RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 APC2O95996 2303 aa1.94□□□□□ -2.1
SLIRP-208ENST00000556956 DCHS1Q96JQ0 3298 aa1.93□□□□□ -2.1
SLIRP-208ENST00000556956 A0A0U1RQV1 116 aa1.93□□□□□ -2.1
SLIRP-208ENST00000556956 A0A1B0GW54 56 aa1.93□□□□□ -2.1
SLIRP-208ENST00000556956 PLAC8L1A1L4L8 177 aa1.93□□□□□ -2.1
SLIRP-208ENST00000556956 IGLV6-57P01721 117 aa1.93□□□□□ -2.1
SLIRP-208ENST00000556956 IGHV4-31P0DP07 118 aa1.93□□□□□ -2.1
SLIRP-208ENST00000556956 SEC61GP60059 68 aa1.93□□□□□ -2.1
SLIRP-208ENST00000556956 ESRGQ1W209 222 aa1.93□□□□□ -2.1
SLIRP-208ENST00000556956 Q6ZQY7 126 aa1.93□□□□□ -2.1
SLIRP-208ENST00000556956 CHCHD10Q8WYQ3 142 aaPredicted RBP1.93□□□□□ -2.1
SLIRP-208ENST00000556956 TM2D3Q9BRN9 247 aa1.93□□□□□ -2.1
SLIRP-208ENST00000556956 LINC00474Q9P2X8 69 aa1.93□□□□□ -2.1
SLIRP-208ENST00000556956 PRO0255Q9UI72 69 aa1.93□□□□□ -2.1
SLIRP-208ENST00000556956 LOC400499M0QZD8 3231 aa1.93□□□□□ -2.1
SLIRP-208ENST00000556956 PLCE1Q9P212 2302 aa1.92□□□□□ -2.1
SLIRP-208ENST00000556956 ZFHX2Q9C0A1 2572 aaPredicted RBP1.92□□□□□ -2.1
SLIRP-208ENST00000556956 SPTBN4Q9H254 2564 aa1.92□□□□□ -2.1
SLIRP-208ENST00000556956 GVQW2A0A096LPI5 108 aaPredicted RBP1.92□□□□□ -2.1
SLIRP-208ENST00000556956 A0A0J9YWU9 116 aa1.92□□□□□ -2.1
SLIRP-208ENST00000556956 M0R2N4 97 aa1.92□□□□□ -2.1
SLIRP-208ENST00000556956 ANGP03950 147 aaKnown RBP1.92□□□□□ -2.1
SLIRP-208ENST00000556956 GIG44P09565 113 aaPredicted RBP1.92□□□□□ -2.1
SLIRP-208ENST00000556956 REG3AQ06141 175 aa1.92□□□□□ -2.1
SLIRP-208ENST00000556956 SPAG11BQ08648 103 aa1.92□□□□□ -2.1
SLIRP-208ENST00000556956 HIGD2BQ4VC39 106 aa1.92□□□□□ -2.1
SLIRP-208ENST00000556956 SCXQ7RTU7 201 aa1.92□□□□□ -2.1
SLIRP-208ENST00000556956 LINC00269Q8N2A0 174 aa1.92□□□□□ -2.1
SLIRP-208ENST00000556956 LINC00612Q8N6U2 182 aa1.92□□□□□ -2.1
SLIRP-208ENST00000556956 CSNK1G2-AS1Q8NCQ2 148 aa1.92□□□□□ -2.1
SLIRP-208ENST00000556956 CACNA1AO00555 2505 aa1.92□□□□□ -2.1
SLIRP-208ENST00000556956 ABCA1O95477 2261 aa1.92□□□□□ -2.1
SLIRP-208ENST00000556956 POLEQ07864 2286 aa1.92□□□□□ -2.1
SLIRP-208ENST00000556956 LAMA5O15230 3695 aa1.92□□□□□ -2.1
SLIRP-208ENST00000556956 PTPRZ1P23471 2315 aaPredicted RBP1.91□□□□□ -2.1
SLIRP-208ENST00000556956 CELSR3Q9NYQ7 3312 aa1.91□□□□□ -2.1
SLIRP-208ENST00000556956 URB1O60287 2271 aaKnown RBP1.91□□□□□ -2.1
SLIRP-208ENST00000556956 LYRM9A8MSI8 78 aa1.91□□□□□ -2.1
SLIRP-208ENST00000556956 M0R378 163 aa1.91□□□□□ -2.1
SLIRP-208ENST00000556956 ZNF73O43830 326 aaPredicted RBP1.91□□□□□ -2.1
SLIRP-208ENST00000556956 IGKV4-1P06312 121 aa1.91□□□□□ -2.1
SLIRP-208ENST00000556956 DEFB130BP0DP73 79 aa1.91□□□□□ -2.1
SLIRP-208ENST00000556956 DEFB130AP0DP74 79 aa1.91□□□□□ -2.1
SLIRP-208ENST00000556956 ELOF1P60002 83 aaKnown RBP1.91□□□□□ -2.1
SLIRP-208ENST00000556956 Q1T7F1 81 aa1.91□□□□□ -2.1
SLIRP-208ENST00000556956 C9orf116Q5BN46 136 aaPredicted RBP1.91□□□□□ -2.1
SLIRP-208ENST00000556956 CLPSL2Q6UWE3 100 aa1.91□□□□□ -2.1
SLIRP-208ENST00000556956 UNQ6190/PRO20217Q6UXQ8 127 aa1.91□□□□□ -2.1
SLIRP-208ENST00000556956 PRR15Q8IV56 129 aa1.91□□□□□ -2.1
SLIRP-208ENST00000556956 LINC01006Q8NI28 216 aa1.91□□□□□ -2.1
