RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 EPM2AB3EWF7 344 aa8.9□□□□□ -0.98
SNX6-206ENST00000556162 FAM19A5Q7Z5A7 132 aaPredicted RBP8.9□□□□□ -0.98
SNX6-206ENST00000556162 C7orf33Q8WU49 177 aa8.89□□□□□ -0.99
SNX6-206ENST00000556162 SND1-IT1Q9HBX3 110 aa8.89□□□□□ -0.99
SNX6-206ENST00000556162 VPS13BQ7Z7G8 4022 aa8.89□□□□□ -0.99
SNX6-206ENST00000556162 ZNF815PA8K554 130 aa8.88□□□□□ -0.99
SNX6-206ENST00000556162 A0A0J9YXY3 114 aa8.87□□□□□ -0.99
SNX6-206ENST00000556162 DDTP30046 118 aa8.87□□□□□ -0.99
SNX6-206ENST00000556162 Q5VSD8 79 aa8.87□□□□□ -0.99
SNX6-206ENST00000556162 MIR7-3HGQ8N6C7 128 aa8.87□□□□□ -0.99
SNX6-206ENST00000556162 KRTAP17-1Q9BYP8 105 aa8.87□□□□□ -0.99
SNX6-206ENST00000556162 SERTAD4-AS1Q5TG53 156 aa8.87□□□□□ -0.99
SNX6-206ENST00000556162 KRTAP7-1Q8IUC3 87 aa8.87□□□□□ -0.99
SNX6-206ENST00000556162 TTTY13Q9BZ97 58 aa8.87□□□□□ -0.99
SNX6-206ENST00000556162 M0QXV9 152 aa8.86□□□□□ -0.99
SNX6-206ENST00000556162 PHF5AQ7RTV0 110 aaKnown RBP8.86□□□□□ -0.99
SNX6-206ENST00000556162 PLA2G2DQ9UNK4 145 aa8.86□□□□□ -0.99
SNX6-206ENST00000556162 PLA2G1BP04054 148 aaKnown RBP8.85□□□□□ -0.99
SNX6-206ENST00000556162 PRO1933Q9H354 126 aa8.85□□□□□ -0.99
SNX6-206ENST00000556162 C22orf24Q9Y442 160 aa8.85□□□□□ -0.99
SNX6-206ENST00000556162 RPL37AP61513 92 aaKnown RBP8.84□□□□□ -0.99
SNX6-206ENST00000556162 RPL24P83731 157 aaKnown RBP8.84□□□□□ -0.99
SNX6-206ENST00000556162 PCP2Q8IVA1 136 aa8.84□□□□□ -0.99
SNX6-206ENST00000556162 DAND5Q8N907 189 aa8.84□□□□□ -0.99
SNX6-206ENST00000556162 LBHQ53QV2 105 aaPredicted RBP8.83□□□□□ -1
SNX6-206ENST00000556162 SCGB1D4Q6XE38 83 aa8.83□□□□□ -1
SNX6-206ENST00000556162 NKAPP1Q8N9T2 125 aa8.83□□□□□ -1
SNX6-206ENST00000556162 C14orf144Q96I85 54 aa8.83□□□□□ -1
SNX6-206ENST00000556162 TP73-AS1Q9UF72 201 aa8.83□□□□□ -1
SNX6-206ENST00000556162 TIMM17BO60830 172 aa8.82□□□□□ -1
SNX6-206ENST00000556162 UBE2BP63146 152 aa8.82□□□□□ -1
SNX6-206ENST00000556162 IGLV5-37A0A075B6J1 123 aa8.81□□□□□ -1
SNX6-206ENST00000556162 ADAMTSL4-AS1Q5T5F5 129 aa8.81□□□□□ -1
SNX6-206ENST00000556162 MRPL55Q7Z7F7 128 aaKnown RBP8.81□□□□□ -1
SNX6-206ENST00000556162 BOD1L2Q8IYS8 172 aa8.81□□□□□ -1
SNX6-206ENST00000556162 MIEN1Q9BRT3 115 aa8.81□□□□□ -1
SNX6-206ENST00000556162 ABCA13Q86UQ4 5058 aa8.81□□□□□ -1
SNX6-206ENST00000556162 SRRM2Q9UQ35 2752 aaKnown RBP8.81□□□□□ -1
SNX6-206ENST00000556162 VPREB1P12018 145 aa8.81□□□□□ -1
SNX6-206ENST00000556162 LOC107984156A0A0G2JMH3 177 aa8.8□□□□□ -1
SNX6-206ENST00000556162 ARL17AQ8IVW1 177 aa8.8□□□□□ -1
SNX6-206ENST00000556162 LITAFQ99732 161 aa8.8□□□□□ -1
SNX6-206ENST00000556162 VAMP8Q9BV40 100 aa8.8□□□□□ -1
SNX6-206ENST00000556162 KRTAP4-5Q9BYR2 181 aa8.8□□□□□ -1
SNX6-206ENST00000556162 TMEM238C9JI98 176 aa8.79□□□□□ -1
SNX6-206ENST00000556162 LINC00167Q96N53 147 aa8.79□□□□□ -1
SNX6-206ENST00000556162 PAM16Q9Y3D7 125 aa8.79□□□□□ -1
SNX6-206ENST00000556162 GAGE10A6NGK3 116 aa8.78□□□□□ -1
SNX6-206ENST00000556162 NPC2P61916 151 aa8.78□□□□□ -1
SNX6-206ENST00000556162 SPATA45Q537H7 98 aa8.78□□□□□ -1
SNX6-206ENST00000556162 Q8NDZ9 215 aa8.78□□□□□ -1
SNX6-206ENST00000556162 PSORS1C2Q9UIG4 136 aa8.78□□□□□ -1
SNX6-206ENST00000556162 KRTAP10-4P60372 401 aaPredicted RBP8.77□□□□□ -1.01
SNX6-206ENST00000556162 PRR3P79522 188 aaKnown RBP8.77□□□□□ -1.01
SNX6-206ENST00000556162 RPL37AP8A6NKH3 93 aa8.77□□□□□ -1.01
SNX6-206ENST00000556162 KRTAP11-1Q8IUC1 163 aa8.77□□□□□ -1.01
SNX6-206ENST00000556162 COX8AP10176 69 aa8.76□□□□□ -1.01
SNX6-206ENST00000556162 LINC00308Q8TCZ7 52 aa8.76□□□□□ -1.01
SNX6-206ENST00000556162 M0R378 163 aa8.75□□□□□ -1.01
SNX6-206ENST00000556162 C1orf137Q5JT78 98 aa8.75□□□□□ -1.01
SNX6-206ENST00000556162 SOSTDC1Q6X4U4 206 aa8.75□□□□□ -1.01
SNX6-206ENST00000556162 Q6ZVH6 145 aa8.75□□□□□ -1.01
SNX6-206ENST00000556162 SPANXDQ9BXN6 97 aa8.75□□□□□ -1.01
SNX6-206ENST00000556162 SPANXCQ9NY87 97 aa8.75□□□□□ -1.01
SNX6-206ENST00000556162 NCR3O14931 201 aa8.74□□□□□ -1.01
SNX6-206ENST00000556162 EIF4EBP3O60516 100 aaPredicted RBP8.74□□□□□ -1.01
SNX6-206ENST00000556162 NDUFC2O95298 119 aa8.74□□□□□ -1.01
SNX6-206ENST00000556162 COPS9Q8WXC6 57 aa8.74□□□□□ -1.01
SNX6-206ENST00000556162 IGKV2-28A0A075B6P5 120 aa8.73□□□□□ -1.01
SNX6-206ENST00000556162 IGKV2D-28P01615 120 aa8.73□□□□□ -1.01
SNX6-206ENST00000556162 INAFM2P0DMQ5 153 aa8.73□□□□□ -1.01
SNX6-206ENST00000556162 PCLOQ9Y6V0 5065 aa8.73□□□□□ -1.01
SNX6-206ENST00000556162 IGLV1-50A0A075B6I6 118 aa8.72□□□□□ -1.01
SNX6-206ENST00000556162 DLEU1O43261 78 aa8.72□□□□□ -1.01
SNX6-206ENST00000556162 IFITM1P13164 125 aa8.72□□□□□ -1.01
SNX6-206ENST00000556162 SPANXB1Q9NS25 103 aaPredicted RBP8.72□□□□□ -1.01
SNX6-206ENST00000556162 TRBV10-2A0A0K0K1G8 114 aa8.72□□□□□ -1.01
SNX6-206ENST00000556162 SRSF9Q13242 221 aaKnown RBP eCLIP8.72□□□□□ -1.011e-7■■■■□ 24.7
SNX6-206ENST00000556162 M0R143 59 aa8.7□□□□□ -1.02
SNX6-206ENST00000556162 SLC25A34Q6PIV7 304 aa8.7□□□□□ -1.02
SNX6-206ENST00000556162 A0A1B0GV90 55 aa8.7□□□□□ -1.02
SNX6-206ENST00000556162 MUSTN1Q8IVN3 82 aa8.7□□□□□ -1.02
SNX6-206ENST00000556162 PKHD1L1Q86WI1 4243 aa8.69□□□□□ -1.02
SNX6-206ENST00000556162 IGLV7-43P04211 117 aa8.69□□□□□ -1.02
SNX6-206ENST00000556162 HNRNPA3P51991 378 aaKnown RBP8.69□□□□□ -1.02
SNX6-206ENST00000556162 PPDPFQ9H3Y8 114 aa8.69□□□□□ -1.02
SNX6-206ENST00000556162 S100A7L2Q5SY68 101 aa8.68□□□□□ -1.02
SNX6-206ENST00000556162 TRBV10-3A0A0K0K1G6 114 aa8.68□□□□□ -1.02
SNX6-206ENST00000556162 BCE1O60756 84 aa8.68□□□□□ -1.02
SNX6-206ENST00000556162 REG3GQ6UW15 175 aa8.68□□□□□ -1.02
SNX6-206ENST00000556162 SNHG12Q9BXW3 62 aa8.67□□□□□ -1.02
SNX6-206ENST00000556162 TMEM126AQ9H061 195 aa8.67□□□□□ -1.02
SNX6-206ENST00000556162 C4orf48Q5BLP8 95 aa8.66□□□□□ -1.02
SNX6-206ENST00000556162 SPINK6Q6UWN8 80 aa8.66□□□□□ -1.02
SNX6-206ENST00000556162 HIST1H4GQ99525 98 aa8.66□□□□□ -1.02
SNX6-206ENST00000556162 KCNQ1DNQ9H478 68 aa8.66□□□□□ -1.02
SNX6-206ENST00000556162 HIGD1BQ9P298 99 aa8.66□□□□□ -1.02
SNX6-206ENST00000556162 PRYO14603 147 aa8.65□□□□□ -1.02
SNX6-206ENST00000556162 OR13C6PQ8NH95 151 aa8.65□□□□□ -1.02
SNX6-206ENST00000556162 UQCR10Q9UDW1 63 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms