RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 ATP6V1G1O75348 118 aa14.49□□□□□ -0.09
PRKCH-216ENST00000555542 TYMSOSQ8TAI1 123 aa14.49□□□□□ -0.09
PRKCH-216ENST00000555542 TMEM238C9JI98 176 aa14.48□□□□□ -0.09
PRKCH-216ENST00000555542 PRLHP81277 87 aa14.48□□□□□ -0.09
PRKCH-216ENST00000555542 PRR4Q16378 134 aa14.48□□□□□ -0.09
PRKCH-216ENST00000555542 KRTAP13-1Q8IUC0 172 aa14.48□□□□□ -0.09
PRKCH-216ENST00000555542 TMEM126AQ9H061 195 aa14.48□□□□□ -0.09
PRKCH-216ENST00000555542 TRGC2P03986 189 aa14.47□□□□□ -0.09
PRKCH-216ENST00000555542 MEIG1Q5JSS6 88 aa14.47□□□□□ -0.09
PRKCH-216ENST00000555542 TSPAN13O95857 204 aa14.46□□□□□ -0.09
PRKCH-216ENST00000555542 ANAPC11Q9NYG5 84 aa14.46□□□□□ -0.09
PRKCH-216ENST00000555542 Q8NDZ9 215 aa14.45□□□□□ -0.1
PRKCH-216ENST00000555542 LEPROTL1O95214 131 aa14.43□□□□□ -0.1
PRKCH-216ENST00000555542 SMIM13P0DJ93 91 aa14.43□□□□□ -0.1
PRKCH-216ENST00000555542 M0R378 163 aa14.42□□□□□ -0.1
PRKCH-216ENST00000555542 SERF1AO75920 110 aa14.41□□□□□ -0.1
PRKCH-216ENST00000555542 HERV-K104P63124 156 aa14.41□□□□□ -0.1
PRKCH-216ENST00000555542 RNF213Q63HN8 5207 aa14.4□□□□□ -0.1
PRKCH-216ENST00000555542 FAM229BQ4G0N7 80 aa14.39□□□□□ -0.11
PRKCH-216ENST00000555542 BOD1L2Q8IYS8 172 aa14.39□□□□□ -0.11
PRKCH-216ENST00000555542 NDUFA12Q9UI09 145 aa14.39□□□□□ -0.11
PRKCH-216ENST00000555542 LPAP08519 4548 aa14.38□□□□□ -0.11
PRKCH-216ENST00000555542 MYMXA0A1B0GTQ4 84 aa14.38□□□□□ -0.11
PRKCH-216ENST00000555542 LINC00587B1AMM8 73 aa14.38□□□□□ -0.11
PRKCH-216ENST00000555542 SLC7A5P1Q8MH63 180 aa14.38□□□□□ -0.11
PRKCH-216ENST00000555542 MIR7-3HGQ8N6C7 128 aa14.38□□□□□ -0.11
PRKCH-216ENST00000555542 IGKV2D-26A0A0A0MRZ7 120 aa14.37□□□□□ -0.11
PRKCH-216ENST00000555542 HSPB8Q9UJY1 196 aa14.37□□□□□ -0.11
PRKCH-216ENST00000555542 KRTAP13-2Q52LG2 175 aa14.36□□□□□ -0.11
PRKCH-216ENST00000555542 HIGD2AQ9BW72 106 aa14.36□□□□□ -0.11
PRKCH-216ENST00000555542 MAP1LC3CQ9BXW4 147 aa14.36□□□□□ -0.11
PRKCH-216ENST00000555542 NCR3O14931 201 aa14.35□□□□□ -0.11
PRKCH-216ENST00000555542 FABP4P15090 132 aa14.35□□□□□ -0.11
PRKCH-216ENST00000555542 PLNP26678 52 aa14.35□□□□□ -0.11
PRKCH-216ENST00000555542 LINC00310P59036 64 aa14.34□□□□□ -0.11
PRKCH-216ENST00000555542 HERVK_113P61574 105 aa14.32□□□□□ -0.12
PRKCH-216ENST00000555542 PLEKHB2Q96CS7 222 aa14.32□□□□□ -0.12
PRKCH-216ENST00000555542 LEPROTO15243 131 aa14.31□□□□□ -0.12
PRKCH-216ENST00000555542 LINC00304Q8N9R0 145 aa14.31□□□□□ -0.12
PRKCH-216ENST00000555542 PRYO14603 147 aa14.3□□□□□ -0.12
PRKCH-216ENST00000555542 DPM2O94777 84 aa14.3□□□□□ -0.12
PRKCH-216ENST00000555542 PMCHL2Q9BQD1 86 aa14.3□□□□□ -0.12
PRKCH-216ENST00000555542 TSPEAR-AS2P59090 65 aa14.29□□□□□ -0.12
PRKCH-216ENST00000555542 COLCA2A8K830 154 aa14.28□□□□□ -0.12
PRKCH-216ENST00000555542 J3QQQ9 107 aa14.27□□□□□ -0.13
PRKCH-216ENST00000555542 IGKCP01834 107 aa14.27□□□□□ -0.13
PRKCH-216ENST00000555542 LGALS3P17931 250 aaKnown RBP14.27□□□□□ -0.13
PRKCH-216ENST00000555542 S100A12P80511 92 aa14.27□□□□□ -0.13
PRKCH-216ENST00000555542 DAND5Q8N907 189 aa14.26□□□□□ -0.13
PRKCH-216ENST00000555542 ETDCA0A1B0GVM5 59 aa14.25□□□□□ -0.13
PRKCH-216ENST00000555542 ZNF706Q9Y5V0 76 aaPredicted RBP14.25□□□□□ -0.13
PRKCH-216ENST00000555542 MIEN1Q9BRT3 115 aa14.24□□□□□ -0.13
PRKCH-216ENST00000555542 KCNQ1DNQ9H478 68 aa14.24□□□□□ -0.13
PRKCH-216ENST00000555542 TRBV10-3A0A0K0K1G6 114 aa14.23□□□□□ -0.13
PRKCH-216ENST00000555542 NMUP48645 174 aa14.23□□□□□ -0.13
PRKCH-216ENST00000555542 LINC00337Q8N6G1 96 aa14.23□□□□□ -0.13
PRKCH-216ENST00000555542 SPRR4Q96PI1 79 aa14.23□□□□□ -0.13
PRKCH-216ENST00000555542 C3orf22Q8N5N4 141 aa14.22□□□□□ -0.13
PRKCH-216ENST00000555542 RETNLBQ9BQ08 111 aa14.22□□□□□ -0.13
PRKCH-216ENST00000555542 SPRR1AP35321 89 aa14.2□□□□□ -0.14
PRKCH-216ENST00000555542 DDTP30046 118 aa14.17□□□□□ -0.14
PRKCH-216ENST00000555542 SMCR5Q8TEV8 140 aa14.17□□□□□ -0.14
PRKCH-216ENST00000555542 LOC107984156A0A0G2JMH3 177 aa14.16□□□□□ -0.14
PRKCH-216ENST00000555542 ARL17AQ8IVW1 177 aa14.16□□□□□ -0.14
PRKCH-216ENST00000555542 TRBV10-2A0A0K0K1G8 114 aa14.15□□□□□ -0.14
PRKCH-216ENST00000555542 SPANXB1Q9NS25 103 aaPredicted RBP14.15□□□□□ -0.14
PRKCH-216ENST00000555542 KRTAP4-16G5E9R7 235 aaPredicted RBP14.14□□□□□ -0.15
PRKCH-216ENST00000555542 S100A7L2Q5SY68 101 aa14.14□□□□□ -0.15
PRKCH-216ENST00000555542 PPDPFQ9H3Y8 114 aa14.14□□□□□ -0.15
PRKCH-216ENST00000555542 NPC2P61916 151 aa14.13□□□□□ -0.15
PRKCH-216ENST00000555542 HIST1H2BKO60814 126 aa14.12□□□□□ -0.15
PRKCH-216ENST00000555542 HIST1H2BJP06899 126 aa14.12□□□□□ -0.15
PRKCH-216ENST00000555542 HIST1H2BOP23527 126 aa14.12□□□□□ -0.15
PRKCH-216ENST00000555542 HIST1H2BBP33778 126 aa14.12□□□□□ -0.15
PRKCH-216ENST00000555542 HIST1H2BDP58876 126 aa14.12□□□□□ -0.15
PRKCH-216ENST00000555542 HIST1H2BCP62807 126 aa14.12□□□□□ -0.15
PRKCH-216ENST00000555542 CTAG1AP78358 180 aa14.12□□□□□ -0.15
PRKCH-216ENST00000555542 HIST2H2BEQ16778 126 aa14.12□□□□□ -0.15
PRKCH-216ENST00000555542 C4orf48Q5BLP8 95 aa14.12□□□□□ -0.15
PRKCH-216ENST00000555542 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.12□□□□□ -0.15
PRKCH-216ENST00000555542 HIST1H2BHQ93079 126 aa14.12□□□□□ -0.15
PRKCH-216ENST00000555542 HIST1H2BNQ99877 126 aa14.12□□□□□ -0.15
PRKCH-216ENST00000555542 HIST1H2BMQ99879 126 aa14.12□□□□□ -0.15
PRKCH-216ENST00000555542 E9PLD3 99 aa14.11□□□□□ -0.15
PRKCH-216ENST00000555542 SYS1-DBNDD2H3BUS1 97 aa14.11□□□□□ -0.15
PRKCH-216ENST00000555542 SPAG11AQ6PDA7 123 aa14.11□□□□□ -0.15
PRKCH-216ENST00000555542 A0A0J9YXY3 114 aa14.1□□□□□ -0.15
PRKCH-216ENST00000555542 B5MCH6 92 aa14.1□□□□□ -0.15
PRKCH-216ENST00000555542 NDUFC2O95298 119 aa14.09□□□□□ -0.15
PRKCH-216ENST00000555542 GAGE2AQ6NT46 116 aa14.08□□□□□ -0.16
PRKCH-216ENST00000555542 IGLV7-46A0A075B6I9 117 aa14.07□□□□□ -0.16
PRKCH-216ENST00000555542 Q8NBF4 154 aa14.07□□□□□ -0.16
PRKCH-216ENST00000555542 TRAV23DV6A0A075B6W5 121 aa14.05□□□□□ -0.16
PRKCH-216ENST00000555542 ADAMTSL4-AS1Q5T5F5 129 aa14.05□□□□□ -0.16
PRKCH-216ENST00000555542 SOSTDC1Q6X4U4 206 aa14.05□□□□□ -0.16
PRKCH-216ENST00000555542 Q6ZRX8 168 aa14.05□□□□□ -0.16
PRKCH-216ENST00000555542 IGLV6-57P01721 117 aa14.04□□□□□ -0.16
PRKCH-216ENST00000555542 CDIP1Q9H305 208 aa14.04□□□□□ -0.16
PRKCH-216ENST00000555542 ERC2-IT1O76042 136 aa14.03□□□□□ -0.16
PRKCH-216ENST00000555542 LINC00483Q53H64 154 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms