RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 MRPL55Q7Z7F7 128 aaKnown RBP11.44□□□□□ -0.58
CASC4-209ENST00000559222 IGLV5-37A0A075B6J1 123 aa11.43□□□□□ -0.58
CASC4-209ENST00000559222 J3QL48 77 aa11.43□□□□□ -0.58
CASC4-209ENST00000559222 J3QQQ9 107 aa11.43□□□□□ -0.58
CASC4-209ENST00000559222 VPREB1P12018 145 aa11.43□□□□□ -0.58
CASC4-209ENST00000559222 PET117Q6UWS5 81 aa11.43□□□□□ -0.58
CASC4-209ENST00000559222 PLEKHB2Q96CS7 222 aa11.43□□□□□ -0.58
CASC4-209ENST00000559222 LINC00167Q96N53 147 aa11.43□□□□□ -0.58
CASC4-209ENST00000559222 RPL37AP8A6NKH3 93 aa11.42□□□□□ -0.58
CASC4-209ENST00000559222 IGLV7-43P04211 117 aa11.42□□□□□ -0.58
CASC4-209ENST00000559222 HERVK_113P61574 105 aa11.42□□□□□ -0.58
CASC4-209ENST00000559222 MEIG1Q5JSS6 88 aa11.42□□□□□ -0.58
CASC4-209ENST00000559222 TP73-AS1Q9UF72 201 aa11.42□□□□□ -0.58
CASC4-209ENST00000559222 OXTP01178 125 aa11.41□□□□□ -0.58
CASC4-209ENST00000559222 MT1HL1P0DM35 61 aa11.41□□□□□ -0.58
CASC4-209ENST00000559222 SPINK6Q6UWN8 80 aa11.41□□□□□ -0.58
CASC4-209ENST00000559222 MYMXA0A1B0GTQ4 84 aa11.4□□□□□ -0.58
CASC4-209ENST00000559222 HERV-K104P63124 156 aa11.4□□□□□ -0.58
CASC4-209ENST00000559222 HIST3H2BBQ8N257 126 aa11.4□□□□□ -0.58
CASC4-209ENST00000559222 MIR7-3HGQ8N6C7 128 aa11.4□□□□□ -0.58
CASC4-209ENST00000559222 E9PLD3 99 aa11.39□□□□□ -0.59
CASC4-209ENST00000559222 LBHQ53QV2 105 aaPredicted RBP11.39□□□□□ -0.59
CASC4-209ENST00000559222 LGALS3P17931 250 aaKnown RBP11.38□□□□□ -0.59
CASC4-209ENST00000559222 DAND5Q8N907 189 aa11.38□□□□□ -0.59
CASC4-209ENST00000559222 NKAPP1Q8N9T2 125 aa11.38□□□□□ -0.59
CASC4-209ENST00000559222 UBR4Q5T4S7 5183 aa11.38□□□□□ -0.59
CASC4-209ENST00000559222 TNXBP22105 4242 aa11.37□□□□□ -0.59
CASC4-209ENST00000559222 IGKV2D-26A0A0A0MRZ7 120 aa11.37□□□□□ -0.59
CASC4-209ENST00000559222 ATOH7Q8N100 152 aa11.36□□□□□ -0.59
CASC4-209ENST00000559222 HIST1H2BLQ99880 126 aa11.36□□□□□ -0.59
CASC4-209ENST00000559222 TTTY13Q9BZ97 58 aa11.36□□□□□ -0.59
CASC4-209ENST00000559222 IGKV2-28A0A075B6P5 120 aa11.35□□□□□ -0.59
CASC4-209ENST00000559222 IGKV2D-28P01615 120 aa11.35□□□□□ -0.59
CASC4-209ENST00000559222 NMUP48645 174 aa11.33□□□□□ -0.6
CASC4-209ENST00000559222 A0A0J9YXY3 114 aa11.32□□□□□ -0.6
CASC4-209ENST00000559222 ANKRD39Q53RE8 183 aa11.32□□□□□ -0.6
CASC4-209ENST00000559222 BOD1L2Q8IYS8 172 aa11.32□□□□□ -0.6
CASC4-209ENST00000559222 IGLV1-50A0A075B6I6 118 aa11.31□□□□□ -0.6
CASC4-209ENST00000559222 TMEM238C9JI98 176 aa11.31□□□□□ -0.6
CASC4-209ENST00000559222 H0Y9J4 135 aa11.31□□□□□ -0.6
CASC4-209ENST00000559222 NCR3O14931 201 aa11.31□□□□□ -0.6
CASC4-209ENST00000559222 EIF4EBP3O60516 100 aaPredicted RBP11.31□□□□□ -0.6
CASC4-209ENST00000559222 RPL24P83731 157 aaKnown RBP11.31□□□□□ -0.6
CASC4-209ENST00000559222 ADAMTSL4-AS1Q5T5F5 129 aa11.31□□□□□ -0.6
CASC4-209ENST00000559222 LINC01600Q96MT4 127 aa11.31□□□□□ -0.6
CASC4-209ENST00000559222 BCE1O60756 84 aa11.3□□□□□ -0.6
CASC4-209ENST00000559222 SNRPEP62304 92 aaKnown RBP11.3□□□□□ -0.6
CASC4-209ENST00000559222 SOSTDC1Q6X4U4 206 aa11.3□□□□□ -0.6
CASC4-209ENST00000559222 S100A2P29034 98 aa11.29□□□□□ -0.6
CASC4-209ENST00000559222 NPC2P61916 151 aa11.29□□□□□ -0.6
CASC4-209ENST00000559222 REG3GQ6UW15 175 aa11.29□□□□□ -0.6
CASC4-209ENST00000559222 DIRC1Q969H9 104 aa11.29□□□□□ -0.6
CASC4-209ENST00000559222 C20orf202A1L168 122 aa11.28□□□□□ -0.6
CASC4-209ENST00000559222 LINC00587B1AMM8 73 aa11.28□□□□□ -0.6
CASC4-209ENST00000559222 S100A6P06703 90 aa11.28□□□□□ -0.6
CASC4-209ENST00000559222 LITAFQ99732 161 aa11.28□□□□□ -0.6
CASC4-209ENST00000559222 ZNF861PO60384 105 aa11.27□□□□□ -0.61
CASC4-209ENST00000559222 KRTAP13-1Q8IUC0 172 aa11.27□□□□□ -0.61
CASC4-209ENST00000559222 ZNF815PA8K554 130 aa11.26□□□□□ -0.61
CASC4-209ENST00000559222 M0R378 163 aa11.26□□□□□ -0.61
CASC4-209ENST00000559222 KRTAP1-4P0C5Y4 121 aa11.26□□□□□ -0.61
CASC4-209ENST00000559222 LOC107984156A0A0G2JMH3 177 aa11.25□□□□□ -0.61
CASC4-209ENST00000559222 C5orf52A6NGY3 159 aa11.25□□□□□ -0.61
CASC4-209ENST00000559222 KRTAP10-8P60410 259 aa11.25□□□□□ -0.61
CASC4-209ENST00000559222 ARL17AQ8IVW1 177 aa11.25□□□□□ -0.61
CASC4-209ENST00000559222 TMEM126AQ9H061 195 aa11.25□□□□□ -0.61
CASC4-209ENST00000559222 PRLHP81277 87 aa11.24□□□□□ -0.61
CASC4-209ENST00000559222 PCP2Q8IVA1 136 aa11.22□□□□□ -0.61
CASC4-209ENST00000559222 PRR26Q8N8Z3 221 aa11.22□□□□□ -0.61
CASC4-209ENST00000559222 TRBV10-3A0A0K0K1G6 114 aa11.21□□□□□ -0.61
CASC4-209ENST00000559222 RPL28P46779 137 aaKnown RBP11.21□□□□□ -0.61
CASC4-209ENST00000559222 UBE2AP49459 152 aa11.21□□□□□ -0.61
CASC4-209ENST00000559222 FAM19A1Q7Z5A9 133 aa11.2□□□□□ -0.62
CASC4-209ENST00000559222 HMCN2Q8NDA2 5059 aa11.2□□□□□ -0.62
CASC4-209ENST00000559222 TIMM17BO60830 172 aa11.19□□□□□ -0.62
CASC4-209ENST00000559222 LINC00308Q8TCZ7 52 aa11.18□□□□□ -0.62
CASC4-209ENST00000559222 MIEN1Q9BRT3 115 aa11.18□□□□□ -0.62
CASC4-209ENST00000559222 PRYO14603 147 aa11.16□□□□□ -0.62
CASC4-209ENST00000559222 SPANXB1Q9NS25 103 aaPredicted RBP11.16□□□□□ -0.62
CASC4-209ENST00000559222 ANAPC11Q9NYG5 84 aa11.16□□□□□ -0.62
CASC4-209ENST00000559222 NDUFC2O95298 119 aa11.15□□□□□ -0.62
CASC4-209ENST00000559222 SPRR1AP35321 89 aa11.15□□□□□ -0.62
CASC4-209ENST00000559222 KCNQ1DNQ9H478 68 aa11.15□□□□□ -0.62
CASC4-209ENST00000559222 TRBV10-2A0A0K0K1G8 114 aa11.14□□□□□ -0.63
CASC4-209ENST00000559222 KRTAP4-16G5E9R7 235 aaPredicted RBP11.14□□□□□ -0.63
CASC4-209ENST00000559222 DDTP30046 118 aa11.14□□□□□ -0.63
CASC4-209ENST00000559222 SCGB1D4Q6XE38 83 aa11.13□□□□□ -0.63
CASC4-209ENST00000559222 A0A087X002 238 aa11.12□□□□□ -0.63
CASC4-209ENST00000559222 SCGB1D1O95968 90 aa11.12□□□□□ -0.63
CASC4-209ENST00000559222 AKR1D1P51857 326 aa11.12□□□□□ -0.63
CASC4-209ENST00000559222 SPANXDQ9BXN6 97 aa11.12□□□□□ -0.63
CASC4-209ENST00000559222 SPANXCQ9NY87 97 aa11.12□□□□□ -0.63
CASC4-209ENST00000559222 IGLV6-57P01721 117 aa11.11□□□□□ -0.63
CASC4-209ENST00000559222 HIGD2AQ9BW72 106 aa11.11□□□□□ -0.63
CASC4-209ENST00000559222 LINC00337Q8N6G1 96 aa11.09□□□□□ -0.63
CASC4-209ENST00000559222 S100A7L2Q5SY68 101 aa11.08□□□□□ -0.64
CASC4-209ENST00000559222 ETDCA0A1B0GVM5 59 aa11.07□□□□□ -0.64
CASC4-209ENST00000559222 TMA7Q9Y2S6 64 aaKnown RBP11.07□□□□□ -0.64
CASC4-209ENST00000559222 B5MCH6 92 aa11.06□□□□□ -0.64
CASC4-209ENST00000559222 HSBP1L1C9JCN9 74 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms