RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 HMCN2Q8NDA2 5059 aa6.11□□□□□ -1.43
USP3-207ENST00000558218 IGLV5-37A0A075B6J1 123 aa6.1□□□□□ -1.43
USP3-207ENST00000558218 SPINK8P0C7L1 97 aa6.1□□□□□ -1.43
USP3-207ENST00000558218 RPL13AP40429 203 aaKnown RBP6.1□□□□□ -1.43
USP3-207ENST00000558218 NDUFA6P56556 154 aa6.1□□□□□ -1.43
USP3-207ENST00000558218 COX17Q14061 63 aa6.1□□□□□ -1.43
USP3-207ENST00000558218 BAGE3Q86Y29 109 aa6.09□□□□□ -1.43
USP3-207ENST00000558218 CHCHD1Q96BP2 118 aaKnown RBP6.09□□□□□ -1.43
USP3-207ENST00000558218 TNXBP22105 4242 aa6.08□□□□□ -1.44
USP3-207ENST00000558218 KRTAP1-4P0C5Y4 121 aa6.08□□□□□ -1.44
USP3-207ENST00000558218 ZNF22P17026 224 aaPredicted RBP6.08□□□□□ -1.44
USP3-207ENST00000558218 RPL28P46779 137 aaKnown RBP6.08□□□□□ -1.44
USP3-207ENST00000558218 PRR26Q8N8Z3 221 aa6.08□□□□□ -1.44
USP3-207ENST00000558218 LINC00167Q96N53 147 aa6.08□□□□□ -1.44
USP3-207ENST00000558218 YPEL4Q96NS1 127 aa6.08□□□□□ -1.44
USP3-207ENST00000558218 BCE1O60756 84 aa6.07□□□□□ -1.44
USP3-207ENST00000558218 TRAV12-1A0A0B4J245 112 aa6.06□□□□□ -1.44
USP3-207ENST00000558218 RPL24P83731 157 aaKnown RBP6.06□□□□□ -1.44
USP3-207ENST00000558218 NKAPP1Q8N9T2 125 aa6.06□□□□□ -1.44
USP3-207ENST00000558218 ERG28Q9UKR5 140 aa6.06□□□□□ -1.44
USP3-207ENST00000558218 C11orf86A6NJI1 115 aa6.05□□□□□ -1.44
USP3-207ENST00000558218 PMCHL1Q16048 86 aa6.05□□□□□ -1.44
USP3-207ENST00000558218 TMEM170BQ5T4T1 132 aa6.05□□□□□ -1.44
USP3-207ENST00000558218 CHTOPQ9Y3Y2 248 aaKnown RBP6.05□□□□□ -1.44
USP3-207ENST00000558218 PFN2P35080 140 aa6.04□□□□□ -1.44
USP3-207ENST00000558218 IFI27L1Q96BM0 104 aa6.04□□□□□ -1.44
USP3-207ENST00000558218 SND1-IT1Q9HBX3 110 aa6.04□□□□□ -1.44
USP3-207ENST00000558218 RPL37AP8A6NKH3 93 aa6.03□□□□□ -1.44
USP3-207ENST00000558218 ZNF625Q96I27 306 aaPredicted RBP6.03□□□□□ -1.44
USP3-207ENST00000558218 TMA7Q9Y2S6 64 aaKnown RBP6.03□□□□□ -1.44
USP3-207ENST00000558218 TMEM223A0PJW6 202 aa6.02□□□□□ -1.45
USP3-207ENST00000558218 LINC00587B1AMM8 73 aa6.02□□□□□ -1.45
USP3-207ENST00000558218 HSBP1O75506 76 aa6.02□□□□□ -1.45
USP3-207ENST00000558218 VPREB1P12018 145 aa6.02□□□□□ -1.45
USP3-207ENST00000558218 GAGE10A6NGK3 116 aa6.01□□□□□ -1.45
USP3-207ENST00000558218 CRYGAP11844 174 aa6.01□□□□□ -1.45
USP3-207ENST00000558218 KRTAP13-1Q8IUC0 172 aa6.01□□□□□ -1.45
USP3-207ENST00000558218 UBE2AP49459 152 aa6□□□□□ -1.45
USP3-207ENST00000558218 HERV-K104P63124 156 aa6□□□□□ -1.45
USP3-207ENST00000558218 TRGC2P03986 189 aa5.99□□□□□ -1.45
USP3-207ENST00000558218 LINC00158P58513 81 aa5.99□□□□□ -1.45
USP3-207ENST00000558218 CTAG1AP78358 180 aa5.99□□□□□ -1.45
USP3-207ENST00000558218 FAM229BQ4G0N7 80 aa5.99□□□□□ -1.45
USP3-207ENST00000558218 IGKV2-28A0A075B6P5 120 aa5.98□□□□□ -1.45
USP3-207ENST00000558218 ATP6V1G1O75348 118 aa5.98□□□□□ -1.45
USP3-207ENST00000558218 IGKV2D-28P01615 120 aa5.98□□□□□ -1.45
USP3-207ENST00000558218 KRTAP15-1Q3LI76 137 aa5.98□□□□□ -1.45
USP3-207ENST00000558218 CBLN2Q8IUK8 224 aa5.98□□□□□ -1.45
USP3-207ENST00000558218 TMEM126AQ9H061 195 aa5.98□□□□□ -1.45
USP3-207ENST00000558218 M0R378 163 aa5.97□□□□□ -1.45
USP3-207ENST00000558218 LEPROTL1O95214 131 aa5.97□□□□□ -1.45
USP3-207ENST00000558218 FAM19A2Q8N3H0 131 aa5.97□□□□□ -1.45
USP3-207ENST00000558218 TYMSOSQ8TAI1 123 aa5.97□□□□□ -1.45
USP3-207ENST00000558218 MAP1LC3CQ9BXW4 147 aa5.97□□□□□ -1.45
USP3-207ENST00000558218 HSPB8Q9UJY1 196 aa5.97□□□□□ -1.45
USP3-207ENST00000558218 A0A087X002 238 aa5.96□□□□□ -1.46
USP3-207ENST00000558218 IGKV2D-26A0A0A0MRZ7 120 aa5.96□□□□□ -1.46
USP3-207ENST00000558218 MYMXA0A1B0GTQ4 84 aa5.96□□□□□ -1.46
USP3-207ENST00000558218 PLNP26678 52 aa5.96□□□□□ -1.46
USP3-207ENST00000558218 B5MCH6 92 aa5.95□□□□□ -1.46
USP3-207ENST00000558218 SCO1O75880 301 aa5.95□□□□□ -1.46
USP3-207ENST00000558218 SERF1AO75920 110 aa5.95□□□□□ -1.46
USP3-207ENST00000558218 FAM19A1Q7Z5A9 133 aa5.95□□□□□ -1.46
USP3-207ENST00000558218 NDUFA12Q9UI09 145 aa5.95□□□□□ -1.46
USP3-207ENST00000558218 LRP2P98164 4655 aa5.94□□□□□ -1.46
USP3-207ENST00000558218 LOC107984156A0A0G2JMH3 177 aa5.94□□□□□ -1.46
USP3-207ENST00000558218 COLCA2A8K830 154 aa5.94□□□□□ -1.46
USP3-207ENST00000558218 TMEM238C9JI98 176 aa5.94□□□□□ -1.46
USP3-207ENST00000558218 LEPROTO15243 131 aa5.94□□□□□ -1.46
USP3-207ENST00000558218 SMIM13P0DJ93 91 aa5.94□□□□□ -1.46
USP3-207ENST00000558218 MEIG1Q5JSS6 88 aa5.94□□□□□ -1.46
USP3-207ENST00000558218 ARL17AQ8IVW1 177 aa5.94□□□□□ -1.46
USP3-207ENST00000558218 Q8NDZ9 215 aa5.94□□□□□ -1.46
USP3-207ENST00000558218 PLEKHB2Q96CS7 222 aa5.94□□□□□ -1.46
USP3-207ENST00000558218 NMUP48645 174 aa5.93□□□□□ -1.46
USP3-207ENST00000558218 HERVK_113P61574 105 aa5.93□□□□□ -1.46
USP3-207ENST00000558218 S100A12P80511 92 aa5.93□□□□□ -1.46
USP3-207ENST00000558218 PRLHP81277 87 aa5.93□□□□□ -1.46
USP3-207ENST00000558218 BOD1L2Q8IYS8 172 aa5.93□□□□□ -1.46
USP3-207ENST00000558218 SLC7A5P1Q8MH63 180 aa5.93□□□□□ -1.46
USP3-207ENST00000558218 MIR7-3HGQ8N6C7 128 aa5.93□□□□□ -1.46
USP3-207ENST00000558218 KCNQ1DNQ9H478 68 aa5.93□□□□□ -1.46
USP3-207ENST00000558218 A0A0U1RRA0 63 aa5.92□□□□□ -1.46
USP3-207ENST00000558218 PRYO14603 147 aa5.92□□□□□ -1.46
USP3-207ENST00000558218 DPM2O94777 84 aa5.92□□□□□ -1.46
USP3-207ENST00000558218 SPRR1AP35321 89 aa5.92□□□□□ -1.46
USP3-207ENST00000558218 PRR4Q16378 134 aa5.92□□□□□ -1.46
USP3-207ENST00000558218 LINC00337Q8N6G1 96 aa5.92□□□□□ -1.46
USP3-207ENST00000558218 H0Y8G0 127 aa5.91□□□□□ -1.46
USP3-207ENST00000558218 J3QQQ9 107 aa5.91□□□□□ -1.46
USP3-207ENST00000558218 IGKCP01834 107 aa5.91□□□□□ -1.46
USP3-207ENST00000558218 KRTAP13-2Q52LG2 175 aa5.91□□□□□ -1.46
USP3-207ENST00000558218 ANAPC11Q9NYG5 84 aa5.91□□□□□ -1.46
USP3-207ENST00000558218 ZNF706Q9Y5V0 76 aaPredicted RBP5.91□□□□□ -1.46
USP3-207ENST00000558218 TRBV10-2A0A0K0K1G8 114 aa5.9□□□□□ -1.46
USP3-207ENST00000558218 TSPAN13O95857 204 aa5.9□□□□□ -1.46
USP3-207ENST00000558218 FABP4P15090 132 aa5.9□□□□□ -1.46
USP3-207ENST00000558218 SPAG11AQ6PDA7 123 aa5.9□□□□□ -1.46
USP3-207ENST00000558218 LINC00304Q8N9R0 145 aa5.9□□□□□ -1.46
USP3-207ENST00000558218 RNF213Q63HN8 5207 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 339.5 ms