SLIRP-208ENST00000556956 OCR1Q9BZK8 76 aa1.91□□□□□ -2.1
SLIRP-208ENST00000556956 ESM1Q9NQ30 184 aa1.91□□□□□ -2.1
SLIRP-208ENST00000556956 PCNX1Q96RV3 2341 aa1.91□□□□□ -2.1
SLIRP-208ENST00000556956 IGF2RP11717 2491 aa1.91□□□□□ -2.1
SLIRP-208ENST00000556956 CFAP47Q6ZTR5 3102 aa1.91□□□□□ -2.1
SLIRP-208ENST00000556956 PRRC2AP48634 2157 aaKnown RBP1.91□□□□□ -2.1
SLIRP-208ENST00000556956 CEP295Q9C0D2 2601 aa1.9□□□□□ -2.1
SLIRP-208ENST00000556956 HIVEP3Q5T1R4 2406 aa1.9□□□□□ -2.1
SLIRP-208ENST00000556956 ATMQ13315 3056 aa1.9□□□□□ -2.1
SLIRP-208ENST00000556956 SPTBN2O15020 2390 aa1.9□□□□□ -2.11
SLIRP-208ENST00000556956 hDV103S1A0JD37 113 aa1.9□□□□□ -2.11
SLIRP-208ENST00000556956 IGLV1-51P01701 117 aa1.9□□□□□ -2.11
SLIRP-208ENST00000556956 PMAIP1Q13794 54 aa1.9□□□□□ -2.11
SLIRP-208ENST00000556956 FAM229BQ4G0N7 80 aa1.9□□□□□ -2.11
SLIRP-208ENST00000556956 C14orf177Q52M58 125 aa1.9□□□□□ -2.11
SLIRP-208ENST00000556956 LELP1Q5T871 98 aa1.9□□□□□ -2.11
SLIRP-208ENST00000556956 HIGD2AQ9BW72 106 aa1.9□□□□□ -2.11
SLIRP-208ENST00000556956 CELA1Q9UNI1 258 aa1.9□□□□□ -2.11
SLIRP-208ENST00000556956 COL6A6A6NMZ7 2263 aa1.9□□□□□ -2.11
SLIRP-208ENST00000556956 TLN1Q9Y490 2541 aaKnown RBP1.9□□□□□ -2.11
SLIRP-208ENST00000556956 PIEZO2Q9H5I5 2752 aa1.9□□□□□ -2.11
SLIRP-208ENST00000556956 MGAQ8IWI9 3026 aa1.9□□□□□ -2.11
SLIRP-208ENST00000556956 ICE1Q9Y2F5 2266 aa1.89□□□□□ -2.11
SLIRP-208ENST00000556956 IGLV10-54A0A075B6I4 117 aa1.89□□□□□ -2.11
SLIRP-208ENST00000556956 A0A096LPF7 62 aa1.89□□□□□ -2.11
SLIRP-208ENST00000556956 LCE6AA0A183 80 aa1.89□□□□□ -2.11
SLIRP-208ENST00000556956 ETDCA0A1B0GVM5 59 aa1.89□□□□□ -2.11
SLIRP-208ENST00000556956 NDUFB1O75438 58 aa1.89□□□□□ -2.11
SLIRP-208ENST00000556956 DAD1P61803 113 aa1.89□□□□□ -2.11
SLIRP-208ENST00000556956 EGFEM1PQ0D2K5 195 aa1.89□□□□□ -2.11
SLIRP-208ENST00000556956 Q6ZRU5 148 aa1.89□□□□□ -2.11
SLIRP-208ENST00000556956 Q8NDZ9 215 aa1.89□□□□□ -2.11
SLIRP-208ENST00000556956 CYP4F30PQ9H0H9 118 aa1.89□□□□□ -2.11
SLIRP-208ENST00000556956 C6orf48Q9UBA6 75 aa1.89□□□□□ -2.11
SLIRP-208ENST00000556956 PRRC2CQ9Y520 2896 aaKnown RBP1.89□□□□□ -2.11
SLIRP-208ENST00000556956 BOD1L1Q8NFC6 3051 aa1.89□□□□□ -2.11
SLIRP-208ENST00000556956 ZZEF1O43149 2961 aa1.89□□□□□ -2.11
SLIRP-208ENST00000556956 ANKHD1Q8IWZ3 2542 aaKnown RBP1.88□□□□□ -2.11
SLIRP-208ENST00000556956 DSPP15924 2871 aaKnown RBP1.88□□□□□ -2.11
SLIRP-208ENST00000556956 HRNRQ86YZ3 2850 aaPredicted RBP1.88□□□□□ -2.11
SLIRP-208ENST00000556956 MAP1BP46821 2468 aaKnown RBP1.88□□□□□ -2.11
SLIRP-208ENST00000556956 ARHGAP32A7KAX9 2087 aa1.88□□□□□ -2.11
SLIRP-208ENST00000556956 NDUFAF8A1L188 74 aa1.88□□□□□ -2.11
SLIRP-208ENST00000556956 VPREB1P12018 145 aa1.88□□□□□ -2.11
SLIRP-208ENST00000556956 MAPK1IP1LQ8NDC0 245 aa1.88□□□□□ -2.11
SLIRP-208ENST00000556956 C1orf64Q8NEQ6 169 aa1.88□□□□□ -2.11
SLIRP-208ENST00000556956 CAMK2N2Q96S95 79 aa1.88□□□□□ -2.11
SLIRP-208ENST00000556956 PRR34Q9NV39 138 aa1.88□□□□□ -2.11
SLIRP-208ENST00000556956 DHRS4-AS1Q9P1J3 65 aa1.88□□□□□ -2.11
SLIRP-208ENST00000556956 DMXL2Q8TDJ6 3036 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms