RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 ZNF625Q96I27 306 aaPredicted RBP8.2□□□□□ -1.1
PCNX4-209ENST00000555569 CHTOPQ9Y3Y2 248 aaKnown RBP8.2□□□□□ -1.1
PCNX4-209ENST00000555569 IGKV2-28A0A075B6P5 120 aa8.19□□□□□ -1.1
PCNX4-209ENST00000555569 IGKV2D-28P01615 120 aa8.19□□□□□ -1.1
PCNX4-209ENST00000555569 VPREB1P12018 145 aa8.19□□□□□ -1.1
PCNX4-209ENST00000555569 UBE2AP49459 152 aa8.19□□□□□ -1.1
PCNX4-209ENST00000555569 IFI27L1Q96BM0 104 aa8.19□□□□□ -1.1
PCNX4-209ENST00000555569 CHCHD1Q96BP2 118 aaKnown RBP8.19□□□□□ -1.1
PCNX4-209ENST00000555569 RPL24P83731 157 aaKnown RBP8.18□□□□□ -1.1
PCNX4-209ENST00000555569 KRTAP13-1Q8IUC0 172 aa8.18□□□□□ -1.1
PCNX4-209ENST00000555569 A0A087X002 238 aa8.17□□□□□ -1.1
PCNX4-209ENST00000555569 TRAV12-1A0A0B4J245 112 aa8.17□□□□□ -1.1
PCNX4-209ENST00000555569 CRYGAP11844 174 aa8.17□□□□□ -1.1
PCNX4-209ENST00000555569 TMEM223A0PJW6 202 aa8.16□□□□□ -1.1
PCNX4-209ENST00000555569 LPAP08519 4548 aa8.16□□□□□ -1.1
PCNX4-209ENST00000555569 PRR4Q16378 134 aa8.15□□□□□ -1.1
PCNX4-209ENST00000555569 TYMSOSQ8TAI1 123 aa8.15□□□□□ -1.1
PCNX4-209ENST00000555569 TMEM238C9JI98 176 aa8.14□□□□□ -1.11
PCNX4-209ENST00000555569 LINC00158P58513 81 aa8.14□□□□□ -1.11
PCNX4-209ENST00000555569 CBLN2Q8IUK8 224 aa8.14□□□□□ -1.11
PCNX4-209ENST00000555569 Q8NDZ9 215 aa8.14□□□□□ -1.11
PCNX4-209ENST00000555569 TMEM126AQ9H061 195 aa8.14□□□□□ -1.11
PCNX4-209ENST00000555569 ANAPC11Q9NYG5 84 aa8.14□□□□□ -1.11
PCNX4-209ENST00000555569 HSBP1O75506 76 aa8.13□□□□□ -1.11
PCNX4-209ENST00000555569 TSPAN13O95857 204 aa8.13□□□□□ -1.11
PCNX4-209ENST00000555569 PRLHP81277 87 aa8.13□□□□□ -1.11
PCNX4-209ENST00000555569 FAM19A1Q7Z5A9 133 aa8.13□□□□□ -1.11
PCNX4-209ENST00000555569 A0A0U1RRA0 63 aa8.12□□□□□ -1.11
PCNX4-209ENST00000555569 M0R378 163 aa8.12□□□□□ -1.11
PCNX4-209ENST00000555569 FAM19A2Q8N3H0 131 aa8.12□□□□□ -1.11
PCNX4-209ENST00000555569 FAM229BQ4G0N7 80 aa8.11□□□□□ -1.11
PCNX4-209ENST00000555569 KRTAP13-2Q52LG2 175 aa8.11□□□□□ -1.11
PCNX4-209ENST00000555569 ATP6V1G1O75348 118 aa8.1□□□□□ -1.11
PCNX4-209ENST00000555569 TRGC2P03986 189 aa8.1□□□□□ -1.11
PCNX4-209ENST00000555569 SMIM13P0DJ93 91 aa8.1□□□□□ -1.11
PCNX4-209ENST00000555569 HERV-K104P63124 156 aa8.09□□□□□ -1.11
PCNX4-209ENST00000555569 MEIG1Q5JSS6 88 aa8.09□□□□□ -1.11
PCNX4-209ENST00000555569 H0Y8G0 127 aa8.08□□□□□ -1.12
PCNX4-209ENST00000555569 NDUFA12Q9UI09 145 aa8.08□□□□□ -1.12
PCNX4-209ENST00000555569 RNF213Q63HN8 5207 aa8.08□□□□□ -1.12
PCNX4-209ENST00000555569 IGKV2D-26A0A0A0MRZ7 120 aa8.07□□□□□ -1.12
PCNX4-209ENST00000555569 SERF1AO75920 110 aa8.07□□□□□ -1.12
PCNX4-209ENST00000555569 LEPROTL1O95214 131 aa8.07□□□□□ -1.12
PCNX4-209ENST00000555569 LINC00310P59036 64 aa8.07□□□□□ -1.12
PCNX4-209ENST00000555569 MYMXA0A1B0GTQ4 84 aa8.06□□□□□ -1.12
PCNX4-209ENST00000555569 LINC00587B1AMM8 73 aa8.06□□□□□ -1.12
PCNX4-209ENST00000555569 BOD1L2Q8IYS8 172 aa8.06□□□□□ -1.12
PCNX4-209ENST00000555569 MIR7-3HGQ8N6C7 128 aa8.06□□□□□ -1.12
PCNX4-209ENST00000555569 LINC00304Q8N9R0 145 aa8.06□□□□□ -1.12
PCNX4-209ENST00000555569 PLEKHB2Q96CS7 222 aa8.06□□□□□ -1.12
PCNX4-209ENST00000555569 HIGD2AQ9BW72 106 aa8.05□□□□□ -1.12
PCNX4-209ENST00000555569 PRYO14603 147 aa8.04□□□□□ -1.12
PCNX4-209ENST00000555569 NCR3O14931 201 aa8.04□□□□□ -1.12
PCNX4-209ENST00000555569 LEPROTO15243 131 aa8.04□□□□□ -1.12
PCNX4-209ENST00000555569 MAP1LC3CQ9BXW4 147 aa8.04□□□□□ -1.12
PCNX4-209ENST00000555569 HSPB8Q9UJY1 196 aa8.04□□□□□ -1.12
PCNX4-209ENST00000555569 PLNP26678 52 aa8.03□□□□□ -1.12
PCNX4-209ENST00000555569 TSPEAR-AS2P59090 65 aa8.03□□□□□ -1.12
PCNX4-209ENST00000555569 SLC7A5P1Q8MH63 180 aa8.03□□□□□ -1.12
PCNX4-209ENST00000555569 FABP4P15090 132 aa8.02□□□□□ -1.13
PCNX4-209ENST00000555569 KCNQ1DNQ9H478 68 aa8.02□□□□□ -1.13
PCNX4-209ENST00000555569 DPM2O94777 84 aa8.01□□□□□ -1.13
PCNX4-209ENST00000555569 HERVK_113P61574 105 aa8.01□□□□□ -1.13
PCNX4-209ENST00000555569 C3orf22Q8N5N4 141 aa8.01□□□□□ -1.13
PCNX4-209ENST00000555569 LINC00337Q8N6G1 96 aa8.01□□□□□ -1.13
PCNX4-209ENST00000555569 SPRR4Q96PI1 79 aa8.01□□□□□ -1.13
PCNX4-209ENST00000555569 TRBV10-3A0A0K0K1G6 114 aa8□□□□□ -1.13
PCNX4-209ENST00000555569 COLCA2A8K830 154 aa8□□□□□ -1.13
PCNX4-209ENST00000555569 J3QQQ9 107 aa8□□□□□ -1.13
PCNX4-209ENST00000555569 SPRR1AP35321 89 aa8□□□□□ -1.13
PCNX4-209ENST00000555569 CTAG1AP78358 180 aa8□□□□□ -1.13
PCNX4-209ENST00000555569 PMCHL2Q9BQD1 86 aa8□□□□□ -1.13
PCNX4-209ENST00000555569 KRTAP4-7Q9BYR0 210 aa8□□□□□ -1.13
PCNX4-209ENST00000555569 ZNF706Q9Y5V0 76 aaPredicted RBP8□□□□□ -1.13
PCNX4-209ENST00000555569 LOC107984156A0A0G2JMH3 177 aa7.99□□□□□ -1.13
PCNX4-209ENST00000555569 ETDCA0A1B0GVM5 59 aa7.99□□□□□ -1.13
PCNX4-209ENST00000555569 IGKCP01834 107 aa7.99□□□□□ -1.13
PCNX4-209ENST00000555569 ARL17AQ8IVW1 177 aa7.99□□□□□ -1.13
PCNX4-209ENST00000555569 DAND5Q8N907 189 aa7.99□□□□□ -1.13
PCNX4-209ENST00000555569 RETNLBQ9BQ08 111 aa7.99□□□□□ -1.13
PCNX4-209ENST00000555569 KRTAP4-16G5E9R7 235 aaPredicted RBP7.98□□□□□ -1.13
PCNX4-209ENST00000555569 NMUP48645 174 aa7.98□□□□□ -1.13
PCNX4-209ENST00000555569 LGALS3P17931 250 aaKnown RBP7.97□□□□□ -1.13
PCNX4-209ENST00000555569 S100A12P80511 92 aa7.97□□□□□ -1.13
PCNX4-209ENST00000555569 SMCR5Q8TEV8 140 aa7.97□□□□□ -1.13
PCNX4-209ENST00000555569 TRBV10-2A0A0K0K1G8 114 aa7.96□□□□□ -1.14
PCNX4-209ENST00000555569 DDTP30046 118 aa7.95□□□□□ -1.14
PCNX4-209ENST00000555569 SPAG11AQ6PDA7 123 aa7.95□□□□□ -1.14
PCNX4-209ENST00000555569 MIEN1Q9BRT3 115 aa7.95□□□□□ -1.14
PCNX4-209ENST00000555569 PPDPFQ9H3Y8 114 aa7.94□□□□□ -1.14
PCNX4-209ENST00000555569 SPANXB1Q9NS25 103 aaPredicted RBP7.94□□□□□ -1.14
PCNX4-209ENST00000555569 IGLV7-46A0A075B6I9 117 aa7.93□□□□□ -1.14
PCNX4-209ENST00000555569 B5MCH6 92 aa7.93□□□□□ -1.14
PCNX4-209ENST00000555569 E9PLD3 99 aa7.92□□□□□ -1.14
PCNX4-209ENST00000555569 NDUFC2O95298 119 aa7.92□□□□□ -1.14
PCNX4-209ENST00000555569 C4orf48Q5BLP8 95 aa7.92□□□□□ -1.14
PCNX4-209ENST00000555569 A0A0J9YXY3 114 aa7.91□□□□□ -1.14
PCNX4-209ENST00000555569 TPRXLQ17RH7 258 aa7.91□□□□□ -1.14
PCNX4-209ENST00000555569 LINC00483Q53H64 154 aa7.91□□□□□ -1.14
PCNX4-209ENST00000555569 S100A7L2Q5SY68 101 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms