RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 LINC00322Q6ZN03 302 aaPredicted RBP1.39□□□□□ -2.19
TRAV28-201ENST00000557548 V9GYV3 84 aa1.39□□□□□ -2.19
TRAV28-201ENST00000557548 EP300Q09472 2414 aaPredicted RBP1.39□□□□□ -2.19
TRAV28-201ENST00000557548 CACNA1EQ15878 2313 aa1.39□□□□□ -2.19
TRAV28-201ENST00000557548 F5P12259 2224 aa1.39□□□□□ -2.19
TRAV28-201ENST00000557548 EPG5Q9HCE0 2579 aa1.39□□□□□ -2.19
TRAV28-201ENST00000557548 PTPRZ1P23471 2315 aaPredicted RBP1.38□□□□□ -2.19
TRAV28-201ENST00000557548 IGKV2-40A0A087WW87 121 aaPredicted RBP1.38□□□□□ -2.19
TRAV28-201ENST00000557548 IGKV3D-7A0A0C4DH55 119 aa1.38□□□□□ -2.19
TRAV28-201ENST00000557548 IGKV3OR2-268A0A0C4DH90 116 aa1.38□□□□□ -2.19
TRAV28-201ENST00000557548 F8VRH5 84 aa1.38□□□□□ -2.19
TRAV28-201ENST00000557548 IGKV2D-40P01614 121 aaPredicted RBP1.38□□□□□ -2.19
TRAV28-201ENST00000557548 ARMS2P0C7Q2 107 aa1.38□□□□□ -2.19
TRAV28-201ENST00000557548 CCL18P55774 89 aa1.38□□□□□ -2.19
TRAV28-201ENST00000557548 KRTAP13-4Q3LI77 160 aa1.38□□□□□ -2.19
TRAV28-201ENST00000557548 Q6JHZ5 121 aa1.38□□□□□ -2.19
TRAV28-201ENST00000557548 PRR15LQ9BU68 103 aa1.38□□□□□ -2.19
TRAV28-201ENST00000557548 PSENENQ9NZ42 101 aa1.38□□□□□ -2.19
TRAV28-201ENST00000557548 ARFGEF3Q5TH69 2177 aa1.38□□□□□ -2.19
TRAV28-201ENST00000557548 MDC1Q14676 2089 aaKnown RBP1.38□□□□□ -2.19
TRAV28-201ENST00000557548 GOLGA4Q13439 2230 aaKnown RBP1.38□□□□□ -2.19
TRAV28-201ENST00000557548 ASXL3Q9C0F0 2248 aa1.38□□□□□ -2.19
TRAV28-201ENST00000557548 TPRP12270 2363 aaKnown RBP1.37□□□□□ -2.19
TRAV28-201ENST00000557548 NCOR2Q9Y618 2525 aa1.37□□□□□ -2.19
TRAV28-201ENST00000557548 CELSR3Q9NYQ7 3312 aa1.37□□□□□ -2.19
TRAV28-201ENST00000557548 KNL1Q8NG31 2342 aa1.37□□□□□ -2.19
TRAV28-201ENST00000557548 A0A0D9SFI3 127 aa1.37□□□□□ -2.19
TRAV28-201ENST00000557548 TRBV6-5A0A0K0K1A5 114 aa1.37□□□□□ -2.19
TRAV28-201ENST00000557548 IGKV2-29A2NJV5 120 aaPredicted RBP1.37□□□□□ -2.19
TRAV28-201ENST00000557548 D6R8Y8 96 aa1.37□□□□□ -2.19
TRAV28-201ENST00000557548 FXYD1O00168 92 aa1.37□□□□□ -2.19
TRAV28-201ENST00000557548 UQCR11O14957 56 aa1.37□□□□□ -2.19
TRAV28-201ENST00000557548 INE1O15225 51 aa1.37□□□□□ -2.19
TRAV28-201ENST00000557548 COX8AP10176 69 aa1.37□□□□□ -2.19
TRAV28-201ENST00000557548 GCHFRP30047 84 aa1.37□□□□□ -2.19
TRAV28-201ENST00000557548 SPINT3P49223 89 aa1.37□□□□□ -2.19
TRAV28-201ENST00000557548 KRTAP12-1P59990 96 aa1.37□□□□□ -2.19
TRAV28-201ENST00000557548 FXYD3Q14802 87 aa1.37□□□□□ -2.19
TRAV28-201ENST00000557548 BAGE2Q86Y30 109 aa1.37□□□□□ -2.19
TRAV28-201ENST00000557548 MUSTN1Q8IVN3 82 aa1.37□□□□□ -2.19
TRAV28-201ENST00000557548 ZNF563Q8TA94 476 aa1.37□□□□□ -2.19
TRAV28-201ENST00000557548 ZNF625Q96I27 306 aaPredicted RBP1.37□□□□□ -2.19
TRAV28-201ENST00000557548 NBEAQ8NFP9 2946 aa1.37□□□□□ -2.19
TRAV28-201ENST00000557548 LOC400499M0QZD8 3231 aa1.37□□□□□ -2.19
TRAV28-201ENST00000557548 CHD8Q9HCK8 2581 aa1.37□□□□□ -2.19
TRAV28-201ENST00000557548 DOCK10Q96BY6 2186 aa1.37□□□□□ -2.19
TRAV28-201ENST00000557548 CHD6Q8TD26 2715 aa1.36□□□□□ -2.19
TRAV28-201ENST00000557548 LOC110117498A0A087WWA1 95 aa1.36□□□□□ -2.19
TRAV28-201ENST00000557548 NBDYA0A0U1RRE5 68 aa1.36□□□□□ -2.19
TRAV28-201ENST00000557548 CTXND1A0A1B0GTU2 59 aa1.36□□□□□ -2.19
TRAV28-201ENST00000557548 LOC730098B7Z3J9 87 aa1.36□□□□□ -2.19
TRAV28-201ENST00000557548 M0R2N4 97 aa1.36□□□□□ -2.19
TRAV28-201ENST00000557548 MGPP08493 103 aa1.36□□□□□ -2.19
TRAV28-201ENST00000557548 IFI27P40305 119 aaPredicted RBP1.36□□□□□ -2.19
TRAV28-201ENST00000557548 PCOTHQ58A44 107 aa1.36□□□□□ -2.19
TRAV28-201ENST00000557548 BAGE3Q86Y29 109 aa1.36□□□□□ -2.19
TRAV28-201ENST00000557548 SNURFQ9Y675 71 aa1.36□□□□□ -2.19
TRAV28-201ENST00000557548 LINC01558Q9Y6Z2 57 aa1.36□□□□□ -2.19
TRAV28-201ENST00000557548 ZZEF1O43149 2961 aa1.36□□□□□ -2.19
TRAV28-201ENST00000557548 ICE1Q9Y2F5 2266 aa1.36□□□□□ -2.19
TRAV28-201ENST00000557548 DOPEY2Q9Y3R5 2298 aa1.36□□□□□ -2.19
TRAV28-201ENST00000557548 MYO7BQ6PIF6 2116 aa1.36□□□□□ -2.19
TRAV28-201ENST00000557548 ACACBO00763 2458 aa1.35□□□□□ -2.19
TRAV28-201ENST00000557548 TRGV2A0A075B6R0 118 aa1.35□□□□□ -2.19
TRAV28-201ENST00000557548 C10orf142B7Z368 130 aa1.35□□□□□ -2.19
TRAV28-201ENST00000557548 M0R135 149 aa1.35□□□□□ -2.19
TRAV28-201ENST00000557548 COX17Q14061 63 aa1.35□□□□□ -2.19
TRAV28-201ENST00000557548 KRTAP13-1Q8IUC0 172 aa1.35□□□□□ -2.19
TRAV28-201ENST00000557548 C5orf56Q8N8D9 126 aa1.35□□□□□ -2.19
TRAV28-201ENST00000557548 IGF2RP11717 2491 aa1.35□□□□□ -2.19
TRAV28-201ENST00000557548 DMXL2Q8TDJ6 3036 aa1.35□□□□□ -2.19
TRAV28-201ENST00000557548 ALPK2Q86TB3 2170 aa1.35□□□□□ -2.19
TRAV28-201ENST00000557548 RTTNQ86VV8 2226 aa1.35□□□□□ -2.19
TRAV28-201ENST00000557548 FAM208BQ5VWN6 2430 aa1.35□□□□□ -2.19
TRAV28-201ENST00000557548 PKD1L2Q7Z442 2459 aa1.34□□□□□ -2.19
TRAV28-201ENST00000557548 GCN1Q92616 2671 aaKnown RBP1.34□□□□□ -2.19
TRAV28-201ENST00000557548 PTPRQQ9UMZ3 2332 aa1.34□□□□□ -2.19
TRAV28-201ENST00000557548 ITPR1Q14643 2758 aa1.34□□□□□ -2.19
TRAV28-201ENST00000557548 IGSF10Q6WRI0 2623 aa1.34□□□□□ -2.19
TRAV28-201ENST00000557548 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.34□□□□□ -2.19
TRAV28-201ENST00000557548 A0A087WTM6 91 aa1.34□□□□□ -2.19
TRAV28-201ENST00000557548 A0A087WVE0 104 aa1.34□□□□□ -2.19
TRAV28-201ENST00000557548 M0R3E3 92 aa1.34□□□□□ -2.19
TRAV28-201ENST00000557548 SMIM4Q8WVI0 70 aa1.34□□□□□ -2.19
TRAV28-201ENST00000557548 WFDC6Q9BQY6 131 aa1.34□□□□□ -2.19
TRAV28-201ENST00000557548 PROK2Q9HC23 129 aa1.34□□□□□ -2.19
TRAV28-201ENST00000557548 GNG13Q9P2W3 67 aa1.34□□□□□ -2.19
TRAV28-201ENST00000557548 UBE2D4Q9Y2X8 147 aa1.34□□□□□ -2.19
TRAV28-201ENST00000557548 Q9Y3F1 56 aa1.34□□□□□ -2.19
TRAV28-201ENST00000557548 HILPDAQ9Y5L2 63 aa1.34□□□□□ -2.19
TRAV28-201ENST00000557548 COL6A6A6NMZ7 2263 aa1.34□□□□□ -2.2
TRAV28-201ENST00000557548 ABCA4P78363 2273 aa1.34□□□□□ -2.2
TRAV28-201ENST00000557548 FASNP49327 2511 aaKnown RBP1.34□□□□□ -2.2
TRAV28-201ENST00000557548 ZFYVE26Q68DK2 2539 aa1.34□□□□□ -2.2
TRAV28-201ENST00000557548 FREM2Q5SZK8 3169 aa1.34□□□□□ -2.2
TRAV28-201ENST00000557548 TENM4Q6N022 2769 aa1.34□□□□□ -2.2
TRAV28-201ENST00000557548 CACNA1GO43497 2377 aa1.34□□□□□ -2.2
TRAV28-201ENST00000557548 LAMA5O15230 3695 aa1.34□□□□□ -2.2
TRAV28-201ENST00000557548 ACACAQ13085 2346 aa1.33□□□□□ -2.2
TRAV28-201ENST00000557548 ATMQ13315 3056 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms