RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 SNRPEP62304 92 aaKnown RBP7.64□□□□□ -1.19
TPM1-220ENST00000559556 FAM229BQ4G0N7 80 aa7.64□□□□□ -1.19
TPM1-220ENST00000559556 ERASQ7Z444 233 aa7.64□□□□□ -1.19
TPM1-220ENST00000559556 COX7B2Q8TF08 81 aa7.64□□□□□ -1.19
TPM1-220ENST00000559556 ANAPC11Q9NYG5 84 aa7.63□□□□□ -1.19
TPM1-220ENST00000559556 HSPB8Q9UJY1 196 aa7.63□□□□□ -1.19
TPM1-220ENST00000559556 GAGE10A6NGK3 116 aa7.62□□□□□ -1.19
TPM1-220ENST00000559556 ATP5LO75964 103 aa7.62□□□□□ -1.19
TPM1-220ENST00000559556 LINC00310P59036 64 aa7.62□□□□□ -1.19
TPM1-220ENST00000559556 NKAPP1Q8N9T2 125 aa7.62□□□□□ -1.19
TPM1-220ENST00000559556 LEPROTL1O95214 131 aa7.61□□□□□ -1.19
TPM1-220ENST00000559556 UBE2AP49459 152 aa7.61□□□□□ -1.19
TPM1-220ENST00000559556 HIST3H2BBQ8N257 126 aa7.61□□□□□ -1.19
TPM1-220ENST00000559556 LINC00304Q8N9R0 145 aa7.61□□□□□ -1.19
TPM1-220ENST00000559556 SCGB3A1Q96QR1 104 aa7.61□□□□□ -1.19
TPM1-220ENST00000559556 RETNLBQ9BQ08 111 aa7.61□□□□□ -1.19
TPM1-220ENST00000559556 TPRXLQ17RH7 258 aa7.6□□□□□ -1.19
TPM1-220ENST00000559556 FAM19A2Q8N3H0 131 aa7.6□□□□□ -1.19
TPM1-220ENST00000559556 SPINK8P0C7L1 97 aa7.59□□□□□ -1.19
TPM1-220ENST00000559556 CTAG1AP78358 180 aa7.59□□□□□ -1.19
TPM1-220ENST00000559556 PMCHL1Q16048 86 aa7.59□□□□□ -1.19
TPM1-220ENST00000559556 IGKV2-28A0A075B6P5 120 aa7.58□□□□□ -1.2
TPM1-220ENST00000559556 A0A096LNJ9 63 aa7.58□□□□□ -1.2
TPM1-220ENST00000559556 IGKV2D-28P01615 120 aa7.58□□□□□ -1.2
TPM1-220ENST00000559556 HIST1H2BLQ99880 126 aa7.58□□□□□ -1.2
TPM1-220ENST00000559556 MAP1LC3CQ9BXW4 147 aa7.58□□□□□ -1.2
TPM1-220ENST00000559556 CST9LQ9H4G1 147 aa7.58□□□□□ -1.2
TPM1-220ENST00000559556 FABP4P15090 132 aa7.57□□□□□ -1.2
TPM1-220ENST00000559556 IFI27L1Q96BM0 104 aa7.57□□□□□ -1.2
TPM1-220ENST00000559556 IGKV2D-26A0A0A0MRZ7 120 aa7.56□□□□□ -1.2
TPM1-220ENST00000559556 AKR1D1P51857 326 aa7.56□□□□□ -1.2
TPM1-220ENST00000559556 PRLHP81277 87 aa7.56□□□□□ -1.2
TPM1-220ENST00000559556 PMVKQ15126 192 aa7.56□□□□□ -1.2
TPM1-220ENST00000559556 CDIP1Q9H305 208 aa7.56□□□□□ -1.2
TPM1-220ENST00000559556 IGLV5-39A0A0G2JS06 123 aa7.55□□□□□ -1.2
TPM1-220ENST00000559556 H3BRM9 83 aa7.55□□□□□ -1.2
TPM1-220ENST00000559556 VPREB1P12018 145 aa7.55□□□□□ -1.2
TPM1-220ENST00000559556 TMEM126AQ9H061 195 aa7.55□□□□□ -1.2
TPM1-220ENST00000559556 IGLV7-46A0A075B6I9 117 aa7.54□□□□□ -1.2
TPM1-220ENST00000559556 PET117Q6UWS5 81 aa7.54□□□□□ -1.2
TPM1-220ENST00000559556 TRAV12-1A0A0B4J245 112 aa7.53□□□□□ -1.2
TPM1-220ENST00000559556 C20orf202A1L168 122 aa7.53□□□□□ -1.2
TPM1-220ENST00000559556 TMEM238C9JI98 176 aa7.53□□□□□ -1.2
TPM1-220ENST00000559556 IGLC3P0DOY3 106 aa7.53□□□□□ -1.2
TPM1-220ENST00000559556 PFN2P35080 140 aa7.53□□□□□ -1.2
TPM1-220ENST00000559556 FAM19A1Q7Z5A9 133 aa7.53□□□□□ -1.2
TPM1-220ENST00000559556 SND1-IT1Q9HBX3 110 aa7.53□□□□□ -1.2
TPM1-220ENST00000559556 SYS1-DBNDD2H3BUS1 97 aa7.52□□□□□ -1.21
TPM1-220ENST00000559556 M0R378 163 aa7.52□□□□□ -1.21
TPM1-220ENST00000559556 KRTDAPP60985 99 aa7.52□□□□□ -1.21
TPM1-220ENST00000559556 COX17Q14061 63 aa7.52□□□□□ -1.21
TPM1-220ENST00000559556 ERG28Q9UKR5 140 aa7.52□□□□□ -1.21
TPM1-220ENST00000559556 C3orf79P0CE67 100 aa7.51□□□□□ -1.21
TPM1-220ENST00000559556 RPL24P83731 157 aaKnown RBP7.51□□□□□ -1.21
TPM1-220ENST00000559556 C3orf22Q8N5N4 141 aa7.51□□□□□ -1.21
TPM1-220ENST00000559556 PLEKHB2Q96CS7 222 aa7.51□□□□□ -1.21
TPM1-220ENST00000559556 ZNF22P17026 224 aaPredicted RBP7.5□□□□□ -1.21
TPM1-220ENST00000559556 Q8NDZ9 215 aa7.5□□□□□ -1.21
TPM1-220ENST00000559556 LINC01545Q5VT33 79 aa7.49□□□□□ -1.21
TPM1-220ENST00000559556 PPDPFQ9H3Y8 114 aa7.49□□□□□ -1.21
TPM1-220ENST00000559556 CHTOPQ9Y3Y2 248 aaKnown RBP7.49□□□□□ -1.21
TPM1-220ENST00000559556 KRTAP9-6A0A140TA67 174 aa7.48□□□□□ -1.21
TPM1-220ENST00000559556 H0Y8G0 127 aa7.48□□□□□ -1.21
TPM1-220ENST00000559556 SCGB1D1O95968 90 aa7.48□□□□□ -1.21
TPM1-220ENST00000559556 PLNP26678 52 aa7.48□□□□□ -1.21
TPM1-220ENST00000559556 SPAG11AQ6PDA7 123 aa7.48□□□□□ -1.21
TPM1-220ENST00000559556 SFTA2Q6UW10 78 aa7.48□□□□□ -1.21
TPM1-220ENST00000559556 LOC105371267A0A1B0GV96 52 aa7.47□□□□□ -1.21
TPM1-220ENST00000559556 JOSD1Q15040 202 aaPredicted RBP7.47□□□□□ -1.21
TPM1-220ENST00000559556 HIGD2AQ9BW72 106 aa7.47□□□□□ -1.21
TPM1-220ENST00000559556 DPM2O94777 84 aa7.46□□□□□ -1.22
TPM1-220ENST00000559556 FP248Q71RG6 208 aaPredicted RBP7.46□□□□□ -1.22
TPM1-220ENST00000559556 ZNF625Q96I27 306 aaPredicted RBP7.46□□□□□ -1.22
TPM1-220ENST00000559556 SPRR4Q96PI1 79 aa7.46□□□□□ -1.22
TPM1-220ENST00000559556 IGKCP01834 107 aa7.45□□□□□ -1.22
TPM1-220ENST00000559556 C11orf86A6NJI1 115 aa7.44□□□□□ -1.22
TPM1-220ENST00000559556 HSBP1L1C9JCN9 74 aa7.43□□□□□ -1.22
TPM1-220ENST00000559556 KRTAP13-3Q3SY46 172 aa7.43□□□□□ -1.22
TPM1-220ENST00000559556 ZNF706Q9Y5V0 76 aaPredicted RBP7.43□□□□□ -1.22
TPM1-220ENST00000559556 SMIM6P0DI80 62 aa7.42□□□□□ -1.22
TPM1-220ENST00000559556 HERVK_113P61574 105 aa7.42□□□□□ -1.22
TPM1-220ENST00000559556 TMEM170BQ5T4T1 132 aa7.42□□□□□ -1.22
TPM1-220ENST00000559556 PRYO14603 147 aa7.41□□□□□ -1.22
TPM1-220ENST00000559556 ASB16-AS1Q495Z4 193 aa7.41□□□□□ -1.22
TPM1-220ENST00000559556 PYY3Q5JQD4 70 aa7.41□□□□□ -1.22
TPM1-220ENST00000559556 PMCHL2Q9BQD1 86 aa7.41□□□□□ -1.22
TPM1-220ENST00000559556 LINC00158P58513 81 aa7.4□□□□□ -1.22
TPM1-220ENST00000559556 S100A12P80511 92 aa7.4□□□□□ -1.22
TPM1-220ENST00000559556 C4orf48Q5BLP8 95 aa7.4□□□□□ -1.22
TPM1-220ENST00000559556 LINC00337Q8N6G1 96 aa7.4□□□□□ -1.22
TPM1-220ENST00000559556 Q8NBF4 154 aa7.4□□□□□ -1.22
TPM1-220ENST00000559556 SPRR1AP35321 89 aa7.39□□□□□ -1.23
TPM1-220ENST00000559556 KRTAP4-16G5E9R7 235 aaPredicted RBP7.38□□□□□ -1.23
TPM1-220ENST00000559556 SPINK1P00995 79 aa7.38□□□□□ -1.23
TPM1-220ENST00000559556 DAND5Q8N907 189 aa7.38□□□□□ -1.23
TPM1-220ENST00000559556 VAMP8Q9BV40 100 aa7.38□□□□□ -1.23
TPM1-220ENST00000559556 A0A0U1RRA0 63 aa7.37□□□□□ -1.23
TPM1-220ENST00000559556 TMEM223A0PJW6 202 aa7.37□□□□□ -1.23
TPM1-220ENST00000559556 LINC00483Q53H64 154 aa7.37□□□□□ -1.23
TPM1-220ENST00000559556 KCNQ1DNQ9H478 68 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms