RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 A0A0J9YWU9 116 aa15.24■□□□□ 0.03
RCCD1-208ENST00000557266 RETNQ9HD89 108 aa15.22■□□□□ 0.03
RCCD1-208ENST00000557266 STAB1Q9NY15 2570 aa15.22■□□□□ 0.03
RCCD1-208ENST00000557266 FAM236AA0A1B0GUQ0 79 aa15.21■□□□□ 0.03
RCCD1-208ENST00000557266 FAM236BA0A1B0GV22 79 aa15.21■□□□□ 0.03
RCCD1-208ENST00000557266 OXLD1Q5BKU9 147 aa15.21■□□□□ 0.03
RCCD1-208ENST00000557266 MUC7Q8TAX7 377 aa15.21■□□□□ 0.03
RCCD1-208ENST00000557266 C6orf99Q4VX62 202 aa15.2■□□□□ 0.02
RCCD1-208ENST00000557266 B5MCH6 92 aa15.2■□□□□ 0.02
RCCD1-208ENST00000557266 KRTAP10-11P60412 298 aa15.19■□□□□ 0.02
RCCD1-208ENST00000557266 S100A7L2Q5SY68 101 aa15.19■□□□□ 0.02
RCCD1-208ENST00000557266 GVQW2A0A096LPI5 108 aaPredicted RBP15.17■□□□□ 0.02
RCCD1-208ENST00000557266 LINC00846Q9NV44 126 aa15.17■□□□□ 0.02
RCCD1-208ENST00000557266 WFDC10BQ8IUB3 73 aa15.17■□□□□ 0.02
RCCD1-208ENST00000557266 COL6A5A8TX70 2615 aa15.16■□□□□ 0.02
RCCD1-208ENST00000557266 KPRPQ5T749 579 aaPredicted RBP15.16■□□□□ 0.02
RCCD1-208ENST00000557266 ANK2Q01484 3957 aa15.16■□□□□ 0.02
RCCD1-208ENST00000557266 C6orf48Q9UBA6 75 aa15.16■□□□□ 0.02
RCCD1-208ENST00000557266 H3BNG1 76 aa15.14■□□□□ 0.01
RCCD1-208ENST00000557266 TMEM256-PLSCR3K7ERE1 68 aa15.14■□□□□ 0.01
RCCD1-208ENST00000557266 IGLV6-57P01721 117 aa15.14■□□□□ 0.01
RCCD1-208ENST00000557266 Q6ZTC4 211 aa15.14■□□□□ 0.01
RCCD1-208ENST00000557266 RPL18AQ02543 176 aaKnown RBP15.13■□□□□ 0.01
RCCD1-208ENST00000557266 LINC00575Q6W349 94 aa15.13■□□□□ 0.01
RCCD1-208ENST00000557266 CCKP06307 115 aa15.11■□□□□ 0.01
RCCD1-208ENST00000557266 JMJD7-PLA2G4BH0Y9G9 81 aa15.11■□□□□ 0.01
RCCD1-208ENST00000557266 KRTAP26-1Q6PEX3 210 aa15.1■□□□□ 0.01
RCCD1-208ENST00000557266 SS18L2Q9UHA2 77 aa15.1■□□□□ 0.01
RCCD1-208ENST00000557266 XAGE1AQ9HD64 81 aa15.09■□□□□ 0.01
RCCD1-208ENST00000557266 CMYA5Q8N3K9 4069 aa15.09■□□□□ 0.01
RCCD1-208ENST00000557266 HIGD2BQ4VC39 106 aa15.08■□□□□ 0
RCCD1-208ENST00000557266 Q6JHZ5 121 aa15.08■□□□□ 0
RCCD1-208ENST00000557266 IGKV3D-7A0A0C4DH55 119 aa15.06■□□□□ 0
RCCD1-208ENST00000557266 hADV29S1A0JD25 119 aa15.06■□□□□ 0
RCCD1-208ENST00000557266 EGFEM1PQ0D2K5 195 aa15.06■□□□□ 0
RCCD1-208ENST00000557266 PKD1L1Q8TDX9 2849 aa15.06■□□□□ 0
RCCD1-208ENST00000557266 TRBV10-3A0A0K0K1G6 114 aa15.05■□□□□ 0
RCCD1-208ENST00000557266 ESRGQ1W209 222 aa15.05■□□□□ -0
RCCD1-208ENST00000557266 TENM3Q9P273 2699 aa15.04■□□□□ -0
RCCD1-208ENST00000557266 ZNF561-AS1K7EIQ3 104 aa15.04■□□□□ -0
RCCD1-208ENST00000557266 CAMK2N2Q96S95 79 aa15.04■□□□□ -0
RCCD1-208ENST00000557266 HIST1H4AP62805 103 aaKnown RBP15.03■□□□□ -0
RCCD1-208ENST00000557266 C15orf56Q8N910 161 aa15.02■□□□□ -0
RCCD1-208ENST00000557266 TRAV23DV6A0A075B6W5 121 aa15.02□□□□□ -0.01
RCCD1-208ENST00000557266 Q6ZRU5 148 aa15□□□□□ -0.01
RCCD1-208ENST00000557266 DNAH3Q8TD57 4116 aa14.99□□□□□ -0.01
RCCD1-208ENST00000557266 DIRC1Q969H9 104 aa14.98□□□□□ -0.01
RCCD1-208ENST00000557266 VPREB1P12018 145 aa14.98□□□□□ -0.01
RCCD1-208ENST00000557266 Q6ZQY7 126 aa14.98□□□□□ -0.01
RCCD1-208ENST00000557266 DEFB131BA0A096LNP1 70 aa14.96□□□□□ -0.01
RCCD1-208ENST00000557266 ZNF73O43830 326 aaPredicted RBP14.96□□□□□ -0.01
RCCD1-208ENST00000557266 A0A087WVE0 104 aa14.95□□□□□ -0.02
RCCD1-208ENST00000557266 LINC01556Q5JQF7 62 aa14.95□□□□□ -0.02
RCCD1-208ENST00000557266 RBM3P98179 157 aaKnown RBP14.95□□□□□ -0.02
RCCD1-208ENST00000557266 C3orf22Q8N5N4 141 aa14.95□□□□□ -0.02
RCCD1-208ENST00000557266 C2orf48Q96LS8 159 aa14.95□□□□□ -0.02
RCCD1-208ENST00000557266 MDFIQ99750 246 aa14.95□□□□□ -0.02
RCCD1-208ENST00000557266 C1orf43Q9BWL3 253 aa14.95□□□□□ -0.02
RCCD1-208ENST00000557266 Q6ZQT0 140 aa14.94□□□□□ -0.02
RCCD1-208ENST00000557266 NDUFC2-KCTD14E9PQ53 114 aa14.93□□□□□ -0.02
RCCD1-208ENST00000557266 C11orf45Q8TAV5 145 aa14.93□□□□□ -0.02
RCCD1-208ENST00000557266 LAMTOR3Q9UHA4 124 aa14.93□□□□□ -0.02
RCCD1-208ENST00000557266 LOC110117498A0A087WWA1 95 aa14.92□□□□□ -0.02
RCCD1-208ENST00000557266 ATOX1O00244 68 aa14.92□□□□□ -0.02
RCCD1-208ENST00000557266 UQCRQO14949 82 aa14.92□□□□□ -0.02
RCCD1-208ENST00000557266 COX7BP24311 80 aa14.91□□□□□ -0.02
RCCD1-208ENST00000557266 ELOF1P60002 83 aaKnown RBP14.91□□□□□ -0.02
RCCD1-208ENST00000557266 IGKV2D-24A0A075B6R9 120 aa14.9□□□□□ -0.02
RCCD1-208ENST00000557266 M0R378 163 aa14.9□□□□□ -0.02
RCCD1-208ENST00000557266 ATP5EP2Q5VTU8 51 aa14.89□□□□□ -0.03
RCCD1-208ENST00000557266 Q6ZRP5 223 aa14.89□□□□□ -0.03
RCCD1-208ENST00000557266 TRBV7-6A0A0J9YX20 115 aa14.88□□□□□ -0.03
RCCD1-208ENST00000557266 COX7CP15954 63 aa14.88□□□□□ -0.03
RCCD1-208ENST00000557266 C9orf153Q5TBE3 101 aa14.88□□□□□ -0.03
RCCD1-208ENST00000557266 H3BQ85 93 aa14.87□□□□□ -0.03
RCCD1-208ENST00000557266 M0R2N4 97 aa14.87□□□□□ -0.03
RCCD1-208ENST00000557266 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.87□□□□□ -0.03
RCCD1-208ENST00000557266 UBL5Q9BZL1 73 aa14.86□□□□□ -0.03
RCCD1-208ENST00000557266 DNAH10OSP0CZ25 163 aa14.84□□□□□ -0.03
RCCD1-208ENST00000557266 SYCNQ0VAF6 134 aa14.84□□□□□ -0.03
RCCD1-208ENST00000557266 DSCR8Q96T75 97 aa14.84□□□□□ -0.03
RCCD1-208ENST00000557266 USP17L23D6RBM5 183 aa14.83□□□□□ -0.04
RCCD1-208ENST00000557266 F8WDY8 70 aa14.83□□□□□ -0.04
RCCD1-208ENST00000557266 NOTCH1P46531 2555 aa14.82□□□□□ -0.04
RCCD1-208ENST00000557266 LINC00528Q8N1L1 170 aa14.81□□□□□ -0.04
RCCD1-208ENST00000557266 FAM19A1Q7Z5A9 133 aa14.8□□□□□ -0.04
RCCD1-208ENST00000557266 PDE6GP18545 87 aa14.79□□□□□ -0.04
RCCD1-208ENST00000557266 NBEAL1Q6ZS30 2694 aa14.78□□□□□ -0.04
RCCD1-208ENST00000557266 TRBV7-4A0A0J9YYF1 115 aa14.77□□□□□ -0.05
RCCD1-208ENST00000557266 CRYGAP11844 174 aa14.77□□□□□ -0.05
RCCD1-208ENST00000557266 SERP2Q8N6R1 65 aa14.76□□□□□ -0.05
RCCD1-208ENST00000557266 LINC00588Q9Y4M8 146 aa14.76□□□□□ -0.05
RCCD1-208ENST00000557266 GHRHP01286 108 aa14.75□□□□□ -0.05
RCCD1-208ENST00000557266 TRAV10A0A0B4J240 114 aa14.75□□□□□ -0.05
RCCD1-208ENST00000557266 PRB2P02812 416 aaPredicted RBP14.75□□□□□ -0.05
RCCD1-208ENST00000557266 SERTAD4-AS1Q5TG53 156 aa14.75□□□□□ -0.05
RCCD1-208ENST00000557266 Q6ZVQ6 151 aa14.75□□□□□ -0.05
RCCD1-208ENST00000557266 DNAH1Q9P2D7 4330 aa14.74□□□□□ -0.05
RCCD1-208ENST00000557266 MGAM2Q2M2H8 2515 aa14.74□□□□□ -0.05
RCCD1-208ENST00000557266 UPK3BQ9BT76 320 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 250.6 ms