000560307 HRNRQ86YZ3 2850 aaPredicted RBP3.97□□□□□ -1.77
SNRPA1-209ENST00000560307 NCOR1O75376 2440 aa3.96□□□□□ -1.77
SNRPA1-209ENST00000560307 EP300Q09472 2414 aaPredicted RBP3.96□□□□□ -1.77
SNRPA1-209ENST00000560307 ZNF73O43830 326 aaPredicted RBP3.96□□□□□ -1.78
SNRPA1-209ENST00000560307 SPAG11BQ08648 103 aa3.96□□□□□ -1.78
SNRPA1-209ENST00000560307 PRO0255Q9UI72 69 aa3.96□□□□□ -1.78
SNRPA1-209ENST00000560307 WDFY4Q6ZS81 3184 aa3.96□□□□□ -1.78
SNRPA1-209ENST00000560307 DCHS1Q96JQ0 3298 aa3.96□□□□□ -1.78
SNRPA1-209ENST00000560307 MAP1BP46821 2468 aaKnown RBP3.95□□□□□ -1.78
SNRPA1-209ENST00000560307 NDUFB1O75438 58 aa3.95□□□□□ -1.78
SNRPA1-209ENST00000560307 DAD1P61803 113 aa3.95□□□□□ -1.78
SNRPA1-209ENST00000560307 CD164Q04900 197 aa3.95□□□□□ -1.78
SNRPA1-209ENST00000560307 HIGD2BQ4VC39 106 aa3.95□□□□□ -1.78
SNRPA1-209ENST00000560307 KRTAP5-1Q6L8H4 278 aa3.95□□□□□ -1.78
SNRPA1-209ENST00000560307 SCXQ7RTU7 201 aa3.95□□□□□ -1.78
SNRPA1-209ENST00000560307 RP1L1Q8IWN7 2480 aaPredicted RBP3.95□□□□□ -1.78
SNRPA1-209ENST00000560307 TACC2O95359 2948 aa3.94□□□□□ -1.78
SNRPA1-209ENST00000560307 DCHS2Q6V1P9 2916 aa3.94□□□□□ -1.78
SNRPA1-209ENST00000560307 M0R378 163 aa3.94□□□□□ -1.78
SNRPA1-209ENST00000560307 REG3AQ06141 175 aa3.94□□□□□ -1.78
SNRPA1-209ENST00000560307 HIGD2AQ9BW72 106 aa3.94□□□□□ -1.78
SNRPA1-209ENST00000560307 IGLV5-48A0A075B6I7 105 aa3.93□□□□□ -1.78
SNRPA1-209ENST00000560307 ETDCA0A1B0GVM5 59 aa3.93□□□□□ -1.78
SNRPA1-209ENST00000560307 IGLV1-51P01701 117 aa3.93□□□□□ -1.78
SNRPA1-209ENST00000560307 Q6ZRP5 223 aa3.93□□□□□ -1.78
SNRPA1-209ENST00000560307 LINC00269Q8N2A0 174 aa3.93□□□□□ -1.78
SNRPA1-209ENST00000560307 LINC01006Q8NI28 216 aa3.93□□□□□ -1.78
SNRPA1-209ENST00000560307 PRAC1Q96KF2 57 aa3.93□□□□□ -1.78
SNRPA1-209ENST00000560307 LOC400499M0QZD8 3231 aa3.93□□□□□ -1.78
SNRPA1-209ENST00000560307 SPTBN1Q01082 2364 aaKnown RBP3.93□□□□□ -1.78
SNRPA1-209ENST00000560307 CR1P17927 2039 aa3.92□□□□□ -1.78
SNRPA1-209ENST00000560307 PTPRQQ9UMZ3 2332 aa3.92□□□□□ -1.78
SNRPA1-209ENST00000560307 CYSRT1A8MQ03 144 aa3.92□□□□□ -1.78
SNRPA1-209ENST00000560307 H3BPC8 53 aa3.92□□□□□ -1.78
SNRPA1-209ENST00000560307 ANGP03950 147 aaKnown RBP3.92□□□□□ -1.78
SNRPA1-209ENST00000560307 UBE2BP63146 152 aa3.92□□□□□ -1.78
SNRPA1-209ENST00000560307 C9orf116Q5BN46 136 aaPredicted RBP3.92□□□□□ -1.78
SNRPA1-209ENST00000560307 UNQ6190/PRO20217Q6UXQ8 127 aa3.92□□□□□ -1.78
SNRPA1-209ENST00000560307 C1orf64Q8NEQ6 169 aa3.92□□□□□ -1.78
SNRPA1-209ENST00000560307 PRR34Q9NV39 138 aa3.92□□□□□ -1.78
SNRPA1-209ENST00000560307 ADGRG4Q8IZF6 3080 aa3.92□□□□□ -1.78
SNRPA1-209ENST00000560307 BSNQ9UPA5 3926 aa3.92□□□□□ -1.78
SNRPA1-209ENST00000560307 SMG1Q96Q15 3661 aaKnown RBP3.91□□□□□ -1.78
SNRPA1-209ENST00000560307 KRTAP5-9P26371 169 aa3.91□□□□□ -1.78
SNRPA1-209ENST00000560307 EGFEM1PQ0D2K5 195 aa3.91□□□□□ -1.78
SNRPA1-209ENST00000560307 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
SNRPA1-209ENST00000560307 LELP1Q5T871 98 aa3.91□□□□□ -1.78
SNRPA1-209ENST00000560307 CLPSL2Q6UWE3 100 aa3.91□□□□□ -1.78
SNRPA1-209ENST00000560307 SMIM29Q86T20 159 aa3.91□□□□□ -1.78
SNRPA1-209ENST00000560307 ANKRD11Q6UB99 2663 aaPredicted RBP3.91□□□□□ -1.78
SNRPA1-209ENST00000560307 ACACAQ13085 2346 aa3.9□□□□□ -1.78
SNRPA1-209ENST00000560307 CACNA1HO95180 2353 aa3.9□□□□□ -1.78
SNRPA1-209ENST00000560307 COL6A6A6NMZ7 2263 aa3.9□□□□□ -1.79
SNRPA1-209ENST00000560307 UBE2AP49459 152 aa3.9□□□□□ -1.79
SNRPA1-209ENST00000560307 SPANXA2-OT1Q8N9U9 137 aa3.9□□□□□ -1.79
SNRPA1-209ENST00000560307 SPRR4Q96PI1 79 aa3.9□□□□□ -1.79
SNRPA1-209ENST00000560307 Q9BRP9 147 aa3.9□□□□□ -1.79
SNRPA1-209ENST00000560307 C6orf48Q9UBA6 75 aa3.9□□□□□ -1.79
SNRPA1-209ENST00000560307 LRBAP50851 2863 aa3.9□□□□□ -1.79
SNRPA1-209ENST00000560307 TRAV22A0A0B4J277 110 aa3.89□□□□□ -1.79
SNRPA1-209ENST00000560307 PSCAO43653 123 aa3.89□□□□□ -1.79
SNRPA1-209ENST00000560307 Q8NBF4 154 aa3.89□□□□□ -1.79
SNRPA1-209ENST00000560307 LIMD2Q9BT23 127 aa3.89□□□□□ -1.79
SNRPA1-209ENST00000560307 DHRS4-AS1Q9P1J3 65 aa3.89□□□□□ -1.79
SNRPA1-209ENST00000560307 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.88□□□□□ -1.79
SNRPA1-209ENST00000560307 NDUFS5O43920 106 aa3.88□□□□□ -1.79
SNRPA1-209ENST00000560307 DEFB130BP0DP73 79 aa3.88□□□□□ -1.79
SNRPA1-209ENST00000560307 DEFB130AP0DP74 79 aa3.88□□□□□ -1.79
SNRPA1-209ENST00000560307 KPRPQ5T749 579 aaPredicted RBP3.88□□□□□ -1.79
SNRPA1-209ENST00000560307 LCE1AQ5T7P2 110 aa3.88□□□□□ -1.79
SNRPA1-209ENST00000560307 KTN1-AS1Q86SY8 53 aa3.88□□□□□ -1.79
SNRPA1-209ENST00000560307 Q8N9L7 120 aa3.88□□□□□ -1.79
SNRPA1-209ENST00000560307 KRTAP1-5Q9BYS1 174 aa3.88□□□□□ -1.79
SNRPA1-209ENST00000560307 KCNQ1DNQ9H478 68 aa3.88□□□□□ -1.79
SNRPA1-209ENST00000560307 DMDP11532 3685 aa3.88□□□□□ -1.79
SNRPA1-209ENST00000560307 AKAP13Q12802 2813 aa3.88□□□□□ -1.79
SNRPA1-209ENST00000560307 IGLV10-54A0A075B6I4 117 aa3.87□□□□□ -1.79
SNRPA1-209ENST00000560307 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.87□□□□□ -1.79
SNRPA1-209ENST00000560307 HCG22E2RYF7 251 aa3.87□□□□□ -1.79
SNRPA1-209ENST00000560307 MRPL55Q7Z7F7 128 aaKnown RBP3.87□□□□□ -1.79
SNRPA1-209ENST00000560307 KLK12Q9UKR0 248 aa3.87□□□□□ -1.79
SNRPA1-209ENST00000560307 BOD1L1Q8NFC6 3051 aa3.86□□□□□ -1.79
SNRPA1-209ENST00000560307 MP68P56378 58 aa3.86□□□□□ -1.79
SNRPA1-209ENST00000560307 SYCNQ0VAF6 134 aa3.86□□□□□ -1.79
SNRPA1-209ENST00000560307 Q5VV11 94 aa3.86□□□□□ -1.79
SNRPA1-209ENST00000560307 Q8N377 158 aa3.86□□□□□ -1.79
SNRPA1-209ENST00000560307 CAMK2N2Q96S95 79 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms