RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 IGLV5-39A0A0G2JS06 123 aa6.88□□□□□ -1.31
SNX6-209ENST00000557265 SPINK1P00995 79 aa6.88□□□□□ -1.31
SNX6-209ENST00000557265 COX17Q14061 63 aa6.88□□□□□ -1.31
SNX6-209ENST00000557265 PMVKQ15126 192 aa6.88□□□□□ -1.31
SNX6-209ENST00000557265 ZNF625Q96I27 306 aaPredicted RBP6.88□□□□□ -1.31
SNX6-209ENST00000557265 ZNF706Q9Y5V0 76 aaPredicted RBP6.88□□□□□ -1.31
SNX6-209ENST00000557265 LINC01549A6NIU2 74 aa6.86□□□□□ -1.31
SNX6-209ENST00000557265 LCE2CQ5TA81 110 aa6.86□□□□□ -1.31
SNX6-209ENST00000557265 NDUFA12Q9UI09 145 aa6.86□□□□□ -1.31
SNX6-209ENST00000557265 LINC01546A6NGU7 62 aa6.85□□□□□ -1.31
SNX6-209ENST00000557265 IGLC3P0DOY3 106 aa6.84□□□□□ -1.31
SNX6-209ENST00000557265 SMCR5Q8TEV8 140 aa6.84□□□□□ -1.31
SNX6-209ENST00000557265 ZNF22P17026 224 aaPredicted RBP6.83□□□□□ -1.32
SNX6-209ENST00000557265 NDUFA6P56556 154 aa6.83□□□□□ -1.32
SNX6-209ENST00000557265 XP32Q5T750 250 aa6.83□□□□□ -1.32
SNX6-209ENST00000557265 LINC00158P58513 81 aa6.82□□□□□ -1.32
SNX6-209ENST00000557265 Q8N377 158 aa6.82□□□□□ -1.32
SNX6-209ENST00000557265 IFITM2Q01629 132 aa6.81□□□□□ -1.32
SNX6-209ENST00000557265 LINC00483Q53H64 154 aa6.81□□□□□ -1.32
SNX6-209ENST00000557265 FAM19A2Q8N3H0 131 aa6.81□□□□□ -1.32
SNX6-209ENST00000557265 IGLV9-49A0A0B4J1Y8 123 aa6.8□□□□□ -1.32
SNX6-209ENST00000557265 A0A0U1RRA0 63 aa6.8□□□□□ -1.32
SNX6-209ENST00000557265 PRYO14603 147 aa6.8□□□□□ -1.32
SNX6-209ENST00000557265 SLC25A20O43772 301 aa6.8□□□□□ -1.32
SNX6-209ENST00000557265 MT1HP80294 61 aa6.8□□□□□ -1.32
SNX6-209ENST00000557265 MOBPQ13875 183 aa6.8□□□□□ -1.32
SNX6-209ENST00000557265 KRTAP19-2Q3LHN2 52 aa6.8□□□□□ -1.32
SNX6-209ENST00000557265 CLLU1Q5K131 121 aa6.8□□□□□ -1.32
SNX6-209ENST00000557265 GAGE2AQ6NT46 116 aa6.8□□□□□ -1.32
SNX6-209ENST00000557265 SFTA2Q6UW10 78 aa6.8□□□□□ -1.32
SNX6-209ENST00000557265 FA2HQ7L5A8 372 aa6.8□□□□□ -1.32
SNX6-209ENST00000557265 SPRR1AP35321 89 aa6.79□□□□□ -1.32
SNX6-209ENST00000557265 RPS29P62273 56 aaKnown RBP6.79□□□□□ -1.32
SNX6-209ENST00000557265 SMCO4Q9NRQ5 59 aa6.79□□□□□ -1.32
SNX6-209ENST00000557265 ETDCA0A1B0GVM5 59 aa6.78□□□□□ -1.32
SNX6-209ENST00000557265 CFC1BP0CG36 223 aa6.78□□□□□ -1.32
SNX6-209ENST00000557265 SSBP3-AS1Q7Z2R9 100 aa6.78□□□□□ -1.32
SNX6-209ENST00000557265 KCNQ1DNQ9H478 68 aa6.78□□□□□ -1.32
SNX6-209ENST00000557265 KRTAP4-16G5E9R7 235 aaPredicted RBP6.77□□□□□ -1.33
SNX6-209ENST00000557265 NCR3O14931 201 aa6.77□□□□□ -1.33
SNX6-209ENST00000557265 TMEM170BQ5T4T1 132 aa6.77□□□□□ -1.33
SNX6-209ENST00000557265 BOD1L2Q8IYS8 172 aa6.77□□□□□ -1.33
SNX6-209ENST00000557265 A0A096LNJ9 63 aa6.76□□□□□ -1.33
SNX6-209ENST00000557265 C11orf86A6NJI1 115 aa6.76□□□□□ -1.33
SNX6-209ENST00000557265 SMCPP49901 116 aaPredicted RBP6.76□□□□□ -1.33
SNX6-209ENST00000557265 TRAV9-1A0A075B6T8 112 aa6.75□□□□□ -1.33
SNX6-209ENST00000557265 ATP6V1G1O75348 118 aa6.75□□□□□ -1.33
SNX6-209ENST00000557265 ERC2-IT1O76042 136 aa6.75□□□□□ -1.33
SNX6-209ENST00000557265 TRBV10-3A0A0K0K1G6 114 aa6.74□□□□□ -1.33
SNX6-209ENST00000557265 SMIM13P0DJ93 91 aa6.74□□□□□ -1.33
SNX6-209ENST00000557265 BAGE3Q86Y29 109 aa6.74□□□□□ -1.33
SNX6-209ENST00000557265 IGLV8-61A0A075B6I0 122 aa6.73□□□□□ -1.33
SNX6-209ENST00000557265 B5MCH6 92 aa6.73□□□□□ -1.33
SNX6-209ENST00000557265 LORP23490 312 aaPredicted RBP6.73□□□□□ -1.33
SNX6-209ENST00000557265 FABP9Q0Z7S8 132 aa6.73□□□□□ -1.33
SNX6-209ENST00000557265 PCOTHQ58A44 107 aa6.73□□□□□ -1.33
SNX6-209ENST00000557265 KRTAP10-6P60371 365 aaPredicted RBP6.72□□□□□ -1.33
SNX6-209ENST00000557265 PMCHL1Q16048 86 aa6.72□□□□□ -1.33
SNX6-209ENST00000557265 COMMD7Q86VX2 200 aa6.72□□□□□ -1.33
SNX6-209ENST00000557265 MIR7-3HGQ8N6C7 128 aa6.72□□□□□ -1.33
SNX6-209ENST00000557265 TMEM218A2RU14 115 aa6.71□□□□□ -1.34
SNX6-209ENST00000557265 HBDP02042 147 aa6.71□□□□□ -1.34
SNX6-209ENST00000557265 S100PP25815 95 aa6.71□□□□□ -1.34
SNX6-209ENST00000557265 S100A12P80511 92 aa6.71□□□□□ -1.34
SNX6-209ENST00000557265 MEIG1Q5JSS6 88 aa6.71□□□□□ -1.34
SNX6-209ENST00000557265 UQCC3Q6UW78 93 aa6.71□□□□□ -1.34
SNX6-209ENST00000557265 URB1-AS1Q96HZ7 61 aa6.71□□□□□ -1.34
SNX6-209ENST00000557265 TMEM223A0PJW6 202 aa6.7□□□□□ -1.34
SNX6-209ENST00000557265 LINC00614P0C842 121 aa6.7□□□□□ -1.34
SNX6-209ENST00000557265 C9orf153Q5TBE3 101 aa6.7□□□□□ -1.34
SNX6-209ENST00000557265 Q9BRP9 147 aa6.7□□□□□ -1.34
SNX6-209ENST00000557265 CHTOPQ9Y3Y2 248 aaKnown RBP6.7□□□□□ -1.34
SNX6-209ENST00000557265 COX19Q49B96 90 aa6.69□□□□□ -1.34
SNX6-209ENST00000557265 Q6ZRX8 168 aa6.68□□□□□ -1.34
SNX6-209ENST00000557265 C9orf92A6NGG3 77 aa6.67□□□□□ -1.34
SNX6-209ENST00000557265 M0R2T5 61 aa6.67□□□□□ -1.34
SNX6-209ENST00000557265 DDTP30046 118 aa6.67□□□□□ -1.34
SNX6-209ENST00000557265 HERV-K104P63124 156 aa6.67□□□□□ -1.34
SNX6-209ENST00000557265 C18orf32Q8TCD1 76 aa6.67□□□□□ -1.34
SNX6-209ENST00000557265 SEC11CQ9BY50 192 aa6.67□□□□□ -1.34
SNX6-209ENST00000557265 LINC00587B1AMM8 73 aa6.66□□□□□ -1.34
SNX6-209ENST00000557265 MAP1LC3CQ9BXW4 147 aa6.65□□□□□ -1.34
SNX6-209ENST00000557265 TRBV10-2A0A0K0K1G8 114 aa6.64□□□□□ -1.35
SNX6-209ENST00000557265 MYMXA0A1B0GTQ4 84 aa6.63□□□□□ -1.35
SNX6-209ENST00000557265 C10orf91Q5T1B1 145 aa6.63□□□□□ -1.35
SNX6-209ENST00000557265 HRCT1Q6UXD1 115 aa6.63□□□□□ -1.35
SNX6-209ENST00000557265 ST20-AS1Q8NBB2 130 aa6.63□□□□□ -1.35
SNX6-209ENST00000557265 TRAV12-1A0A0B4J245 112 aa6.62□□□□□ -1.35
SNX6-209ENST00000557265 LOC107984156A0A0G2JMH3 177 aa6.62□□□□□ -1.35
SNX6-209ENST00000557265 JOSD1Q15040 202 aaPredicted RBP6.62□□□□□ -1.35
SNX6-209ENST00000557265 ARL17AQ8IVW1 177 aa6.62□□□□□ -1.35
SNX6-209ENST00000557265 RPS10P5Q9NQ39 176 aa6.62□□□□□ -1.35
SNX6-209ENST00000557265 TRAPPC1Q9Y5R8 145 aa6.62□□□□□ -1.35
SNX6-209ENST00000557265 S100A7L2Q5SY68 101 aa6.61□□□□□ -1.35
SNX6-209ENST00000557265 LIMD2Q9BT23 127 aa6.61□□□□□ -1.35
SNX6-209ENST00000557265 IGLV6-57P01721 117 aa6.6□□□□□ -1.35
SNX6-209ENST00000557265 RHEBQ15382 184 aa6.6□□□□□ -1.35
SNX6-209ENST00000557265 COX6B2Q6YFQ2 88 aa6.6□□□□□ -1.35
SNX6-209ENST00000557265 IFI27L1Q96BM0 104 aa6.6□□□□□ -1.35
SNX6-209ENST00000557265 SPANXB1Q9NS25 103 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms