RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 CHCHD7Q9BUK0 85 aa4.88□□□□□ -1.63
SYNE2-216ENST00000555002 Q8N2B8 174 aa4.88□□□□□ -1.63
SYNE2-216ENST00000555002 TSPEAR-AS2P59090 65 aa4.88□□□□□ -1.63
SYNE2-216ENST00000555002 FLNBO75369 2602 aaKnown RBP4.88□□□□□ -1.63
SYNE2-216ENST00000555002 Q8N6K4 173 aa4.88□□□□□ -1.63
SYNE2-216ENST00000555002 KIAA0087Q14695 138 aa4.87□□□□□ -1.63
SYNE2-216ENST00000555002 FHL3Q13643 280 aa4.87□□□□□ -1.63
SYNE2-216ENST00000555002 Q6ZRU5 148 aa4.87□□□□□ -1.63
SYNE2-216ENST00000555002 C22orf24Q9Y442 160 aa4.87□□□□□ -1.63
SYNE2-216ENST00000555002 POLR2KP53803 58 aaKnown RBP4.87□□□□□ -1.63
SYNE2-216ENST00000555002 NHLRC4P0CG21 123 aaPredicted RBP4.87□□□□□ -1.63
SYNE2-216ENST00000555002 Q6ZSN1 163 aa4.87□□□□□ -1.63
SYNE2-216ENST00000555002 AVPP01185 164 aa4.86□□□□□ -1.63
SYNE2-216ENST00000555002 EIF4EBP1Q13541 118 aaPredicted RBP4.85□□□□□ -1.63
SYNE2-216ENST00000555002 YPEL4Q96NS1 127 aa4.85□□□□□ -1.63
SYNE2-216ENST00000555002 F8WDY8 70 aa4.85□□□□□ -1.63
SYNE2-216ENST00000555002 ZNF580Q9UK33 172 aa4.85□□□□□ -1.63
SYNE2-216ENST00000555002 IGIPA6NJ69 53 aa4.85□□□□□ -1.63
SYNE2-216ENST00000555002 IGLV1-51P01701 117 aa4.85□□□□□ -1.63
SYNE2-216ENST00000555002 LINC00313P59037 77 aa4.85□□□□□ -1.63
SYNE2-216ENST00000555002 RTL8CO15255 209 aa4.85□□□□□ -1.63
SYNE2-216ENST00000555002 CDSNQ15517 529 aa4.84□□□□□ -1.63
SYNE2-216ENST00000555002 ZNF295-AS1Q8N0V1 137 aa4.84□□□□□ -1.63
SYNE2-216ENST00000555002 RPL37AP61513 92 aaKnown RBP4.84□□□□□ -1.63
SYNE2-216ENST00000555002 C8orf87E5RJ46 101 aa4.84□□□□□ -1.63
SYNE2-216ENST00000555002 TP53AIP1Q9HCN2 124 aa4.83□□□□□ -1.64
SYNE2-216ENST00000555002 TRAV22A0A0B4J277 110 aa4.83□□□□□ -1.64
SYNE2-216ENST00000555002 LINC01554Q52M75 96 aa4.83□□□□□ -1.64
SYNE2-216ENST00000555002 Q6ZPA2 131 aa4.83□□□□□ -1.64
SYNE2-216ENST00000555002 STAB1Q9NY15 2570 aa4.83□□□□□ -1.64
SYNE2-216ENST00000555002 CRIPTQ9P021 101 aa4.83□□□□□ -1.64
SYNE2-216ENST00000555002 PHF5AQ7RTV0 110 aaKnown RBP4.82□□□□□ -1.64
SYNE2-216ENST00000555002 C9orf92A6NGG3 77 aa4.82□□□□□ -1.64
SYNE2-216ENST00000555002 EIF4EBP3O60516 100 aaPredicted RBP4.81□□□□□ -1.64
SYNE2-216ENST00000555002 CXCL6P80162 114 aa4.81□□□□□ -1.64
SYNE2-216ENST00000555002 LINC00846Q9NV44 126 aa4.81□□□□□ -1.64
SYNE2-216ENST00000555002 Q6ZRP5 223 aa4.81□□□□□ -1.64
SYNE2-216ENST00000555002 Q8NBF4 154 aa4.81□□□□□ -1.64
SYNE2-216ENST00000555002 EPM2AB3EWF7 344 aa4.81□□□□□ -1.64
SYNE2-216ENST00000555002 SPATA3Q8NHX4 192 aa4.81□□□□□ -1.64
SYNE2-216ENST00000555002 IGLV6-57P01721 117 aa4.8□□□□□ -1.64
SYNE2-216ENST00000555002 LINC00167Q96N53 147 aa4.8□□□□□ -1.64
SYNE2-216ENST00000555002 CFAP46Q8IYW2 2715 aa4.8□□□□□ -1.64
SYNE2-216ENST00000555002 DMBT1Q9UGM3 2413 aaPredicted RBP4.8□□□□□ -1.64
SYNE2-216ENST00000555002 A0A0D9SG42 100 aa4.79□□□□□ -1.64
SYNE2-216ENST00000555002 C16orf95Q9H693 158 aa4.79□□□□□ -1.64
SYNE2-216ENST00000555002 A0A1B0GUV1 79 aa4.79□□□□□ -1.64
SYNE2-216ENST00000555002 LINC00315P59091 139 aa4.79□□□□□ -1.64
SYNE2-216ENST00000555002 LINC01600Q96MT4 127 aa4.79□□□□□ -1.64
SYNE2-216ENST00000555002 C9orf129Q5T035 196 aaKnown RBP4.78□□□□□ -1.64
SYNE2-216ENST00000555002 AMELXQ99217 191 aa4.78□□□□□ -1.64
SYNE2-216ENST00000555002 FAM19A4Q96LR4 140 aa4.78□□□□□ -1.64
SYNE2-216ENST00000555002 AKAP13Q12802 2813 aa4.77□□□□□ -1.65
SYNE2-216ENST00000555002 KIF25-AS1Q9Y6Z4 181 aa4.77□□□□□ -1.65
SYNE2-216ENST00000555002 C4orf26Q17RF5 130 aa4.77□□□□□ -1.65
SYNE2-216ENST00000555002 ST20-AS1Q8NBB2 130 aa4.76□□□□□ -1.65
SYNE2-216ENST00000555002 CDIP1Q9H305 208 aa4.76□□□□□ -1.65
SYNE2-216ENST00000555002 NBDYA0A0U1RRE5 68 aa4.76□□□□□ -1.65
SYNE2-216ENST00000555002 PRRC2CQ9Y520 2896 aaKnown RBP4.76□□□□□ -1.65
SYNE2-216ENST00000555002 LINC00476Q8WZB0 136 aa4.75□□□□□ -1.65
SYNE2-216ENST00000555002 CNFNQ9BYD5 112 aa4.75□□□□□ -1.65
SYNE2-216ENST00000555002 CRIP3Q6Q6R5 217 aa4.75□□□□□ -1.65
SYNE2-216ENST00000555002 OBSCN-AS1Q96MR7 158 aa4.75□□□□□ -1.65
SYNE2-216ENST00000555002 LINC01561Q8N1V8 128 aa4.75□□□□□ -1.65
SYNE2-216ENST00000555002 DSCR10P59022 87 aa4.74□□□□□ -1.65
SYNE2-216ENST00000555002 Q6ZQT0 140 aa4.74□□□□□ -1.65
SYNE2-216ENST00000555002 FAM168BA1KXE4 195 aa4.74□□□□□ -1.65
SYNE2-216ENST00000555002 LINC00304Q8N9R0 145 aa4.74□□□□□ -1.65
SYNE2-216ENST00000555002 PRO0628Q9UI54 55 aa4.73□□□□□ -1.65
SYNE2-216ENST00000555002 IGLV5-37A0A075B6J1 123 aa4.73□□□□□ -1.65
SYNE2-216ENST00000555002 BCE1O60756 84 aa4.73□□□□□ -1.65
SYNE2-216ENST00000555002 Q6ZRX8 168 aa4.73□□□□□ -1.65
SYNE2-216ENST00000555002 C11orf72Q8NBR9 251 aa4.73□□□□□ -1.65
SYNE2-216ENST00000555002 MUC22E2RYF6 1773 aaPredicted RBP4.72□□□□□ -1.65
SYNE2-216ENST00000555002 CENPEQ02224 2701 aa4.72□□□□□ -1.65
SYNE2-216ENST00000555002 K7EQZ3 153 aa4.72□□□□□ -1.65
SYNE2-216ENST00000555002 SMR3BP02814 79 aaPredicted RBP4.72□□□□□ -1.65
SYNE2-216ENST00000555002 ITPR3Q14573 2671 aa4.71□□□□□ -1.66
SYNE2-216ENST00000555002 ZNF575Q86XF7 245 aa4.71□□□□□ -1.66
SYNE2-216ENST00000555002 COA5Q86WW8 74 aa4.71□□□□□ -1.66
SYNE2-216ENST00000555002 IGLV5-48A0A075B6I7 105 aa4.7□□□□□ -1.66
SYNE2-216ENST00000555002 IGLV5-39A0A0G2JS06 123 aa4.7□□□□□ -1.66
SYNE2-216ENST00000555002 BAHCC1Q9P281 2608 aa4.7□□□□□ -1.66
SYNE2-216ENST00000555002 FAM218AQ96MZ4 157 aa4.7□□□□□ -1.66
SYNE2-216ENST00000555002 WWC2-AS2Q96NR7 200 aa4.7□□□□□ -1.66
SYNE2-216ENST00000555002 TM2D3Q9BRN9 247 aa4.69□□□□□ -1.66
SYNE2-216ENST00000555002 LOC101927531A0A1B0GV80 90 aa4.69□□□□□ -1.66
SYNE2-216ENST00000555002 M0R2T5 61 aa4.69□□□□□ -1.66
SYNE2-216ENST00000555002 MIR22HGQ0VDD5 57 aa4.69□□□□□ -1.66
SYNE2-216ENST00000555002 LINC00588Q9Y4M8 146 aa4.69□□□□□ -1.66
SYNE2-216ENST00000555002 RBM12B-AS1Q9P1G2 102 aa4.68□□□□□ -1.66
SYNE2-216ENST00000555002 NBEAL1Q6ZS30 2694 aa4.68□□□□□ -1.66
SYNE2-216ENST00000555002 STAB2Q8WWQ8 2551 aa4.68□□□□□ -1.66
SYNE2-216ENST00000555002 LINC00310P59036 64 aa4.68□□□□□ -1.66
SYNE2-216ENST00000555002 H3BPC8 53 aa4.68□□□□□ -1.66
SYNE2-216ENST00000555002 ELOF1P60002 83 aaKnown RBP4.68□□□□□ -1.66
SYNE2-216ENST00000555002 A8MWP4 228 aa4.68□□□□□ -1.66
SYNE2-216ENST00000555002 LUZP6Q538Z0 58 aa4.68□□□□□ -1.66
SYNE2-216ENST00000555002 URB1-AS1Q96HZ7 61 aa4.67□□□□□ -1.66
SYNE2-216ENST00000555002 A0A1W2PPR1 153 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms