RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 USP34Q70CQ2 3546 aa2.48□□□□□ -2.01
FOXN3-213ENST00000556916 PKDREJQ9NTG1 2253 aa2.47□□□□□ -2.01
FOXN3-213ENST00000556916 IGLV4-60A0A075B6I1 120 aa2.47□□□□□ -2.01
FOXN3-213ENST00000556916 TRBV6-8A0A0A6YYG3 113 aa2.47□□□□□ -2.01
FOXN3-213ENST00000556916 TRAV22A0A0B4J277 110 aa2.47□□□□□ -2.01
FOXN3-213ENST00000556916 TRGV4A0A0C4DH28 118 aa2.47□□□□□ -2.01
FOXN3-213ENST00000556916 NDUFB1O75438 58 aa2.47□□□□□ -2.01
FOXN3-213ENST00000556916 PRM2P04554 102 aa2.47□□□□□ -2.01
FOXN3-213ENST00000556916 CMC4P56277 68 aaPredicted RBP2.47□□□□□ -2.01
FOXN3-213ENST00000556916 PRR3P79522 188 aaKnown RBP2.47□□□□□ -2.01
FOXN3-213ENST00000556916 HIGD2BQ4VC39 106 aa2.47□□□□□ -2.01
FOXN3-213ENST00000556916 BRD3OSQ6XYD6 125 aa2.47□□□□□ -2.01
FOXN3-213ENST00000556916 Q6ZR54 194 aa2.47□□□□□ -2.01
FOXN3-213ENST00000556916 C1orf64Q8NEQ6 169 aa2.47□□□□□ -2.01
FOXN3-213ENST00000556916 DEFB124Q8NES8 71 aa2.47□□□□□ -2.01
FOXN3-213ENST00000556916 DIRC1Q969H9 104 aa2.47□□□□□ -2.01
FOXN3-213ENST00000556916 UBE2E2Q96LR5 201 aa2.47□□□□□ -2.01
FOXN3-213ENST00000556916 ESM1Q9NQ30 184 aa2.47□□□□□ -2.01
FOXN3-213ENST00000556916 CR1P17927 2039 aa2.46□□□□□ -2.02
FOXN3-213ENST00000556916 TRGV2A0A075B6R0 118 aa2.46□□□□□ -2.02
FOXN3-213ENST00000556916 PSPHP1O15172 72 aa2.46□□□□□ -2.02
FOXN3-213ENST00000556916 PSCAO43653 123 aa2.46□□□□□ -2.02
FOXN3-213ENST00000556916 IGLV6-57P01721 117 aa2.46□□□□□ -2.02
FOXN3-213ENST00000556916 ELOF1P60002 83 aaKnown RBP2.46□□□□□ -2.02
FOXN3-213ENST00000556916 SYCNQ0VAF6 134 aa2.46□□□□□ -2.02
FOXN3-213ENST00000556916 CSNK1G2-AS1Q8NCQ2 148 aa2.46□□□□□ -2.02
FOXN3-213ENST00000556916 C16orf74Q96GX8 76 aa2.46□□□□□ -2.02
FOXN3-213ENST00000556916 LIMD2Q9BT23 127 aa2.46□□□□□ -2.02
FOXN3-213ENST00000556916 RBM12B-AS1Q9P1G2 102 aa2.46□□□□□ -2.02
FOXN3-213ENST00000556916 LINC00588Q9Y4M8 146 aa2.46□□□□□ -2.02
FOXN3-213ENST00000556916 CEP250Q9BV73 2442 aa2.46□□□□□ -2.02
FOXN3-213ENST00000556916 FRYQ5TBA9 3013 aa2.45□□□□□ -2.02
FOXN3-213ENST00000556916 ETDCA0A1B0GVM5 59 aa2.45□□□□□ -2.02
FOXN3-213ENST00000556916 LRCOL1A6NCL2 159 aa2.45□□□□□ -2.02
FOXN3-213ENST00000556916 A8MUN3 132 aa2.45□□□□□ -2.02
FOXN3-213ENST00000556916 M0R378 163 aa2.45□□□□□ -2.02
FOXN3-213ENST00000556916 KRTAP1-4P0C5Y4 121 aa2.45□□□□□ -2.02
FOXN3-213ENST00000556916 KIAA0087Q14695 138 aa2.45□□□□□ -2.02
FOXN3-213ENST00000556916 ATP11AUNQ6ZP68 121 aa2.45□□□□□ -2.02
FOXN3-213ENST00000556916 LINC00269Q8N2A0 174 aa2.45□□□□□ -2.02
FOXN3-213ENST00000556916 ZCCHC13Q8WW36 166 aaKnown RBP2.45□□□□□ -2.02
FOXN3-213ENST00000556916 CFAP47Q6ZTR5 3102 aa2.45□□□□□ -2.02
FOXN3-213ENST00000556916 PCNX1Q96RV3 2341 aa2.45□□□□□ -2.02
FOXN3-213ENST00000556916 LOC100131303A0A0U1RQF7 123 aa2.44□□□□□ -2.02
FOXN3-213ENST00000556916 PHF5AQ7RTV0 110 aaKnown RBP2.44□□□□□ -2.02
FOXN3-213ENST00000556916 LINC01006Q8NI28 216 aa2.44□□□□□ -2.02
FOXN3-213ENST00000556916 NOP10Q9NPE3 64 aaKnown RBP2.44□□□□□ -2.02
FOXN3-213ENST00000556916 DHRS4-AS1Q9P1J3 65 aa2.44□□□□□ -2.02
FOXN3-213ENST00000556916 CELA1Q9UNI1 258 aa2.44□□□□□ -2.02
FOXN3-213ENST00000556916 LAMA2P24043 3122 aaKnown RBP2.44□□□□□ -2.02
FOXN3-213ENST00000556916 TNRC18O15417 2968 aaPredicted RBP2.43□□□□□ -2.02
FOXN3-213ENST00000556916 TRIOO75962 3097 aa2.43□□□□□ -2.02
FOXN3-213ENST00000556916 C16orf90A8MZG2 172 aa2.43□□□□□ -2.02
FOXN3-213ENST00000556916 H3BPC8 53 aa2.43□□□□□ -2.02
FOXN3-213ENST00000556916 CHKB-CPT1BH3BT56 60 aa2.43□□□□□ -2.02
FOXN3-213ENST00000556916 C19orf84I3L1E1 186 aa2.43□□□□□ -2.02
FOXN3-213ENST00000556916 RTL8CO15255 209 aa2.43□□□□□ -2.02
FOXN3-213ENST00000556916 ZNF73O43830 326 aaPredicted RBP2.43□□□□□ -2.02
FOXN3-213ENST00000556916 MP68P56378 58 aa2.43□□□□□ -2.02
FOXN3-213ENST00000556916 Q5VV11 94 aa2.43□□□□□ -2.02
FOXN3-213ENST00000556916 C10orf99Q6UWK7 81 aa2.43□□□□□ -2.02
FOXN3-213ENST00000556916 Q8N9L7 120 aa2.43□□□□□ -2.02
FOXN3-213ENST00000556916 CHCHD10Q8WYQ3 142 aaPredicted RBP2.43□□□□□ -2.02
FOXN3-213ENST00000556916 B9D2Q9BPU9 175 aa2.43□□□□□ -2.02
FOXN3-213ENST00000556916 Q9BRP9 147 aa2.43□□□□□ -2.02
FOXN3-213ENST00000556916 SORL1Q92673 2214 aa2.43□□□□□ -2.02
FOXN3-213ENST00000556916 ROS1P08922 2347 aa2.43□□□□□ -2.02
FOXN3-213ENST00000556916 ATRXP46100 2492 aa2.43□□□□□ -2.02
FOXN3-213ENST00000556916 PKD1L2Q7Z442 2459 aa2.43□□□□□ -2.02
FOXN3-213ENST00000556916 CFAP54Q96N23 3096 aa2.43□□□□□ -2.02
FOXN3-213ENST00000556916 NBEAQ8NFP9 2946 aa2.42□□□□□ -2.02
FOXN3-213ENST00000556916 XIRP2A4UGR9 3374 aa2.42□□□□□ -2.02
FOXN3-213ENST00000556916 CNOT1A5YKK6 2376 aaKnown RBP2.42□□□□□ -2.02
FOXN3-213ENST00000556916 SPTBN1Q01082 2364 aaKnown RBP2.42□□□□□ -2.02
FOXN3-213ENST00000556916 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.42□□□□□ -2.02
FOXN3-213ENST00000556916 GVQW2A0A096LPI5 108 aaPredicted RBP2.42□□□□□ -2.02
FOXN3-213ENST00000556916 HCG22E2RYF7 251 aa2.42□□□□□ -2.02
FOXN3-213ENST00000556916 MSMBP08118 114 aa2.42□□□□□ -2.02
FOXN3-213ENST00000556916 APOC4P55056 127 aa2.42□□□□□ -2.02
FOXN3-213ENST00000556916 C9orf116Q5BN46 136 aaPredicted RBP2.42□□□□□ -2.02
FOXN3-213ENST00000556916 SPANXA2-OT1Q8N9U9 137 aa2.42□□□□□ -2.02
FOXN3-213ENST00000556916 Q8NDZ9 215 aa2.42□□□□□ -2.02
FOXN3-213ENST00000556916 C4orf3Q8WVX3 66 aa2.42□□□□□ -2.02
FOXN3-213ENST00000556916 APC2O95996 2303 aa2.42□□□□□ -2.02
FOXN3-213ENST00000556916 CACNA1BQ00975 2339 aa2.42□□□□□ -2.02
FOXN3-213ENST00000556916 FRYLO94915 3013 aa2.42□□□□□ -2.02
FOXN3-213ENST00000556916 ABCA2Q9BZC7 2435 aa2.41□□□□□ -2.02
FOXN3-213ENST00000556916 KALRNO60229 2985 aa2.41□□□□□ -2.02
FOXN3-213ENST00000556916 IGLV5-48A0A075B6I7 105 aa2.41□□□□□ -2.02
FOXN3-213ENST00000556916 LOC101927531A0A1B0GV80 90 aa2.41□□□□□ -2.02
FOXN3-213ENST00000556916 A6NN06 94 aa2.41□□□□□ -2.02
FOXN3-213ENST00000556916 B4DSR2 109 aa2.41□□□□□ -2.02
FOXN3-213ENST00000556916 PRB1P04280 392 aa2.41□□□□□ -2.02
FOXN3-213ENST00000556916 REG3AQ06141 175 aa2.41□□□□□ -2.02
FOXN3-213ENST00000556916 SPAG11BQ08648 103 aa2.41□□□□□ -2.02
FOXN3-213ENST00000556916 DEFB112Q30KQ8 113 aa2.41□□□□□ -2.02
FOXN3-213ENST00000556916 UNQ6190/PRO20217Q6UXQ8 127 aa2.41□□□□□ -2.02
FOXN3-213ENST00000556916 C7orf65Q6ZTY9 151 aa2.41□□□□□ -2.02
FOXN3-213ENST00000556916 LCA10Q71F78 164 aa2.41□□□□□ -2.02
FOXN3-213ENST00000556916 SPTSSBQ8NFR3 76 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms