RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 M0QXV9 152 aa7.05□□□□□ -1.28
SNX1-204ENST00000559061 SNRPEP62304 92 aaKnown RBP7.05□□□□□ -1.28
SNX1-204ENST00000559061 NDUFA12Q9UI09 145 aa7.05□□□□□ -1.28
SNX1-204ENST00000559061 IGLV5-37A0A075B6J1 123 aa7.04□□□□□ -1.28
SNX1-204ENST00000559061 SMIM13P0DJ93 91 aa7.04□□□□□ -1.28
SNX1-204ENST00000559061 C7orf33Q8WU49 177 aa7.04□□□□□ -1.28
SNX1-204ENST00000559061 PLEKHB2Q96CS7 222 aa7.04□□□□□ -1.28
SNX1-204ENST00000559061 TTTY13Q9BZ97 58 aa7.04□□□□□ -1.28
SNX1-204ENST00000559061 PSORS1C2Q9UIG4 136 aa7.04□□□□□ -1.28
SNX1-204ENST00000559061 PLA2G2DQ9UNK4 145 aa7.04□□□□□ -1.28
SNX1-204ENST00000559061 C22orf24Q9Y442 160 aa7.04□□□□□ -1.28
SNX1-204ENST00000559061 A0A0U1RRA0 63 aa7.03□□□□□ -1.28
SNX1-204ENST00000559061 VPREB1P12018 145 aa7.03□□□□□ -1.28
SNX1-204ENST00000559061 COX17Q14061 63 aa7.03□□□□□ -1.28
SNX1-204ENST00000559061 ANKRD39Q53RE8 183 aa7.03□□□□□ -1.28
SNX1-204ENST00000559061 SFTA2Q6UW10 78 aa7.03□□□□□ -1.28
SNX1-204ENST00000559061 ATOH7Q8N100 152 aa7.03□□□□□ -1.28
SNX1-204ENST00000559061 EIF4EBP3O60516 100 aaPredicted RBP7.02□□□□□ -1.29
SNX1-204ENST00000559061 HERVK_113P61574 105 aa7.01□□□□□ -1.29
SNX1-204ENST00000559061 HERV-K104P63124 156 aa7.01□□□□□ -1.29
SNX1-204ENST00000559061 SRSF9Q13242 221 aaKnown RBP eCLIP7.01□□□□□ -1.29
SNX1-204ENST00000559061 LITAFQ99732 161 aa7.01□□□□□ -1.29
SNX1-204ENST00000559061 TP73-AS1Q9UF72 201 aa7.01□□□□□ -1.29
SNX1-204ENST00000559061 TNXBP22105 4242 aa7.01□□□□□ -1.29
SNX1-204ENST00000559061 MYMXA0A1B0GTQ4 84 aa7□□□□□ -1.29
SNX1-204ENST00000559061 MIR7-3HGQ8N6C7 128 aa7□□□□□ -1.29
SNX1-204ENST00000559061 DAND5Q8N907 189 aa7□□□□□ -1.29
SNX1-204ENST00000559061 LINC00167Q96N53 147 aa7□□□□□ -1.29
SNX1-204ENST00000559061 A0A0J9YXY3 114 aa6.99□□□□□ -1.29
SNX1-204ENST00000559061 S100A6P06703 90 aa6.99□□□□□ -1.29
SNX1-204ENST00000559061 LGALS3P17931 250 aaKnown RBP6.99□□□□□ -1.29
SNX1-204ENST00000559061 NMUP48645 174 aa6.99□□□□□ -1.29
SNX1-204ENST00000559061 LINC00158P58513 81 aa6.99□□□□□ -1.29
SNX1-204ENST00000559061 ADAMTSL4-AS1Q5T5F5 129 aa6.99□□□□□ -1.29
SNX1-204ENST00000559061 SOSTDC1Q6X4U4 206 aa6.99□□□□□ -1.29
SNX1-204ENST00000559061 MRPL55Q7Z7F7 128 aaKnown RBP6.99□□□□□ -1.29
SNX1-204ENST00000559061 S100A2P29034 98 aa6.98□□□□□ -1.29
SNX1-204ENST00000559061 MEIG1Q5JSS6 88 aa6.98□□□□□ -1.29
SNX1-204ENST00000559061 LOC107984156A0A0G2JMH3 177 aa6.97□□□□□ -1.29
SNX1-204ENST00000559061 GAGE10A6NGK3 116 aa6.97□□□□□ -1.29
SNX1-204ENST00000559061 RPL37AP8A6NKH3 93 aa6.97□□□□□ -1.29
SNX1-204ENST00000559061 C1orf137Q5JT78 98 aa6.97□□□□□ -1.29
SNX1-204ENST00000559061 ARL17AQ8IVW1 177 aa6.97□□□□□ -1.29
SNX1-204ENST00000559061 HERC1Q15751 4861 aa6.97□□□□□ -1.29
SNX1-204ENST00000559061 C20orf202A1L168 122 aa6.96□□□□□ -1.3
SNX1-204ENST00000559061 IGLV7-43P04211 117 aa6.96□□□□□ -1.3
SNX1-204ENST00000559061 MT1HL1P0DM35 61 aa6.96□□□□□ -1.3
SNX1-204ENST00000559061 PCP2Q8IVA1 136 aa6.96□□□□□ -1.3
SNX1-204ENST00000559061 KRTAP29-1A8MX34 341 aaPredicted RBP6.95□□□□□ -1.3
SNX1-204ENST00000559061 UBE2BP63146 152 aa6.95□□□□□ -1.3
SNX1-204ENST00000559061 IGLV1-50A0A075B6I6 118 aa6.94□□□□□ -1.3
SNX1-204ENST00000559061 ZNF815PA8K554 130 aa6.94□□□□□ -1.3
SNX1-204ENST00000559061 KRTAP13-1Q8IUC0 172 aa6.94□□□□□ -1.3
SNX1-204ENST00000559061 IGKV2-28A0A075B6P5 120 aa6.93□□□□□ -1.3
SNX1-204ENST00000559061 TMEM238C9JI98 176 aa6.93□□□□□ -1.3
SNX1-204ENST00000559061 IGKV2D-28P01615 120 aa6.93□□□□□ -1.3
SNX1-204ENST00000559061 LBHQ53QV2 105 aaPredicted RBP6.93□□□□□ -1.3
SNX1-204ENST00000559061 SPINK6Q6UWN8 80 aa6.93□□□□□ -1.3
SNX1-204ENST00000559061 BOD1L2Q8IYS8 172 aa6.93□□□□□ -1.3
SNX1-204ENST00000559061 NKAPP1Q8N9T2 125 aa6.93□□□□□ -1.3
SNX1-204ENST00000559061 LINC00587B1AMM8 73 aa6.92□□□□□ -1.3
SNX1-204ENST00000559061 M0R378 163 aa6.92□□□□□ -1.3
SNX1-204ENST00000559061 NCR3O14931 201 aa6.92□□□□□ -1.3
SNX1-204ENST00000559061 TIMM17BO60830 172 aa6.92□□□□□ -1.3
SNX1-204ENST00000559061 NPC2P61916 151 aa6.92□□□□□ -1.3
SNX1-204ENST00000559061 BCE1O60756 84 aa6.91□□□□□ -1.3
SNX1-204ENST00000559061 RPL24P83731 157 aaKnown RBP6.91□□□□□ -1.3
SNX1-204ENST00000559061 TMA7Q9Y2S6 64 aaKnown RBP6.91□□□□□ -1.3
SNX1-204ENST00000559061 KRTAP1-4P0C5Y4 121 aa6.9□□□□□ -1.3
SNX1-204ENST00000559061 LINC00308Q8TCZ7 52 aa6.9□□□□□ -1.3
SNX1-204ENST00000559061 OXTP01178 125 aa6.89□□□□□ -1.31
SNX1-204ENST00000559061 TMEM126AQ9H061 195 aa6.89□□□□□ -1.31
SNX1-204ENST00000559061 DMBT1Q9UGM3 2413 aaPredicted RBP6.89□□□□□ -1.31
SNX1-204ENST00000559061 TRBV10-3A0A0K0K1G6 114 aa6.88□□□□□ -1.31
SNX1-204ENST00000559061 KRTAP4-16G5E9R7 235 aaPredicted RBP6.88□□□□□ -1.31
SNX1-204ENST00000559061 H0Y9J4 135 aa6.88□□□□□ -1.31
SNX1-204ENST00000559061 ZNF861PO60384 105 aa6.88□□□□□ -1.31
SNX1-204ENST00000559061 SCGB1D1O95968 90 aa6.88□□□□□ -1.31
SNX1-204ENST00000559061 SPRR1AP35321 89 aa6.88□□□□□ -1.31
SNX1-204ENST00000559061 AKR1D1P51857 326 aa6.88□□□□□ -1.31
SNX1-204ENST00000559061 LINC01600Q96MT4 127 aa6.88□□□□□ -1.31
SNX1-204ENST00000559061 SPANXDQ9BXN6 97 aa6.88□□□□□ -1.31
SNX1-204ENST00000559061 SPANXCQ9NY87 97 aa6.88□□□□□ -1.31
SNX1-204ENST00000559061 NDUFC2O95298 119 aa6.87□□□□□ -1.31
SNX1-204ENST00000559061 JOSD1Q15040 202 aaPredicted RBP6.87□□□□□ -1.31
SNX1-204ENST00000559061 TRBV10-2A0A0K0K1G8 114 aa6.86□□□□□ -1.31
SNX1-204ENST00000559061 IGLV6-57P01721 117 aa6.86□□□□□ -1.31
SNX1-204ENST00000559061 PRLHP81277 87 aa6.86□□□□□ -1.31
SNX1-204ENST00000559061 PYY3Q5JQD4 70 aa6.86□□□□□ -1.31
SNX1-204ENST00000559061 REG3GQ6UW15 175 aa6.86□□□□□ -1.31
SNX1-204ENST00000559061 KCNQ1DNQ9H478 68 aa6.86□□□□□ -1.31
SNX1-204ENST00000559061 SPANXB1Q9NS25 103 aaPredicted RBP6.86□□□□□ -1.31
SNX1-204ENST00000559061 KRTAP10-8P60410 259 aa6.85□□□□□ -1.31
SNX1-204ENST00000559061 DIRC1Q969H9 104 aa6.85□□□□□ -1.31
SNX1-204ENST00000559061 PRYO14603 147 aa6.84□□□□□ -1.31
SNX1-204ENST00000559061 SCGB1D4Q6XE38 83 aa6.84□□□□□ -1.31
SNX1-204ENST00000559061 LINC00337Q8N6G1 96 aa6.84□□□□□ -1.31
SNX1-204ENST00000559061 COX8AP10176 69 aa6.83□□□□□ -1.32
SNX1-204ENST00000559061 MIEN1Q9BRT3 115 aa6.83□□□□□ -1.32
SNX1-204ENST00000559061 PPDPFQ9H3Y8 114 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms