RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 PKIGQ9Y2B9 76 aa6.66□□□□□ -1.34
HNRNPC-230ENST00000557201 AKR1D1P51857 326 aa6.65□□□□□ -1.35
HNRNPC-230ENST00000557201 SFTA2Q6UW10 78 aa6.65□□□□□ -1.35
HNRNPC-230ENST00000557201 KRTAP4-8Q9BYQ9 185 aa6.65□□□□□ -1.35
HNRNPC-230ENST00000557201 C20orf202A1L168 122 aa6.64□□□□□ -1.35
HNRNPC-230ENST00000557201 TLX1NBP0CAT3 122 aa6.64□□□□□ -1.35
HNRNPC-230ENST00000557201 SPINK6Q6UWN8 80 aa6.64□□□□□ -1.35
HNRNPC-230ENST00000557201 C6orf48Q9UBA6 75 aa6.64□□□□□ -1.35
HNRNPC-230ENST00000557201 HERVK_113P61574 105 aa6.63□□□□□ -1.35
HNRNPC-230ENST00000557201 ZNF625Q96I27 306 aaPredicted RBP6.63□□□□□ -1.35
HNRNPC-230ENST00000557201 C12orf57Q99622 126 aa6.63□□□□□ -1.35
HNRNPC-230ENST00000557201 LINC00474Q9P2X8 69 aa6.63□□□□□ -1.35
HNRNPC-230ENST00000557201 LOC107984640A0A0U1RRK4 108 aa6.62□□□□□ -1.35
HNRNPC-230ENST00000557201 E9PLD3 99 aa6.61□□□□□ -1.35
HNRNPC-230ENST00000557201 NDUFC2-KCTD14E9PQ53 114 aa6.61□□□□□ -1.35
HNRNPC-230ENST00000557201 LEPROTO15243 131 aa6.61□□□□□ -1.35
HNRNPC-230ENST00000557201 PLEKHB2Q96CS7 222 aa6.61□□□□□ -1.35
HNRNPC-230ENST00000557201 LPAP08519 4548 aa6.6□□□□□ -1.35
HNRNPC-230ENST00000557201 SMIM6P0DI80 62 aa6.6□□□□□ -1.35
HNRNPC-230ENST00000557201 PTTG1IPP53801 180 aa6.6□□□□□ -1.35
HNRNPC-230ENST00000557201 C9orf116Q5BN46 136 aaPredicted RBP6.6□□□□□ -1.35
HNRNPC-230ENST00000557201 REG3GQ6UW15 175 aa6.6□□□□□ -1.35
HNRNPC-230ENST00000557201 Q6ZRP5 223 aa6.6□□□□□ -1.35
HNRNPC-230ENST00000557201 J3QQQ9 107 aa6.59□□□□□ -1.35
HNRNPC-230ENST00000557201 COX17Q14061 63 aa6.59□□□□□ -1.35
HNRNPC-230ENST00000557201 NDUFA12Q9UI09 145 aa6.59□□□□□ -1.35
HNRNPC-230ENST00000557201 NMUP48645 174 aa6.58□□□□□ -1.36
HNRNPC-230ENST00000557201 TSPEAR-AS2P59090 65 aa6.58□□□□□ -1.36
HNRNPC-230ENST00000557201 HERV-K104P63124 156 aa6.58□□□□□ -1.36
HNRNPC-230ENST00000557201 MYMXA0A1B0GTQ4 84 aa6.57□□□□□ -1.36
HNRNPC-230ENST00000557201 A0A1W2PNN7 141 aa6.57□□□□□ -1.36
HNRNPC-230ENST00000557201 RPL18AQ02543 176 aaKnown RBP6.57□□□□□ -1.36
HNRNPC-230ENST00000557201 GAGE2BQ13066 116 aa6.57□□□□□ -1.36
HNRNPC-230ENST00000557201 LINC00587B1AMM8 73 aa6.57□□□□□ -1.36
HNRNPC-230ENST00000557201 SCGB1D1O95968 90 aa6.57□□□□□ -1.36
HNRNPC-230ENST00000557201 LGALS3P17931 250 aaKnown RBP6.57□□□□□ -1.36
HNRNPC-230ENST00000557201 ATOH7Q8N100 152 aa6.57□□□□□ -1.36
HNRNPC-230ENST00000557201 ERG28Q9UKR5 140 aa6.57□□□□□ -1.36
HNRNPC-230ENST00000557201 CBY1Q9Y3M2 126 aa6.57□□□□□ -1.36
HNRNPC-230ENST00000557201 GAGE2EQ4V326 116 aa6.56□□□□□ -1.36
HNRNPC-230ENST00000557201 GAGE2DQ9UEU5 116 aa6.56□□□□□ -1.36
HNRNPC-230ENST00000557201 IGKV2D-26A0A0A0MRZ7 120 aa6.55□□□□□ -1.36
HNRNPC-230ENST00000557201 PFN2P35080 140 aa6.55□□□□□ -1.36
HNRNPC-230ENST00000557201 JOSD1Q15040 202 aaPredicted RBP6.55□□□□□ -1.36
HNRNPC-230ENST00000557201 C9orf129Q5T035 196 aaKnown RBP6.55□□□□□ -1.36
HNRNPC-230ENST00000557201 HSBP1L1C9JCN9 74 aa6.54□□□□□ -1.36
HNRNPC-230ENST00000557201 PSORS1C2Q9UIG4 136 aa6.54□□□□□ -1.36
HNRNPC-230ENST00000557201 LINC00158P58513 81 aa6.53□□□□□ -1.36
HNRNPC-230ENST00000557201 LBHQ53QV2 105 aaPredicted RBP6.53□□□□□ -1.36
HNRNPC-230ENST00000557201 SVIPQ8NHG7 77 aa6.53□□□□□ -1.36
HNRNPC-230ENST00000557201 XAGE1AQ9HD64 81 aa6.53□□□□□ -1.36
HNRNPC-230ENST00000557201 A0A0J9YXY3 114 aa6.52□□□□□ -1.37
HNRNPC-230ENST00000557201 SMIM13P0DJ93 91 aa6.52□□□□□ -1.37
HNRNPC-230ENST00000557201 MEIG1Q5JSS6 88 aa6.52□□□□□ -1.37
HNRNPC-230ENST00000557201 KRTAP9-2Q9BYQ4 174 aa6.52□□□□□ -1.37
HNRNPC-230ENST00000557201 SND1-IT1Q9HBX3 110 aa6.52□□□□□ -1.37
HNRNPC-230ENST00000557201 FAM168BA1KXE4 195 aa6.51□□□□□ -1.37
HNRNPC-230ENST00000557201 ZNF815PA8K554 130 aa6.51□□□□□ -1.37
HNRNPC-230ENST00000557201 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.51□□□□□ -1.37
HNRNPC-230ENST00000557201 KRTAP7-1Q8IUC3 87 aa6.51□□□□□ -1.37
HNRNPC-230ENST00000557201 LOC107984156A0A0G2JMH3 177 aa6.5□□□□□ -1.37
HNRNPC-230ENST00000557201 TIMM17BO60830 172 aa6.5□□□□□ -1.37
HNRNPC-230ENST00000557201 PHF5AQ7RTV0 110 aaKnown RBP6.5□□□□□ -1.37
HNRNPC-230ENST00000557201 PCP2Q8IVA1 136 aa6.5□□□□□ -1.37
HNRNPC-230ENST00000557201 ARL17AQ8IVW1 177 aa6.5□□□□□ -1.37
HNRNPC-230ENST00000557201 TTTY13Q9BZ97 58 aa6.5□□□□□ -1.37
HNRNPC-230ENST00000557201 A0A0U1RRA0 63 aa6.49□□□□□ -1.37
HNRNPC-230ENST00000557201 PYY3Q5JQD4 70 aa6.49□□□□□ -1.37
HNRNPC-230ENST00000557201 C1orf137Q5JT78 98 aa6.49□□□□□ -1.37
HNRNPC-230ENST00000557201 KRTAP11-1Q8IUC1 163 aa6.49□□□□□ -1.37
HNRNPC-230ENST00000557201 MIR7-3HGQ8N6C7 128 aa6.49□□□□□ -1.37
HNRNPC-230ENST00000557201 TP73-AS1Q9UF72 201 aa6.49□□□□□ -1.37
HNRNPC-230ENST00000557201 IGLV7-43P04211 117 aa6.48□□□□□ -1.37
HNRNPC-230ENST00000557201 ADAMTSL4-AS1Q5T5F5 129 aa6.48□□□□□ -1.37
HNRNPC-230ENST00000557201 FAM19A5Q7Z5A7 132 aaPredicted RBP6.48□□□□□ -1.37
HNRNPC-230ENST00000557201 PRR26Q8N8Z3 221 aa6.48□□□□□ -1.37
HNRNPC-230ENST00000557201 LITAFQ99732 161 aa6.48□□□□□ -1.37
HNRNPC-230ENST00000557201 IGLV5-37A0A075B6J1 123 aa6.47□□□□□ -1.37
HNRNPC-230ENST00000557201 KRTAP9-6A0A140TA67 174 aa6.47□□□□□ -1.37
HNRNPC-230ENST00000557201 RPL24P83731 157 aaKnown RBP6.47□□□□□ -1.37
HNRNPC-230ENST00000557201 SCGB1D4Q6XE38 83 aa6.47□□□□□ -1.37
HNRNPC-230ENST00000557201 VAMP8Q9BV40 100 aa6.47□□□□□ -1.37
HNRNPC-230ENST00000557201 C22orf24Q9Y442 160 aa6.47□□□□□ -1.37
HNRNPC-230ENST00000557201 M0QXV9 152 aa6.46□□□□□ -1.37
HNRNPC-230ENST00000557201 KRTAP1-4P0C5Y4 121 aa6.46□□□□□ -1.37
HNRNPC-230ENST00000557201 VPREB1P12018 145 aa6.46□□□□□ -1.37
HNRNPC-230ENST00000557201 DAND5Q8N907 189 aa6.46□□□□□ -1.37
HNRNPC-230ENST00000557201 MUC2Q02817 5179 aa6.46□□□□□ -1.38
HNRNPC-230ENST00000557201 H0Y9J4 135 aa6.45□□□□□ -1.38
HNRNPC-230ENST00000557201 DLEU1O43261 78 aa6.45□□□□□ -1.38
HNRNPC-230ENST00000557201 COX8AP10176 69 aa6.45□□□□□ -1.38
HNRNPC-230ENST00000557201 MRPL55Q7Z7F7 128 aaKnown RBP6.45□□□□□ -1.38
HNRNPC-230ENST00000557201 BOD1L2Q8IYS8 172 aa6.45□□□□□ -1.38
HNRNPC-230ENST00000557201 DIRC1Q969H9 104 aa6.45□□□□□ -1.38
HNRNPC-230ENST00000557201 PAM16Q9Y3D7 125 aa6.45□□□□□ -1.38
HNRNPC-230ENST00000557201 TMEM238C9JI98 176 aa6.44□□□□□ -1.38
HNRNPC-230ENST00000557201 SPATA45Q537H7 98 aa6.44□□□□□ -1.38
HNRNPC-230ENST00000557201 Q6ZVH6 145 aa6.44□□□□□ -1.38
HNRNPC-230ENST00000557201 Q8NDZ9 215 aa6.44□□□□□ -1.38
HNRNPC-230ENST00000557201 MIEN1Q9BRT3 115 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms