RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 MIEN1Q9BRT3 115 aa1.77□□□□□ -2.13
VRK1-207ENST00000557352 C2orf88Q9BSF0 95 aa1.77□□□□□ -2.13
VRK1-207ENST00000557352 CST9LQ9H4G1 147 aa1.77□□□□□ -2.13
VRK1-207ENST00000557352 CDC42SE2Q9NRR3 84 aa1.77□□□□□ -2.13
VRK1-207ENST00000557352 MRPL35Q9NZE8 188 aaKnown RBP1.77□□□□□ -2.13
VRK1-207ENST00000557352 HIGD1BQ9P298 99 aa1.77□□□□□ -2.13
VRK1-207ENST00000557352 MRPS16Q9Y3D3 137 aaKnown RBP1.77□□□□□ -2.13
VRK1-207ENST00000557352 CHTOPQ9Y3Y2 248 aaKnown RBP1.77□□□□□ -2.13
VRK1-207ENST00000557352 ICOSQ9Y6W8 199 aa1.77□□□□□ -2.13
VRK1-207ENST00000557352 CSMD3Q7Z407 3707 aa1.77□□□□□ -2.13
VRK1-207ENST00000557352 HUWE1Q7Z6Z7 4374 aaKnown RBP1.77□□□□□ -2.13
VRK1-207ENST00000557352 MEGF8Q7Z7M0 2845 aa1.76□□□□□ -2.13
VRK1-207ENST00000557352 DNAH9Q9NYC9 4486 aa1.76□□□□□ -2.13
VRK1-207ENST00000557352 A0A096LPF7 62 aa1.76□□□□□ -2.13
VRK1-207ENST00000557352 TRAV10A0A0B4J240 114 aa1.76□□□□□ -2.13
VRK1-207ENST00000557352 F5H768 121 aa1.76□□□□□ -2.13
VRK1-207ENST00000557352 UBE2L6O14933 153 aa1.76□□□□□ -2.13
VRK1-207ENST00000557352 UBE2D1P51668 147 aa1.76□□□□□ -2.13
VRK1-207ENST00000557352 EMP1P54849 157 aa1.76□□□□□ -2.13
VRK1-207ENST00000557352 TAL2Q16559 108 aa1.76□□□□□ -2.13
VRK1-207ENST00000557352 KRTAP6-3Q3LI67 103 aa1.76□□□□□ -2.13
VRK1-207ENST00000557352 LINC01556Q5JQF7 62 aa1.76□□□□□ -2.13
VRK1-207ENST00000557352 OR5A1Q8NGJ0 315 aa1.76□□□□□ -2.13
VRK1-207ENST00000557352 PLEKHB2Q96CS7 222 aa1.76□□□□□ -2.13
VRK1-207ENST00000557352 UPK3BQ9BT76 320 aa1.76□□□□□ -2.13
VRK1-207ENST00000557352 DYNC2H1Q8NCM8 4307 aaKnown RBP1.76□□□□□ -2.13
VRK1-207ENST00000557352 FBN3Q75N90 2809 aa1.75□□□□□ -2.13
VRK1-207ENST00000557352 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.75□□□□□ -2.13
VRK1-207ENST00000557352 DEFB131BA0A096LNP1 70 aa1.75□□□□□ -2.13
VRK1-207ENST00000557352 TRAV8-4A0A0B4J246 113 aa1.75□□□□□ -2.13
VRK1-207ENST00000557352 IGHV3OR16-9A0A0B4J2B5 98 aa1.75□□□□□ -2.13
VRK1-207ENST00000557352 IGHV1-58A0A0C4DH39 117 aa1.75□□□□□ -2.13
VRK1-207ENST00000557352 IGKV2-29A2NJV5 120 aaPredicted RBP1.75□□□□□ -2.13
VRK1-207ENST00000557352 H3BRM9 83 aa1.75□□□□□ -2.13
VRK1-207ENST00000557352 M0R143 59 aa1.75□□□□□ -2.13
VRK1-207ENST00000557352 LEPROTO15243 131 aa1.75□□□□□ -2.13
VRK1-207ENST00000557352 TIMM17BO60830 172 aa1.75□□□□□ -2.13
VRK1-207ENST00000557352 ZNF22P17026 224 aaPredicted RBP1.75□□□□□ -2.13
VRK1-207ENST00000557352 AMMECR1LQ6DCA0 310 aa1.75□□□□□ -2.13
VRK1-207ENST00000557352 ZFAND6Q6FIF0 208 aa1.75□□□□□ -2.13
VRK1-207ENST00000557352 Q6ZUT4 128 aa1.75□□□□□ -2.13
VRK1-207ENST00000557352 C2orf91Q6ZV80 131 aa1.75□□□□□ -2.13
VRK1-207ENST00000557352 MUC7Q8TAX7 377 aa1.75□□□□□ -2.13
VRK1-207ENST00000557352 RETNQ9HD89 108 aa1.75□□□□□ -2.13
VRK1-207ENST00000557352 SPANXB1Q9NS25 103 aaPredicted RBP1.75□□□□□ -2.13
VRK1-207ENST00000557352 TP73-AS1Q9UF72 201 aa1.75□□□□□ -2.13
VRK1-207ENST00000557352 DNAH6Q9C0G6 4158 aa1.74□□□□□ -2.13
VRK1-207ENST00000557352 IGKV2D-26A0A0A0MRZ7 120 aa1.74□□□□□ -2.13
VRK1-207ENST00000557352 TRAV8-6A0A0B4J262 113 aa1.74□□□□□ -2.13
VRK1-207ENST00000557352 A0A0J9YXV3 536 aa1.74□□□□□ -2.13
VRK1-207ENST00000557352 MYMXA0A1B0GTQ4 84 aa1.74□□□□□ -2.13
VRK1-207ENST00000557352 LINC00959A0A1B0GUT2 108 aa1.74□□□□□ -2.13
VRK1-207ENST00000557352 A6NDN8 102 aa1.74□□□□□ -2.13
VRK1-207ENST00000557352 NUPR2A6NF83 97 aa1.74□□□□□ -2.13
VRK1-207ENST00000557352 LINC00587B1AMM8 73 aa1.74□□□□□ -2.13
VRK1-207ENST00000557352 J3QQQ9 107 aa1.74□□□□□ -2.13
VRK1-207ENST00000557352 NDUFA1O15239 70 aa1.74□□□□□ -2.13
VRK1-207ENST00000557352 DEFB4AO15263 64 aa1.74□□□□□ -2.13
VRK1-207ENST00000557352 IGHV3-30-3P0DP02 117 aa1.74□□□□□ -2.13
VRK1-207ENST00000557352 RBX1P62877 108 aa1.74□□□□□ -2.13
VRK1-207ENST00000557352 DEFA6Q01524 100 aa1.74□□□□□ -2.13
VRK1-207ENST00000557352 HSD52Q0P140 79 aa1.74□□□□□ -2.13
VRK1-207ENST00000557352 MIAQ16674 131 aa1.74□□□□□ -2.13
VRK1-207ENST00000557352 LYPD5Q6UWN5 251 aa1.74□□□□□ -2.13
VRK1-207ENST00000557352 ATOH7Q8N100 152 aa1.74□□□□□ -2.13
VRK1-207ENST00000557352 C10orf126Q8N4M7 172 aa1.74□□□□□ -2.13
VRK1-207ENST00000557352 COPS9Q8WXC6 57 aa1.74□□□□□ -2.13
VRK1-207ENST00000557352 C14orf144Q96I85 54 aa1.74□□□□□ -2.13
VRK1-207ENST00000557352 GEMIN7Q9H840 131 aaKnown RBP1.74□□□□□ -2.13
VRK1-207ENST00000557352 LOC107984156A0A0G2JMH3 177 aa1.73□□□□□ -2.13
VRK1-207ENST00000557352 A0A0J9YY99 117 aa1.73□□□□□ -2.13
VRK1-207ENST00000557352 ZNF815PA8K554 130 aa1.73□□□□□ -2.13
VRK1-207ENST00000557352 TMEM238C9JI98 176 aa1.73□□□□□ -2.13
VRK1-207ENST00000557352 NDUFC2-KCTD14E9PQ53 114 aa1.73□□□□□ -2.13
VRK1-207ENST00000557352 IFITM1P13164 125 aa1.73□□□□□ -2.13
VRK1-207ENST00000557352 LGALS3P17931 250 aaKnown RBP1.73□□□□□ -2.13
VRK1-207ENST00000557352 CCL18P55774 89 aa1.73□□□□□ -2.13
VRK1-207ENST00000557352 PRR3P79522 188 aaKnown RBP1.73□□□□□ -2.13
VRK1-207ENST00000557352 COX17Q14061 63 aa1.73□□□□□ -2.13
VRK1-207ENST00000557352 SS18Q15532 418 aa1.73□□□□□ -2.13
VRK1-207ENST00000557352 ESRGQ1W209 222 aa1.73□□□□□ -2.13
VRK1-207ENST00000557352 DEFB121Q5J5C9 76 aa1.73□□□□□ -2.13
VRK1-207ENST00000557352 TMEM170BQ5T4T1 132 aa1.73□□□□□ -2.13
VRK1-207ENST00000557352 ARL17AQ8IVW1 177 aa1.73□□□□□ -2.13
VRK1-207ENST00000557352 Q8IZM0 81 aa1.73□□□□□ -2.13
VRK1-207ENST00000557352 LINC00469Q8N7U9 141 aa1.73□□□□□ -2.13
VRK1-207ENST00000557352 CIRBP-AS1Q8TBR5 109 aa1.73□□□□□ -2.13
VRK1-207ENST00000557352 ZNF625Q96I27 306 aaPredicted RBP1.73□□□□□ -2.13
VRK1-207ENST00000557352 SPANXDQ9BXN6 97 aa1.73□□□□□ -2.13
VRK1-207ENST00000557352 PRO1933Q9H354 126 aa1.73□□□□□ -2.13
VRK1-207ENST00000557352 SPANXCQ9NY87 97 aa1.73□□□□□ -2.13
VRK1-207ENST00000557352 CDKN2A-AS1Q9UH64 79 aa1.73□□□□□ -2.13
VRK1-207ENST00000557352 KLK5Q9Y337 293 aaPredicted RBP1.73□□□□□ -2.13
VRK1-207ENST00000557352 CBY1Q9Y3M2 126 aa1.73□□□□□ -2.13
VRK1-207ENST00000557352 FCGBPQ9Y6R7 5405 aaPredicted RBP1.72□□□□□ -2.13
VRK1-207ENST00000557352 IGHV3-64A0A075B6Q5 118 aa1.72□□□□□ -2.13
VRK1-207ENST00000557352 GVQW2A0A096LPI5 108 aaPredicted RBP1.72□□□□□ -2.13
VRK1-207ENST00000557352 TRAV8-3A0A0A6YYJ7 113 aa1.72□□□□□ -2.13
VRK1-207ENST00000557352 TRAV13-1A0A0B4J241 112 aa1.72□□□□□ -2.13
VRK1-207ENST00000557352 IBA57-AS1B1ANH7 110 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms