RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 LINC00336Q6ZUF6 198 aa3.54□□□□□ -1.84
HMG20A-204ENST00000558288 C1orf158Q8N1D5 194 aa3.54□□□□□ -1.84
HMG20A-204ENST00000558288 RMI2Q96E14 147 aa3.54□□□□□ -1.84
HMG20A-204ENST00000558288 IGHV3OR16-9A0A0B4J2B5 98 aa3.53□□□□□ -1.84
HMG20A-204ENST00000558288 F8WEM9 126 aa3.53□□□□□ -1.84
HMG20A-204ENST00000558288 VWFP04275 2813 aa3.53□□□□□ -1.84
HMG20A-204ENST00000558288 TRAV7A0A075B6U4 112 aa3.53□□□□□ -1.84
HMG20A-204ENST00000558288 H7BZZ5 65 aa3.53□□□□□ -1.84
HMG20A-204ENST00000558288 OXLD1Q5BKU9 147 aa3.53□□□□□ -1.84
HMG20A-204ENST00000558288 PRO0628Q9UI54 55 aa3.53□□□□□ -1.84
HMG20A-204ENST00000558288 ANK3Q12955 4377 aaKnown RBP3.53□□□□□ -1.84
HMG20A-204ENST00000558288 A0A087WZ39 114 aa3.53□□□□□ -1.84
HMG20A-204ENST00000558288 C6orf99Q4VX62 202 aa3.53□□□□□ -1.84
HMG20A-204ENST00000558288 TRAV10A0A0B4J240 114 aa3.52□□□□□ -1.85
HMG20A-204ENST00000558288 A8MTW9 85 aa3.52□□□□□ -1.85
HMG20A-204ENST00000558288 RPL35AP18077 110 aaKnown RBP3.52□□□□□ -1.85
HMG20A-204ENST00000558288 SCXQ7RTU7 201 aa3.52□□□□□ -1.85
HMG20A-204ENST00000558288 DEFB114Q30KQ6 69 aa3.52□□□□□ -1.85
HMG20A-204ENST00000558288 BRK1Q8WUW1 75 aa3.52□□□□□ -1.85
HMG20A-204ENST00000558288 TRBV6-8A0A0A6YYG3 113 aa3.52□□□□□ -1.85
HMG20A-204ENST00000558288 TRBV10-3A0A0K0K1G6 114 aa3.52□□□□□ -1.85
HMG20A-204ENST00000558288 LINC00959A0A1B0GUT2 108 aa3.52□□□□□ -1.85
HMG20A-204ENST00000558288 ODF3L2Q3SX64 289 aa3.52□□□□□ -1.85
HMG20A-204ENST00000558288 LINC01006Q8NI28 216 aa3.52□□□□□ -1.85
HMG20A-204ENST00000558288 ZNF702PQ9H963 129 aa3.52□□□□□ -1.85
HMG20A-204ENST00000558288 SMIM26A0A096LP01 95 aa3.51□□□□□ -1.85
HMG20A-204ENST00000558288 A0A0U1RQV1 116 aa3.51□□□□□ -1.85
HMG20A-204ENST00000558288 LINC01547P58512 204 aaPredicted RBP3.51□□□□□ -1.85
HMG20A-204ENST00000558288 A0A096LPF7 62 aa3.51□□□□□ -1.85
HMG20A-204ENST00000558288 M0R2N4 97 aa3.51□□□□□ -1.85
HMG20A-204ENST00000558288 C9orf116Q5BN46 136 aaPredicted RBP3.51□□□□□ -1.85
HMG20A-204ENST00000558288 Q6ZVQ6 151 aa3.51□□□□□ -1.85
HMG20A-204ENST00000558288 LINC00474Q9P2X8 69 aa3.51□□□□□ -1.85
HMG20A-204ENST00000558288 NANOS2P60321 138 aaKnown RBP3.5□□□□□ -1.85
HMG20A-204ENST00000558288 LYPD5Q6UWN5 251 aa3.5□□□□□ -1.85
HMG20A-204ENST00000558288 Q6ZQT0 140 aa3.5□□□□□ -1.85
HMG20A-204ENST00000558288 MPLKIPQ8TAP9 179 aa3.5□□□□□ -1.85
HMG20A-204ENST00000558288 TRRAPQ9Y4A5 3859 aa3.5□□□□□ -1.85
HMG20A-204ENST00000558288 IGLV10-54A0A075B6I4 117 aa3.5□□□□□ -1.85
HMG20A-204ENST00000558288 DEFB130BP0DP73 79 aa3.5□□□□□ -1.85
HMG20A-204ENST00000558288 DEFB130AP0DP74 79 aa3.5□□□□□ -1.85
HMG20A-204ENST00000558288 Q8N3U1 123 aa3.5□□□□□ -1.85
HMG20A-204ENST00000558288 LINC00167Q96N53 147 aa3.5□□□□□ -1.85
HMG20A-204ENST00000558288 TRBV7-6A0A0J9YX20 115 aa3.5□□□□□ -1.85
HMG20A-204ENST00000558288 ZNF561-AS1K7EIQ3 104 aa3.5□□□□□ -1.85
HMG20A-204ENST00000558288 Q6YL49 198 aa3.5□□□□□ -1.85
HMG20A-204ENST00000558288 IL17DQ8TAD2 202 aa3.5□□□□□ -1.85
HMG20A-204ENST00000558288 C16orf74Q96GX8 76 aa3.5□□□□□ -1.85
HMG20A-204ENST00000558288 KLKP1Q107X0 134 aa3.49□□□□□ -1.85
HMG20A-204ENST00000558288 FP248Q71RG6 208 aaPredicted RBP3.49□□□□□ -1.85
HMG20A-204ENST00000558288 Q8IZM0 81 aa3.49□□□□□ -1.85
HMG20A-204ENST00000558288 LINC00269Q8N2A0 174 aa3.49□□□□□ -1.85
HMG20A-204ENST00000558288 LINC00482Q8N8I6 264 aa3.49□□□□□ -1.85
HMG20A-204ENST00000558288 TM2D3Q9BRN9 247 aa3.49□□□□□ -1.85
HMG20A-204ENST00000558288 WFDC10AQ9H1F0 79 aa3.49□□□□□ -1.85
HMG20A-204ENST00000558288 LINC00575Q6W349 94 aa3.49□□□□□ -1.85
HMG20A-204ENST00000558288 Q6ZQY7 126 aa3.49□□□□□ -1.85
HMG20A-204ENST00000558288 C4orf3Q8WVX3 66 aa3.49□□□□□ -1.85
HMG20A-204ENST00000558288 MIFP14174 115 aa3.48□□□□□ -1.85
HMG20A-204ENST00000558288 GYPEP15421 78 aa3.48□□□□□ -1.85
HMG20A-204ENST00000558288 BCE1O60756 84 aa3.47□□□□□ -1.85
HMG20A-204ENST00000558288 NREPQ16612 68 aa3.47□□□□□ -1.85
HMG20A-204ENST00000558288 LOC110117498A0A087WWA1 95 aa3.47□□□□□ -1.85
HMG20A-204ENST00000558288 NDUFC1O43677 76 aa3.47□□□□□ -1.85
HMG20A-204ENST00000558288 EPM2AB3EWF7 344 aa3.47□□□□□ -1.85
HMG20A-204ENST00000558288 ANGP03950 147 aaKnown RBP3.47□□□□□ -1.85
HMG20A-204ENST00000558288 DAD1P61803 113 aa3.47□□□□□ -1.85
HMG20A-204ENST00000558288 CXCL6P80162 114 aa3.47□□□□□ -1.85
HMG20A-204ENST00000558288 C6orf223Q8N319 242 aa3.47□□□□□ -1.85
HMG20A-204ENST00000558288 C16orf95Q9H693 158 aa3.47□□□□□ -1.85
HMG20A-204ENST00000558288 TENM3Q9P273 2699 aa3.46□□□□□ -1.85
HMG20A-204ENST00000558288 PLAC8L1A1L4L8 177 aa3.46□□□□□ -1.86
HMG20A-204ENST00000558288 BPY2O14599 106 aa3.46□□□□□ -1.86
HMG20A-204ENST00000558288 C1orf195Q5TG92 126 aa3.46□□□□□ -1.86
HMG20A-204ENST00000558288 Q8N9L7 120 aa3.46□□□□□ -1.86
HMG20A-204ENST00000558288 MUC7Q8TAX7 377 aa3.46□□□□□ -1.86
HMG20A-204ENST00000558288 TMEM254Q8TBM7 123 aa3.46□□□□□ -1.86
HMG20A-204ENST00000558288 PDE6GP18545 87 aa3.46□□□□□ -1.86
HMG20A-204ENST00000558288 KRTAP10-3P60369 221 aa3.46□□□□□ -1.86
HMG20A-204ENST00000558288 COX17Q14061 63 aa3.46□□□□□ -1.86
HMG20A-204ENST00000558288 Q8NDZ9 215 aa3.46□□□□□ -1.86
HMG20A-204ENST00000558288 CHCHD10Q8WYQ3 142 aaPredicted RBP3.46□□□□□ -1.86
HMG20A-204ENST00000558288 ATP5EP56381 51 aaPredicted RBP3.46□□□□□ -1.86
HMG20A-204ENST00000558288 CCL24O00175 119 aa3.45□□□□□ -1.86
HMG20A-204ENST00000558288 FSHBP01225 129 aa3.45□□□□□ -1.86
HMG20A-204ENST00000558288 CD164L2Q6UWJ8 174 aa3.45□□□□□ -1.86
HMG20A-204ENST00000558288 UNQ6190/PRO20217Q6UXQ8 127 aa3.45□□□□□ -1.86
HMG20A-204ENST00000558288 V9GYY9 64 aa3.45□□□□□ -1.86
HMG20A-204ENST00000558288 STAB2Q8WWQ8 2551 aa3.45□□□□□ -1.86
HMG20A-204ENST00000558288 TRBV7-4A0A0J9YYF1 115 aa3.45□□□□□ -1.86
HMG20A-204ENST00000558288 GIG44P09565 113 aaPredicted RBP3.45□□□□□ -1.86
HMG20A-204ENST00000558288 FUSP35637 526 aaKnown RBP eCLIP3.45□□□□□ -1.86
HMG20A-204ENST00000558288 FAM229BQ4G0N7 80 aa3.45□□□□□ -1.86
HMG20A-204ENST00000558288 DIRC1Q969H9 104 aa3.45□□□□□ -1.86
HMG20A-204ENST00000558288 REG3AQ06141 175 aa3.44□□□□□ -1.86
HMG20A-204ENST00000558288 SPAG11BQ08648 103 aa3.44□□□□□ -1.86
HMG20A-204ENST00000558288 KIAA0087Q14695 138 aa3.44□□□□□ -1.86
HMG20A-204ENST00000558288 C10orf25Q5T742 122 aa3.44□□□□□ -1.86
HMG20A-204ENST00000558288 XAGE1AQ9HD64 81 aa3.44□□□□□ -1.86
HMG20A-204ENST00000558288 A0A1B0GUV1 79 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms