RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 C1orf137Q5JT78 98 aa15.13■□□□□ 0.01
SDR39U1-221ENST00000556707 MRPL55Q7Z7F7 128 aaKnown RBP15.13■□□□□ 0.01
SDR39U1-221ENST00000556707 SMIM13P0DJ93 91 aa15.12■□□□□ 0.01
SDR39U1-221ENST00000556707 MEIG1Q5JSS6 88 aa15.12■□□□□ 0.01
SDR39U1-221ENST00000556707 A0A0U1RRA0 63 aa15.11■□□□□ 0.01
SDR39U1-221ENST00000556707 LINC00587B1AMM8 73 aa15.11■□□□□ 0.01
SDR39U1-221ENST00000556707 E9PLD3 99 aa15.11■□□□□ 0.01
SDR39U1-221ENST00000556707 LGALS3P17931 250 aaKnown RBP15.11■□□□□ 0.01
SDR39U1-221ENST00000556707 NMUP48645 174 aa15.11■□□□□ 0.01
SDR39U1-221ENST00000556707 OXTP01178 125 aa15.1■□□□□ 0.01
SDR39U1-221ENST00000556707 SRSF9Q13242 221 aaKnown RBP eCLIP15.1■□□□□ 0.014e-6■□□□□ 8.5
SDR39U1-221ENST00000556707 HIST3H2BBQ8N257 126 aa15.1■□□□□ 0.01
SDR39U1-221ENST00000556707 NKAPP1Q8N9T2 125 aa15.1■□□□□ 0.01
SDR39U1-221ENST00000556707 LRP1Q07954 4544 aaKnown RBP15.1■□□□□ 0.01
SDR39U1-221ENST00000556707 SPINK6Q6UWN8 80 aa15.09■□□□□ 0.01
SDR39U1-221ENST00000556707 S100A6P06703 90 aa15.08■□□□□ 0
SDR39U1-221ENST00000556707 LINC00167Q96N53 147 aa15.08■□□□□ 0
SDR39U1-221ENST00000556707 C20orf202A1L168 122 aa15.07■□□□□ 0
SDR39U1-221ENST00000556707 VPREB1P12018 145 aa15.07■□□□□ 0
SDR39U1-221ENST00000556707 IGLV7-43P04211 117 aa15.06■□□□□ 0
SDR39U1-221ENST00000556707 S100A2P29034 98 aa15.06■□□□□ 0
SDR39U1-221ENST00000556707 RPL24P83731 157 aaKnown RBP15.06■□□□□ 0
SDR39U1-221ENST00000556707 MIR7-3HGQ8N6C7 128 aa15.06■□□□□ 0
SDR39U1-221ENST00000556707 FAT3Q8TDW7 4589 aa15.05■□□□□ 0
SDR39U1-221ENST00000556707 J3QL48 77 aa15.05■□□□□ -0
SDR39U1-221ENST00000556707 HIST1H2BLQ99880 126 aa15.05■□□□□ -0
SDR39U1-221ENST00000556707 GAGE10A6NGK3 116 aa15.04■□□□□ -0
SDR39U1-221ENST00000556707 Q8NDZ9 215 aa15.03■□□□□ -0
SDR39U1-221ENST00000556707 RPL37AP8A6NKH3 93 aa15.02■□□□□ -0
SDR39U1-221ENST00000556707 AKR1D1P51857 326 aa15□□□□□ -0.01
SDR39U1-221ENST00000556707 SNRPEP62304 92 aaKnown RBP14.99□□□□□ -0.01
SDR39U1-221ENST00000556707 IGKV2D-26A0A0A0MRZ7 120 aa14.98□□□□□ -0.01
SDR39U1-221ENST00000556707 A0A0J9YXY3 114 aa14.98□□□□□ -0.01
SDR39U1-221ENST00000556707 BOD1L2Q8IYS8 172 aa14.98□□□□□ -0.01
SDR39U1-221ENST00000556707 REG3GQ6UW15 175 aa14.97□□□□□ -0.01
SDR39U1-221ENST00000556707 DAND5Q8N907 189 aa14.97□□□□□ -0.01
SDR39U1-221ENST00000556707 ATOH7Q8N100 152 aa14.96□□□□□ -0.01
SDR39U1-221ENST00000556707 DIRC1Q969H9 104 aa14.96□□□□□ -0.01
SDR39U1-221ENST00000556707 IGLV1-50A0A075B6I6 118 aa14.95□□□□□ -0.02
SDR39U1-221ENST00000556707 IGKV2-28A0A075B6P5 120 aa14.95□□□□□ -0.02
SDR39U1-221ENST00000556707 LOC107984156A0A0G2JMH3 177 aa14.95□□□□□ -0.02
SDR39U1-221ENST00000556707 IGKV2D-28P01615 120 aa14.95□□□□□ -0.02
SDR39U1-221ENST00000556707 ARL17AQ8IVW1 177 aa14.95□□□□□ -0.02
SDR39U1-221ENST00000556707 C5orf52A6NGY3 159 aa14.94□□□□□ -0.02
SDR39U1-221ENST00000556707 BCE1O60756 84 aa14.94□□□□□ -0.02
SDR39U1-221ENST00000556707 ZNF815PA8K554 130 aa14.93□□□□□ -0.02
SDR39U1-221ENST00000556707 M0R378 163 aa14.93□□□□□ -0.02
SDR39U1-221ENST00000556707 ANKRD39Q53RE8 183 aa14.92□□□□□ -0.02
SDR39U1-221ENST00000556707 LINC01600Q96MT4 127 aa14.92□□□□□ -0.02
SDR39U1-221ENST00000556707 TTTY13Q9BZ97 58 aa14.92□□□□□ -0.02
SDR39U1-221ENST00000556707 H0Y9J4 135 aa14.91□□□□□ -0.02
SDR39U1-221ENST00000556707 ZNF861PO60384 105 aa14.91□□□□□ -0.02
SDR39U1-221ENST00000556707 ADAMTSL4-AS1Q5T5F5 129 aa14.91□□□□□ -0.02
SDR39U1-221ENST00000556707 MT1HL1P0DM35 61 aa14.9□□□□□ -0.02
SDR39U1-221ENST00000556707 MIEN1Q9BRT3 115 aa14.9□□□□□ -0.02
SDR39U1-221ENST00000556707 HERC1Q15751 4861 aa14.9□□□□□ -0.02
SDR39U1-221ENST00000556707 TIMM17BO60830 172 aa14.89□□□□□ -0.03
SDR39U1-221ENST00000556707 NCR3O14931 201 aa14.88□□□□□ -0.03
SDR39U1-221ENST00000556707 LITAFQ99732 161 aa14.88□□□□□ -0.03
SDR39U1-221ENST00000556707 RPL28P46779 137 aaKnown RBP14.87□□□□□ -0.03
SDR39U1-221ENST00000556707 TMEM238C9JI98 176 aa14.86□□□□□ -0.03
SDR39U1-221ENST00000556707 TMEM126AQ9H061 195 aa14.86□□□□□ -0.03
SDR39U1-221ENST00000556707 SOSTDC1Q6X4U4 206 aa14.85□□□□□ -0.03
SDR39U1-221ENST00000556707 EIF4EBP3O60516 100 aaPredicted RBP14.83□□□□□ -0.04
SDR39U1-221ENST00000556707 NDUFC2O95298 119 aa14.83□□□□□ -0.04
SDR39U1-221ENST00000556707 UBE2AP49459 152 aa14.83□□□□□ -0.04
SDR39U1-221ENST00000556707 NPC2P61916 151 aa14.83□□□□□ -0.04
SDR39U1-221ENST00000556707 KRTAP13-1Q8IUC0 172 aa14.83□□□□□ -0.04
SDR39U1-221ENST00000556707 TRBV10-2A0A0K0K1G8 114 aa14.82□□□□□ -0.04
SDR39U1-221ENST00000556707 SCGB1D4Q6XE38 83 aa14.81□□□□□ -0.04
SDR39U1-221ENST00000556707 PCP2Q8IVA1 136 aa14.81□□□□□ -0.04
SDR39U1-221ENST00000556707 SPANXB1Q9NS25 103 aaPredicted RBP14.81□□□□□ -0.04
SDR39U1-221ENST00000556707 HSBP1L1C9JCN9 74 aa14.8□□□□□ -0.04
SDR39U1-221ENST00000556707 LINC00308Q8TCZ7 52 aa14.8□□□□□ -0.04
SDR39U1-221ENST00000556707 TRBV10-3A0A0K0K1G6 114 aa14.79□□□□□ -0.04
SDR39U1-221ENST00000556707 PRYO14603 147 aa14.79□□□□□ -0.04
SDR39U1-221ENST00000556707 SCGB1D1O95968 90 aa14.79□□□□□ -0.04
SDR39U1-221ENST00000556707 KRTAP10-8P60410 259 aa14.79□□□□□ -0.04
SDR39U1-221ENST00000556707 FAM19A1Q7Z5A9 133 aa14.79□□□□□ -0.04
SDR39U1-221ENST00000556707 KRTAP1-4P0C5Y4 121 aa14.78□□□□□ -0.04
SDR39U1-221ENST00000556707 KCNQ1DNQ9H478 68 aa14.78□□□□□ -0.04
SDR39U1-221ENST00000556707 TNXBP22105 4242 aa14.77□□□□□ -0.04
SDR39U1-221ENST00000556707 PRLHP81277 87 aa14.76□□□□□ -0.05
SDR39U1-221ENST00000556707 DDTP30046 118 aa14.75□□□□□ -0.05
SDR39U1-221ENST00000556707 SPANXDQ9BXN6 97 aa14.75□□□□□ -0.05
SDR39U1-221ENST00000556707 SPANXCQ9NY87 97 aa14.75□□□□□ -0.05
SDR39U1-221ENST00000556707 SPRR1AP35321 89 aa14.73□□□□□ -0.05
SDR39U1-221ENST00000556707 S100A12P80511 92 aa14.73□□□□□ -0.05
SDR39U1-221ENST00000556707 S100A7L2Q5SY68 101 aa14.72□□□□□ -0.05
SDR39U1-221ENST00000556707 IGLV6-57P01721 117 aa14.71□□□□□ -0.05
SDR39U1-221ENST00000556707 LINC00337Q8N6G1 96 aa14.71□□□□□ -0.05
SDR39U1-221ENST00000556707 PRR26Q8N8Z3 221 aa14.71□□□□□ -0.05
SDR39U1-221ENST00000556707 KRTAP4-16G5E9R7 235 aaPredicted RBP14.69□□□□□ -0.06
SDR39U1-221ENST00000556707 Q6ZVH6 145 aa14.69□□□□□ -0.06
SDR39U1-221ENST00000556707 COPS9Q8WXC6 57 aa14.69□□□□□ -0.06
SDR39U1-221ENST00000556707 IFITM1P13164 125 aa14.68□□□□□ -0.06
SDR39U1-221ENST00000556707 ETDCA0A1B0GVM5 59 aa14.67□□□□□ -0.06
SDR39U1-221ENST00000556707 PPDPFQ9H3Y8 114 aa14.67□□□□□ -0.06
SDR39U1-221ENST00000556707 HIGD2AQ9BW72 106 aa14.65□□□□□ -0.06
SDR39U1-221ENST00000556707 LINC00518Q8N0U6 118 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 182.7 ms