RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 EIF2AK4Q9P2K8 1649 aaKnown RBP1.27□□□□□ -2.21
VRK1-205ENST00000555402 A0A0D9SG42 100 aa1.27□□□□□ -2.21
VRK1-205ENST00000555402 ZFHX3Q15911 3703 aa1.27□□□□□ -2.21
VRK1-205ENST00000555402 COL14A1Q05707 1796 aaKnown RBP1.26□□□□□ -2.21
VRK1-205ENST00000555402 ASXL1Q8IXJ9 1541 aa1.26□□□□□ -2.21
VRK1-205ENST00000555402 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
VRK1-205ENST00000555402 NDUFB1O75438 58 aa1.26□□□□□ -2.21
VRK1-205ENST00000555402 WFDC9Q8NEX5 89 aa1.26□□□□□ -2.21
VRK1-205ENST00000555402 C10orf95Q9H7T3 257 aa1.26□□□□□ -2.21
VRK1-205ENST00000555402 CDC42BPGQ6DT37 1551 aa1.25□□□□□ -2.21
VRK1-205ENST00000555402 CD163L1Q9NR16 1453 aa1.25□□□□□ -2.21
VRK1-205ENST00000555402 TRAV21A0A0B4J279 112 aa1.25□□□□□ -2.21
VRK1-205ENST00000555402 GAFA1Q96PS6 74 aa1.25□□□□□ -2.21
VRK1-205ENST00000555402 TP53AIP1Q9HCN2 124 aa1.25□□□□□ -2.21
VRK1-205ENST00000555402 DOT1LQ8TEK3 1739 aa1.25□□□□□ -2.21
VRK1-205ENST00000555402 A0A0D9SFI3 127 aa1.24□□□□□ -2.21
VRK1-205ENST00000555402 LMTK2Q8IWU2 1503 aa1.24□□□□□ -2.21
VRK1-205ENST00000555402 TIAM1Q13009 1591 aa1.23□□□□□ -2.21
VRK1-205ENST00000555402 H3BVH4 76 aa1.23□□□□□ -2.21
VRK1-205ENST00000555402 FAM103A1Q9BTL3 118 aaKnown RBP1.23□□□□□ -2.21
VRK1-205ENST00000555402 CNFNQ9BYD5 112 aa1.23□□□□□ -2.21
VRK1-205ENST00000555402 RICTORQ6R327 1708 aa1.23□□□□□ -2.21
VRK1-205ENST00000555402 UBR3Q6ZT12 1888 aa1.22□□□□□ -2.21
VRK1-205ENST00000555402 ASXL3Q9C0F0 2248 aa1.22□□□□□ -2.21
VRK1-205ENST00000555402 I3L2K1 104 aa1.22□□□□□ -2.21
VRK1-205ENST00000555402 IFI6P09912 130 aa1.22□□□□□ -2.21
VRK1-205ENST00000555402 PRO0255Q9UI72 69 aa1.22□□□□□ -2.21
VRK1-205ENST00000555402 HILPDAQ9Y5L2 63 aa1.22□□□□□ -2.21
VRK1-205ENST00000555402 HFM1A2PYH4 1435 aa1.22□□□□□ -2.21
VRK1-205ENST00000555402 NHSQ6T4R5 1651 aa1.21□□□□□ -2.22
VRK1-205ENST00000555402 COX7BP24311 80 aa1.21□□□□□ -2.22
VRK1-205ENST00000555402 COX6A2Q02221 97 aa1.21□□□□□ -2.22
VRK1-205ENST00000555402 PIGYQ3MUY2 71 aa1.21□□□□□ -2.22
VRK1-205ENST00000555402 NREPQ16612 68 aa1.2□□□□□ -2.22
VRK1-205ENST00000555402 NRAPQ86VF7 1730 aa1.2□□□□□ -2.22
VRK1-205ENST00000555402 FXYD6-FXYD2A0A087WZ82 144 aa1.19□□□□□ -2.22
VRK1-205ENST00000555402 COX8AP10176 69 aa1.19□□□□□ -2.22
VRK1-205ENST00000555402 ANKRD50Q9ULJ7 1429 aa1.19□□□□□ -2.22
VRK1-205ENST00000555402 PREX1Q8TCU6 1659 aa1.19□□□□□ -2.22
VRK1-205ENST00000555402 TSC2P49815 1807 aa1.18□□□□□ -2.22
VRK1-205ENST00000555402 SPTY2D1-AS1A0A0U1RR47 76 aa1.18□□□□□ -2.22
VRK1-205ENST00000555402 S100ZQ8WXG8 99 aa1.18□□□□□ -2.22
VRK1-205ENST00000555402 BIVM-ERCC5R4GMW8 1640 aa1.18□□□□□ -2.22
VRK1-205ENST00000555402 NAV3Q8IVL0 2385 aa1.18□□□□□ -2.22
VRK1-205ENST00000555402 FMN2Q9NZ56 1722 aa1.18□□□□□ -2.22
VRK1-205ENST00000555402 NWD1Q149M9 1564 aa1.17□□□□□ -2.22
VRK1-205ENST00000555402 THOC2Q8NI27 1593 aaKnown RBP1.17□□□□□ -2.22
VRK1-205ENST00000555402 A0A087WWC5 75 aa1.17□□□□□ -2.22
VRK1-205ENST00000555402 RPL38P63173 70 aaKnown RBP1.17□□□□□ -2.22
VRK1-205ENST00000555402 DEFB123Q8N688 67 aa1.17□□□□□ -2.22
VRK1-205ENST00000555402 GNG13Q9P2W3 67 aa1.17□□□□□ -2.22
VRK1-205ENST00000555402 NESP48681 1621 aa1.16□□□□□ -2.22
VRK1-205ENST00000555402 Q8IZM0 81 aa1.16□□□□□ -2.22
VRK1-205ENST00000555402 DIP2AQ14689 1571 aa1.16□□□□□ -2.22
VRK1-205ENST00000555402 K7EQZ3 153 aa1.15□□□□□ -2.23
VRK1-205ENST00000555402 HMGA1P17096 107 aaKnown RBP1.15□□□□□ -2.23
VRK1-205ENST00000555402 ATXN8Q156A1 80 aa1.15□□□□□ -2.23
VRK1-205ENST00000555402 USMG5Q96IX5 58 aa1.15□□□□□ -2.23
VRK1-205ENST00000555402 RALGAPBQ86X10 1494 aa1.15□□□□□ -2.23
VRK1-205ENST00000555402 JMJD1CQ15652 2540 aa1.15□□□□□ -2.23
VRK1-205ENST00000555402 TNRC6CQ9HCJ0 1690 aaKnown RBP1.14□□□□□ -2.23
VRK1-205ENST00000555402 LCE6AA0A183 80 aa1.14□□□□□ -2.23
VRK1-205ENST00000555402 CRIPTQ9P021 101 aa1.14□□□□□ -2.23
VRK1-205ENST00000555402 ABCA6Q8N139 1617 aa1.14□□□□□ -2.23
VRK1-205ENST00000555402 DDX60LQ5H9U9 1706 aaKnown RBP1.13□□□□□ -2.23
VRK1-205ENST00000555402 CPSF4LA6NMK7 179 aaKnown RBP1.12□□□□□ -2.23
VRK1-205ENST00000555402 I3L3M4 83 aa1.12□□□□□ -2.23
VRK1-205ENST00000555402 NDUFA4O00483 81 aa1.12□□□□□ -2.23
VRK1-205ENST00000555402 FAM208BQ5VWN6 2430 aa1.11□□□□□ -2.23
VRK1-205ENST00000555402 C3orf79P0CE67 100 aa1.11□□□□□ -2.23
VRK1-205ENST00000555402 PREX2Q70Z35 1606 aa1.11□□□□□ -2.23
VRK1-205ENST00000555402 SFTA3P0C7M3 94 aa1.1□□□□□ -2.23
VRK1-205ENST00000555402 PLXNC1O60486 1568 aa1.09□□□□□ -2.23
VRK1-205ENST00000555402 AHCTF1Q8WYP5 2266 aa1.09□□□□□ -2.23
VRK1-205ENST00000555402 COX6B1P14854 86 aa1.09□□□□□ -2.23
VRK1-205ENST00000555402 MRPL34Q9BQ48 92 aaKnown RBP1.09□□□□□ -2.23
VRK1-205ENST00000555402 URB1O60287 2271 aaKnown RBP1.08□□□□□ -2.24
VRK1-205ENST00000555402 GLI2P10070 1586 aa1.08□□□□□ -2.24
VRK1-205ENST00000555402 FBN2P35556 2912 aa1.07□□□□□ -2.24
VRK1-205ENST00000555402 TJP1Q07157 1748 aa1.07□□□□□ -2.24
VRK1-205ENST00000555402 ENHOQ6UWT2 76 aa1.07□□□□□ -2.24
VRK1-205ENST00000555402 ALS2Q96Q42 1657 aa1.07□□□□□ -2.24
VRK1-205ENST00000555402 ABCA10Q8WWZ4 1543 aa1.06□□□□□ -2.24
VRK1-205ENST00000555402 Q5VSD8 79 aa1.06□□□□□ -2.24
VRK1-205ENST00000555402 RNF17Q9BXT8 1623 aaKnown RBP1.06□□□□□ -2.24
VRK1-205ENST00000555402 C3P01024 1663 aa1.06□□□□□ -2.24
VRK1-205ENST00000555402 ABCC6O95255 1503 aa1.05□□□□□ -2.24
VRK1-205ENST00000555402 CCL22O00626 93 aa1.05□□□□□ -2.24
VRK1-205ENST00000555402 SMIM5Q71RC9 77 aa1.05□□□□□ -2.24
VRK1-205ENST00000555402 NOTCH1P46531 2555 aa1.05□□□□□ -2.24
VRK1-205ENST00000555402 EEA1Q15075 1411 aa1.05□□□□□ -2.24
VRK1-205ENST00000555402 PRXQ9BXM0 1461 aa1.05□□□□□ -2.24
VRK1-205ENST00000555402 C4AP0C0L4 1744 aa1.04□□□□□ -2.24
VRK1-205ENST00000555402 C4BP0C0L5 1744 aa1.04□□□□□ -2.24
VRK1-205ENST00000555402 UNC79Q9P2D8 2635 aa1.03□□□□□ -2.24
VRK1-205ENST00000555402 CACNA1AO00555 2505 aa1.03□□□□□ -2.24
VRK1-205ENST00000555402 LINC01549A6NIU2 74 aa1.03□□□□□ -2.24
VRK1-205ENST00000555402 SPRR1AP35321 89 aa1.03□□□□□ -2.24
VRK1-205ENST00000555402 UBL5Q9BZL1 73 aa1.03□□□□□ -2.24
VRK1-205ENST00000555402 MROH2AA6NES4 1674 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms