RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 KMT2CQ8NEZ4 4911 aaKnown RBP10.6□□□□□ -0.71
CDC42BPB-204ENST00000559043 KIAA0087Q14695 138 aa10.6□□□□□ -0.71
CDC42BPB-204ENST00000559043 SACSQ9NZJ4 4579 aa10.59□□□□□ -0.71
CDC42BPB-204ENST00000559043 SCGB1A1P11684 91 aa10.59□□□□□ -0.71
CDC42BPB-204ENST00000559043 LCE6AA0A183 80 aa10.58□□□□□ -0.72
CDC42BPB-204ENST00000559043 TEX49A0A1B0GTD5 131 aa10.58□□□□□ -0.72
CDC42BPB-204ENST00000559043 M0R2N4 97 aa10.58□□□□□ -0.72
CDC42BPB-204ENST00000559043 UBE2WQ96B02 151 aa10.58□□□□□ -0.72
CDC42BPB-204ENST00000559043 KLK12Q9UKR0 248 aa10.58□□□□□ -0.72
CDC42BPB-204ENST00000559043 TRACP01848 142 aa10.57□□□□□ -0.72
CDC42BPB-204ENST00000559043 CXCL5P42830 114 aa10.57□□□□□ -0.72
CDC42BPB-204ENST00000559043 PRR34Q9NV39 138 aa10.57□□□□□ -0.72
CDC42BPB-204ENST00000559043 IGLV10-54A0A075B6I4 117 aa10.56□□□□□ -0.72
CDC42BPB-204ENST00000559043 NBDYA0A0U1RRE5 68 aa10.56□□□□□ -0.72
CDC42BPB-204ENST00000559043 CKS1BP61024 79 aa10.56□□□□□ -0.72
CDC42BPB-204ENST00000559043 ENHOQ6UWT2 76 aa10.56□□□□□ -0.72
CDC42BPB-204ENST00000559043 DNAH6Q9C0G6 4158 aa10.56□□□□□ -0.72
CDC42BPB-204ENST00000559043 COX17Q14061 63 aa10.56□□□□□ -0.72
CDC42BPB-204ENST00000559043 Q6ZR54 194 aa10.56□□□□□ -0.72
CDC42BPB-204ENST00000559043 MALP21145 153 aa10.54□□□□□ -0.72
CDC42BPB-204ENST00000559043 CFAP161Q6P656 301 aa10.54□□□□□ -0.72
CDC42BPB-204ENST00000559043 SMIM11BQ8TCY0 68 aa10.54□□□□□ -0.72
CDC42BPB-204ENST00000559043 FAM218AQ96MZ4 157 aa10.54□□□□□ -0.72
CDC42BPB-204ENST00000559043 XGP55808 180 aa10.52□□□□□ -0.72
CDC42BPB-204ENST00000559043 TRAV8-4A0A0B4J246 113 aa10.5□□□□□ -0.73
CDC42BPB-204ENST00000559043 MT-ATP8P03928 68 aa10.5□□□□□ -0.73
CDC42BPB-204ENST00000559043 Q9HAA7 133 aa10.5□□□□□ -0.73
CDC42BPB-204ENST00000559043 H0YGX0 51 aa10.5□□□□□ -0.73
CDC42BPB-204ENST00000559043 NDUFC2O95298 119 aa10.5□□□□□ -0.73
CDC42BPB-204ENST00000559043 RYR2Q92736 4967 aa10.5□□□□□ -0.73
CDC42BPB-204ENST00000559043 DNAH10Q8IVF4 4471 aa10.49□□□□□ -0.73
CDC42BPB-204ENST00000559043 TTC32Q5I0X7 151 aa10.48□□□□□ -0.73
CDC42BPB-204ENST00000559043 DNAH2Q9P225 4427 aa10.48□□□□□ -0.73
CDC42BPB-204ENST00000559043 BAALC-AS2P0C853 105 aa10.48□□□□□ -0.73
CDC42BPB-204ENST00000559043 KRTAP26-1Q6PEX3 210 aa10.48□□□□□ -0.73
CDC42BPB-204ENST00000559043 C22orf24Q9Y442 160 aa10.48□□□□□ -0.73
CDC42BPB-204ENST00000559043 FAM240AA0A1B0GVK7 77 aa10.47□□□□□ -0.73
CDC42BPB-204ENST00000559043 SPAG11BQ08648 103 aa10.47□□□□□ -0.73
CDC42BPB-204ENST00000559043 C9orf116Q5BN46 136 aaPredicted RBP10.46□□□□□ -0.73
CDC42BPB-204ENST00000559043 Q6ZRN7 208 aaPredicted RBP10.46□□□□□ -0.73
CDC42BPB-204ENST00000559043 OR13C6PQ8NH95 151 aa10.46□□□□□ -0.73
CDC42BPB-204ENST00000559043 A0A087WYN8 130 aa10.45□□□□□ -0.74
CDC42BPB-204ENST00000559043 C10orf25Q5T742 122 aa10.45□□□□□ -0.74
CDC42BPB-204ENST00000559043 UNQ6190/PRO20217Q6UXQ8 127 aa10.45□□□□□ -0.74
CDC42BPB-204ENST00000559043 C6orf223Q8N319 242 aa10.45□□□□□ -0.74
CDC42BPB-204ENST00000559043 IGKV2D-24A0A075B6R9 120 aa10.43□□□□□ -0.74
CDC42BPB-204ENST00000559043 GVQW2A0A096LPI5 108 aaPredicted RBP10.43□□□□□ -0.74
CDC42BPB-204ENST00000559043 PRR3P79522 188 aaKnown RBP10.43□□□□□ -0.74
CDC42BPB-204ENST00000559043 RYR3Q15413 4870 aa10.42□□□□□ -0.74
CDC42BPB-204ENST00000559043 FRAS1Q86XX4 4008 aa10.42□□□□□ -0.74
CDC42BPB-204ENST00000559043 C1orf134Q5TEV5 83 aa10.42□□□□□ -0.74
CDC42BPB-204ENST00000559043 TMEM126AQ9H061 195 aa10.42□□□□□ -0.74
CDC42BPB-204ENST00000559043 RTL8CO15255 209 aa10.41□□□□□ -0.74
CDC42BPB-204ENST00000559043 DNAL4O96015 105 aa10.41□□□□□ -0.74
CDC42BPB-204ENST00000559043 Q8NDZ9 215 aa10.41□□□□□ -0.74
CDC42BPB-204ENST00000559043 LINC00526Q96FQ7 95 aa10.41□□□□□ -0.74
CDC42BPB-204ENST00000559043 C1orf43Q9BWL3 253 aa10.41□□□□□ -0.74
CDC42BPB-204ENST00000559043 LECT2O14960 151 aa10.39□□□□□ -0.75
CDC42BPB-204ENST00000559043 ACYP1P07311 99 aa10.39□□□□□ -0.75
CDC42BPB-204ENST00000559043 A0A1B0GX51 115 aa10.37□□□□□ -0.75
CDC42BPB-204ENST00000559043 SNCGO76070 127 aa10.37□□□□□ -0.75
CDC42BPB-204ENST00000559043 INAFM2P0DMQ5 153 aa10.37□□□□□ -0.75
CDC42BPB-204ENST00000559043 LINC00167Q96N53 147 aa10.37□□□□□ -0.75
CDC42BPB-204ENST00000559043 C6orf48Q9UBA6 75 aa10.37□□□□□ -0.75
CDC42BPB-204ENST00000559043 DNAH17Q9UFH2 4485 aa10.37□□□□□ -0.75
CDC42BPB-204ENST00000559043 RMI2Q96E14 147 aa10.36□□□□□ -0.75
CDC42BPB-204ENST00000559043 LRCOL1A6NCL2 159 aa10.35□□□□□ -0.75
CDC42BPB-204ENST00000559043 NCR3O14931 201 aa10.35□□□□□ -0.75
CDC42BPB-204ENST00000559043 OBSCN-AS1Q96MR7 158 aa10.35□□□□□ -0.75
CDC42BPB-204ENST00000559043 PSCAO43653 123 aa10.34□□□□□ -0.75
CDC42BPB-204ENST00000559043 TNP2Q05952 138 aa10.34□□□□□ -0.75
CDC42BPB-204ENST00000559043 Q6Q795 121 aa10.34□□□□□ -0.75
CDC42BPB-204ENST00000559043 FAT2Q9NYQ8 4349 aa10.34□□□□□ -0.75
CDC42BPB-204ENST00000559043 S100A7L2Q5SY68 101 aa10.33□□□□□ -0.76
CDC42BPB-204ENST00000559043 Q8N814 137 aa10.33□□□□□ -0.76
CDC42BPB-204ENST00000559043 ORMDL1Q9P0S3 153 aa10.33□□□□□ -0.76
CDC42BPB-204ENST00000559043 ZNF561-AS1K7EIQ3 104 aa10.32□□□□□ -0.76
CDC42BPB-204ENST00000559043 IGLV6-57P01721 117 aa10.32□□□□□ -0.76
CDC42BPB-204ENST00000559043 GAGE2BQ13066 116 aa10.32□□□□□ -0.76
CDC42BPB-204ENST00000559043 GAGE2EQ4V326 116 aa10.32□□□□□ -0.76
CDC42BPB-204ENST00000559043 SDIM1Q6ZPB5 146 aa10.32□□□□□ -0.76
CDC42BPB-204ENST00000559043 C15orf56Q8N910 161 aa10.32□□□□□ -0.76
CDC42BPB-204ENST00000559043 GAGE2DQ9UEU5 116 aa10.32□□□□□ -0.76
CDC42BPB-204ENST00000559043 C9orf129Q5T035 196 aaKnown RBP10.32□□□□□ -0.76
CDC42BPB-204ENST00000559043 USP17L23D6RBM5 183 aa10.31□□□□□ -0.76
CDC42BPB-204ENST00000559043 SLPIP03973 132 aa10.31□□□□□ -0.76
CDC42BPB-204ENST00000559043 HIGD2BQ4VC39 106 aa10.31□□□□□ -0.76
CDC42BPB-204ENST00000559043 C6orf99Q4VX62 202 aa10.31□□□□□ -0.76
CDC42BPB-204ENST00000559043 C2orf48Q96LS8 159 aa10.31□□□□□ -0.76
CDC42BPB-204ENST00000559043 A0A1B0GV72 72 aa10.3□□□□□ -0.76
CDC42BPB-204ENST00000559043 CAMK2N2Q96S95 79 aa10.3□□□□□ -0.76
CDC42BPB-204ENST00000559043 A0A087WTM6 91 aa10.3□□□□□ -0.76
CDC42BPB-204ENST00000559043 F8WDY8 70 aa10.28□□□□□ -0.76
CDC42BPB-204ENST00000559043 RPL18AQ02543 176 aaKnown RBP10.28□□□□□ -0.76
CDC42BPB-204ENST00000559043 FUSP35637 526 aaKnown RBP eCLIP10.28□□□□□ -0.76
CDC42BPB-204ENST00000559043 LINC00575Q6W349 94 aa10.28□□□□□ -0.76
CDC42BPB-204ENST00000559043 Q6ZRU5 148 aa10.28□□□□□ -0.76
CDC42BPB-204ENST00000559043 SMCR5Q8TEV8 140 aa10.28□□□□□ -0.76
CDC42BPB-204ENST00000559043 TRBV7-7A0A0K0K1E9 115 aa10.27□□□□□ -0.77
CDC42BPB-204ENST00000559043 XAGE1AQ9HD64 81 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms