RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 LOC107984156A0A0G2JMH3 177 aa10.39□□□□□ -0.75
SPTLC2-203ENST00000554901 TMEM238C9JI98 176 aa10.39□□□□□ -0.75
SPTLC2-203ENST00000554901 ARL17AQ8IVW1 177 aa10.39□□□□□ -0.75
SPTLC2-203ENST00000554901 LITAFQ99732 161 aa10.38□□□□□ -0.75
SPTLC2-203ENST00000554901 A0A1W2PNN7 141 aa10.38□□□□□ -0.75
SPTLC2-203ENST00000554901 DDTP30046 118 aa10.38□□□□□ -0.75
SPTLC2-203ENST00000554901 Q6ZVH6 145 aa10.38□□□□□ -0.75
SPTLC2-203ENST00000554901 ADAMTSL4-AS1Q5T5F5 129 aa10.37□□□□□ -0.75
SPTLC2-203ENST00000554901 RPL24P83731 157 aaKnown RBP10.36□□□□□ -0.75
SPTLC2-203ENST00000554901 MIEN1Q9BRT3 115 aa10.36□□□□□ -0.75
SPTLC2-203ENST00000554901 SPANXDQ9BXN6 97 aa10.36□□□□□ -0.75
SPTLC2-203ENST00000554901 SPANXCQ9NY87 97 aa10.36□□□□□ -0.75
SPTLC2-203ENST00000554901 APOBP04114 4563 aaKnown RBP10.36□□□□□ -0.75
SPTLC2-203ENST00000554901 IGLV5-37A0A075B6J1 123 aa10.35□□□□□ -0.75
SPTLC2-203ENST00000554901 FAM168BA1KXE4 195 aa10.35□□□□□ -0.75
SPTLC2-203ENST00000554901 SLC25A34Q6PIV7 304 aa10.35□□□□□ -0.75
SPTLC2-203ENST00000554901 DAND5Q8N907 189 aa10.35□□□□□ -0.75
SPTLC2-203ENST00000554901 COPS9Q8WXC6 57 aa10.35□□□□□ -0.75
SPTLC2-203ENST00000554901 C14orf144Q96I85 54 aa10.35□□□□□ -0.75
SPTLC2-203ENST00000554901 PPDPFQ9H3Y8 114 aa10.35□□□□□ -0.75
SPTLC2-203ENST00000554901 TP73-AS1Q9UF72 201 aa10.35□□□□□ -0.75
SPTLC2-203ENST00000554901 BIRC6Q9NR09 4857 aa10.35□□□□□ -0.75
SPTLC2-203ENST00000554901 FAM19A5Q7Z5A7 132 aaPredicted RBP10.34□□□□□ -0.75
SPTLC2-203ENST00000554901 HAMPP81172 84 aa10.33□□□□□ -0.76
SPTLC2-203ENST00000554901 SERTAD4-AS1Q5TG53 156 aa10.33□□□□□ -0.76
SPTLC2-203ENST00000554901 KRTAP7-1Q8IUC3 87 aa10.33□□□□□ -0.76
SPTLC2-203ENST00000554901 SPANXB1Q9NS25 103 aaPredicted RBP10.33□□□□□ -0.76
SPTLC2-203ENST00000554901 M0QXV9 152 aa10.33□□□□□ -0.76
SPTLC2-203ENST00000554901 VPREB1P12018 145 aa10.33□□□□□ -0.76
SPTLC2-203ENST00000554901 IFITM1P13164 125 aa10.33□□□□□ -0.76
SPTLC2-203ENST00000554901 NKAPP1Q8N9T2 125 aa10.32□□□□□ -0.76
SPTLC2-203ENST00000554901 LINC00308Q8TCZ7 52 aa10.32□□□□□ -0.76
SPTLC2-203ENST00000554901 C22orf24Q9Y442 160 aa10.32□□□□□ -0.76
SPTLC2-203ENST00000554901 NDUFC2O95298 119 aa10.31□□□□□ -0.76
SPTLC2-203ENST00000554901 C7orf33Q8WU49 177 aa10.31□□□□□ -0.76
SPTLC2-203ENST00000554901 HIGD1BQ9P298 99 aa10.31□□□□□ -0.76
SPTLC2-203ENST00000554901 SRSF9Q13242 221 aaKnown RBP eCLIP10.29□□□□□ -0.76
SPTLC2-203ENST00000554901 SOSTDC1Q6X4U4 206 aa10.29□□□□□ -0.76
SPTLC2-203ENST00000554901 MRPL55Q7Z7F7 128 aaKnown RBP10.29□□□□□ -0.76
SPTLC2-203ENST00000554901 KIAA1109Q2LD37 5005 aa10.29□□□□□ -0.76
SPTLC2-203ENST00000554901 PRO1933Q9H354 126 aa10.28□□□□□ -0.76
SPTLC2-203ENST00000554901 PHF5AQ7RTV0 110 aaKnown RBP10.28□□□□□ -0.76
SPTLC2-203ENST00000554901 Q8NDZ9 215 aa10.28□□□□□ -0.76
SPTLC2-203ENST00000554901 RYR1P21817 5038 aa10.27□□□□□ -0.77
SPTLC2-203ENST00000554901 TRBV10-2A0A0K0K1G8 114 aa10.27□□□□□ -0.77
SPTLC2-203ENST00000554901 M0R378 163 aa10.27□□□□□ -0.77
SPTLC2-203ENST00000554901 EIF4EBP3O60516 100 aaPredicted RBP10.27□□□□□ -0.77
SPTLC2-203ENST00000554901 NPC2P61916 151 aa10.27□□□□□ -0.77
SPTLC2-203ENST00000554901 UQCR10Q9UDW1 63 aa10.27□□□□□ -0.77
SPTLC2-203ENST00000554901 LINC00528Q8N1L1 170 aa10.26□□□□□ -0.77
SPTLC2-203ENST00000554901 FAM229AH3BQW9 127 aa10.25□□□□□ -0.77
SPTLC2-203ENST00000554901 SMR3BP02814 79 aaPredicted RBP10.25□□□□□ -0.77
SPTLC2-203ENST00000554901 C2orf91Q6ZV80 131 aa10.25□□□□□ -0.77
SPTLC2-203ENST00000554901 MUSTN1Q8IVN3 82 aa10.25□□□□□ -0.77
SPTLC2-203ENST00000554901 Q8N1X5 172 aa10.24□□□□□ -0.77
SPTLC2-203ENST00000554901 LINC00167Q96N53 147 aa10.24□□□□□ -0.77
SPTLC2-203ENST00000554901 HIST1H4GQ99525 98 aa10.24□□□□□ -0.77
SPTLC2-203ENST00000554901 HSPG2P98160 4391 aa10.24□□□□□ -0.77
SPTLC2-203ENST00000554901 UBE2BP63146 152 aa10.23□□□□□ -0.77
SPTLC2-203ENST00000554901 TAL2Q16559 108 aa10.23□□□□□ -0.77
SPTLC2-203ENST00000554901 M0R143 59 aa10.22□□□□□ -0.77
SPTLC2-203ENST00000554901 NCR3O14931 201 aa10.22□□□□□ -0.77
SPTLC2-203ENST00000554901 PRR3P79522 188 aaKnown RBP10.22□□□□□ -0.77
SPTLC2-203ENST00000554901 IGLV1-50A0A075B6I6 118 aa10.21□□□□□ -0.78
SPTLC2-203ENST00000554901 A0A1B0GV90 55 aa10.21□□□□□ -0.78
SPTLC2-203ENST00000554901 PLA2G1BP04054 148 aaKnown RBP10.21□□□□□ -0.78
SPTLC2-203ENST00000554901 GAGE10A6NGK3 116 aa10.2□□□□□ -0.78
SPTLC2-203ENST00000554901 RPL37AP61513 92 aaKnown RBP10.2□□□□□ -0.78
SPTLC2-203ENST00000554901 PSORS1C2Q9UIG4 136 aa10.19□□□□□ -0.78
SPTLC2-203ENST00000554901 CBY1Q9Y3M2 126 aa10.19□□□□□ -0.78
SPTLC2-203ENST00000554901 IGKV2-28A0A075B6P5 120 aa10.18□□□□□ -0.78
SPTLC2-203ENST00000554901 RPL37AP8A6NKH3 93 aa10.18□□□□□ -0.78
SPTLC2-203ENST00000554901 IGKV2D-28P01615 120 aa10.18□□□□□ -0.78
SPTLC2-203ENST00000554901 Q5VSD8 79 aa10.18□□□□□ -0.78
SPTLC2-203ENST00000554901 IGLV6-57P01721 117 aa10.17□□□□□ -0.78
SPTLC2-203ENST00000554901 S100A7L2Q5SY68 101 aa10.17□□□□□ -0.78
SPTLC2-203ENST00000554901 KRTAP11-1Q8IUC1 163 aa10.17□□□□□ -0.78
SPTLC2-203ENST00000554901 A4D1N5 150 aa10.17□□□□□ -0.78
SPTLC2-203ENST00000554901 HNRNPA3P51991 378 aaKnown RBP10.17□□□□□ -0.78
SPTLC2-203ENST00000554901 HSD52Q0P140 79 aa10.17□□□□□ -0.78
SPTLC2-203ENST00000554901 TMEM126AQ9H061 195 aa10.17□□□□□ -0.78
SPTLC2-203ENST00000554901 KCNQ1DNQ9H478 68 aa10.17□□□□□ -0.78
SPTLC2-203ENST00000554901 FAT1Q14517 4588 aa10.16□□□□□ -0.78
SPTLC2-203ENST00000554901 TRBV10-3A0A0K0K1G6 114 aa10.16□□□□□ -0.78
SPTLC2-203ENST00000554901 CEND1Q8N111 149 aa10.16□□□□□ -0.78
SPTLC2-203ENST00000554901 TRAV13-2A0A0B4J235 113 aa10.15□□□□□ -0.78
SPTLC2-203ENST00000554901 PRYO14603 147 aa10.15□□□□□ -0.78
SPTLC2-203ENST00000554901 TMEM238LA0A1B0GVL6 79 aa10.14□□□□□ -0.79
SPTLC2-203ENST00000554901 A6NJY4 79 aa10.14□□□□□ -0.79
SPTLC2-203ENST00000554901 KRTAP10-4P60372 401 aaPredicted RBP10.14□□□□□ -0.79
SPTLC2-203ENST00000554901 C1orf137Q5JT78 98 aa10.14□□□□□ -0.79
SPTLC2-203ENST00000554901 LINC00337Q8N6G1 96 aa10.14□□□□□ -0.79
SPTLC2-203ENST00000554901 REG3GQ6UW15 175 aa10.13□□□□□ -0.79
SPTLC2-203ENST00000554901 OR13C6PQ8NH95 151 aa10.13□□□□□ -0.79
SPTLC2-203ENST00000554901 BCE1O60756 84 aa10.12□□□□□ -0.79
SPTLC2-203ENST00000554901 KRTAP17-1Q9BYP8 105 aa10.12□□□□□ -0.79
SPTLC2-203ENST00000554901 HERC2O95714 4834 aa10.12□□□□□ -0.79
SPTLC2-203ENST00000554901 SPRR1AP35321 89 aa10.12□□□□□ -0.79
SPTLC2-203ENST00000554901 SNHG12Q9BXW3 62 aa10.12□□□□□ -0.79
SPTLC2-203ENST00000554901 A6NDN8 102 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms