RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 MRPL55Q7Z7F7 128 aaKnown RBP11.67□□□□□ -0.54
PCNX1-209ENST00000554879 RMI2Q96E14 147 aa11.67□□□□□ -0.54
PCNX1-209ENST00000554879 CELA1Q9UNI1 258 aa11.67□□□□□ -0.54
PCNX1-209ENST00000554879 LINC00269Q8N2A0 174 aa11.66□□□□□ -0.54
PCNX1-209ENST00000554879 LINC01546A6NGU7 62 aa11.66□□□□□ -0.54
PCNX1-209ENST00000554879 LINC01561Q8N1V8 128 aa11.65□□□□□ -0.54
PCNX1-209ENST00000554879 CSNK1G2-AS1Q8NCQ2 148 aa11.65□□□□□ -0.54
PCNX1-209ENST00000554879 SPTSSBQ8NFR3 76 aa11.65□□□□□ -0.54
PCNX1-209ENST00000554879 A0A0J9YWU9 116 aa11.65□□□□□ -0.55
PCNX1-209ENST00000554879 LINC00474Q9P2X8 69 aa11.64□□□□□ -0.55
PCNX1-209ENST00000554879 DEFB131BA0A096LNP1 70 aa11.64□□□□□ -0.55
PCNX1-209ENST00000554879 NANOS2P60321 138 aaKnown RBP11.64□□□□□ -0.55
PCNX1-209ENST00000554879 EIF4EBP3O60516 100 aaPredicted RBP11.63□□□□□ -0.55
PCNX1-209ENST00000554879 Q6JHZ5 121 aa11.63□□□□□ -0.55
PCNX1-209ENST00000554879 NTM-AS1Q6ZSK4 140 aa11.63□□□□□ -0.55
PCNX1-209ENST00000554879 UBE2DNLQ8IWF7 75 aa11.63□□□□□ -0.55
PCNX1-209ENST00000554879 IGLV4-60A0A075B6I1 120 aa11.62□□□□□ -0.55
PCNX1-209ENST00000554879 MIR7-3HGQ8N6C7 128 aa11.62□□□□□ -0.55
PCNX1-209ENST00000554879 CDC42SE2Q9NRR3 84 aa11.61□□□□□ -0.55
PCNX1-209ENST00000554879 Q6ZTC4 211 aa11.61□□□□□ -0.55
PCNX1-209ENST00000554879 TENM1Q9UKZ4 2725 aa11.6□□□□□ -0.55
PCNX1-209ENST00000554879 OXTP01178 125 aa11.6□□□□□ -0.55
PCNX1-209ENST00000554879 KPRPQ5T749 579 aaPredicted RBP11.59□□□□□ -0.55
PCNX1-209ENST00000554879 TRBV7-6A0A0J9YX20 115 aa11.59□□□□□ -0.55
PCNX1-209ENST00000554879 IGKV2D-24A0A075B6R9 120 aa11.59□□□□□ -0.55
PCNX1-209ENST00000554879 COX6A2Q02221 97 aa11.59□□□□□ -0.55
PCNX1-209ENST00000554879 LINC00242Q5T6M2 205 aa11.59□□□□□ -0.55
PCNX1-209ENST00000554879 COX7B2Q8TF08 81 aa11.59□□□□□ -0.55
PCNX1-209ENST00000554879 ZFHX3Q15911 3703 aa11.58□□□□□ -0.55
PCNX1-209ENST00000554879 MRPS36P82909 103 aaKnown RBP11.58□□□□□ -0.56
PCNX1-209ENST00000554879 Q5XG85 94 aa11.58□□□□□ -0.56
PCNX1-209ENST00000554879 PLAC8L1A1L4L8 177 aa11.58□□□□□ -0.56
PCNX1-209ENST00000554879 CYSRT1A8MQ03 144 aa11.58□□□□□ -0.56
PCNX1-209ENST00000554879 REG3AQ06141 175 aa11.58□□□□□ -0.56
PCNX1-209ENST00000554879 PMAIP1Q13794 54 aa11.58□□□□□ -0.56
PCNX1-209ENST00000554879 KRTAP10-11P60412 298 aa11.57□□□□□ -0.56
PCNX1-209ENST00000554879 AMELXQ99217 191 aa11.57□□□□□ -0.56
PCNX1-209ENST00000554879 A0A087WZ39 114 aa11.57□□□□□ -0.56
PCNX1-209ENST00000554879 H0YGX0 51 aa11.57□□□□□ -0.56
PCNX1-209ENST00000554879 RPL28P46779 137 aaKnown RBP11.57□□□□□ -0.56
PCNX1-209ENST00000554879 ZNF561-AS1K7EIQ3 104 aa11.56□□□□□ -0.56
PCNX1-209ENST00000554879 A0A087WYN8 130 aa11.55□□□□□ -0.56
PCNX1-209ENST00000554879 PRR4Q16378 134 aa11.55□□□□□ -0.56
PCNX1-209ENST00000554879 FAM218AQ96MZ4 157 aa11.55□□□□□ -0.56
PCNX1-209ENST00000554879 CHCHD10Q8WYQ3 142 aaPredicted RBP11.54□□□□□ -0.56
PCNX1-209ENST00000554879 PSPHP1O15172 72 aa11.54□□□□□ -0.56
PCNX1-209ENST00000554879 Q8NAQ8 132 aa11.53□□□□□ -0.56
PCNX1-209ENST00000554879 LINC00959A0A1B0GUT2 108 aa11.53□□□□□ -0.56
PCNX1-209ENST00000554879 CCL18P55774 89 aa11.52□□□□□ -0.56
PCNX1-209ENST00000554879 VWFP04275 2813 aa11.52□□□□□ -0.56
PCNX1-209ENST00000554879 FUSP35637 526 aaKnown RBP eCLIP11.52□□□□□ -0.57
PCNX1-209ENST00000554879 SMIM11BQ8TCY0 68 aa11.51□□□□□ -0.57
PCNX1-209ENST00000554879 JMJD7-PLA2G4BH0Y9G9 81 aa11.49□□□□□ -0.57
PCNX1-209ENST00000554879 PSCAO43653 123 aa11.49□□□□□ -0.57
PCNX1-209ENST00000554879 LELP1Q5T871 98 aa11.49□□□□□ -0.57
PCNX1-209ENST00000554879 Q8N3U1 123 aa11.49□□□□□ -0.57
PCNX1-209ENST00000554879 ZNF469Q96JG9 3925 aaPredicted RBP11.49□□□□□ -0.57
PCNX1-209ENST00000554879 NDUFA1O15239 70 aa11.49□□□□□ -0.57
PCNX1-209ENST00000554879 TRAV7A0A075B6U4 112 aa11.48□□□□□ -0.57
PCNX1-209ENST00000554879 SPAG11BQ08648 103 aa11.48□□□□□ -0.57
PCNX1-209ENST00000554879 CCKP06307 115 aa11.48□□□□□ -0.57
PCNX1-209ENST00000554879 HIGD2BQ4VC39 106 aa11.48□□□□□ -0.57
PCNX1-209ENST00000554879 SMIM1B2RUZ4 78 aa11.47□□□□□ -0.57
PCNX1-209ENST00000554879 TRAV10A0A0B4J240 114 aa11.44□□□□□ -0.58
PCNX1-209ENST00000554879 CAMK2N2Q96S95 79 aa11.44□□□□□ -0.58
PCNX1-209ENST00000554879 WFDC10BQ8IUB3 73 aa11.43□□□□□ -0.58
PCNX1-209ENST00000554879 ATP5EP2Q5VTU8 51 aa11.43□□□□□ -0.58
PCNX1-209ENST00000554879 TMEM256-PLSCR3K7ERE1 68 aa11.42□□□□□ -0.58
PCNX1-209ENST00000554879 LYPD5Q6UWN5 251 aa11.42□□□□□ -0.58
PCNX1-209ENST00000554879 LITAFQ99732 161 aa11.42□□□□□ -0.58
PCNX1-209ENST00000554879 CD164L2Q6UWJ8 174 aa11.42□□□□□ -0.58
PCNX1-209ENST00000554879 C9orf129Q5T035 196 aaKnown RBP11.41□□□□□ -0.58
PCNX1-209ENST00000554879 MDFIQ99750 246 aa11.41□□□□□ -0.58
PCNX1-209ENST00000554879 A0A1B0GUV1 79 aa11.37□□□□□ -0.59
PCNX1-209ENST00000554879 NDUFC1O43677 76 aa11.37□□□□□ -0.59
PCNX1-209ENST00000554879 LINC00337Q8N6G1 96 aa11.37□□□□□ -0.59
PCNX1-209ENST00000554879 K7EIL1 84 aa11.37□□□□□ -0.59
PCNX1-209ENST00000554879 C9orf116Q5BN46 136 aaPredicted RBP11.36□□□□□ -0.59
PCNX1-209ENST00000554879 H7BZZ5 65 aa11.36□□□□□ -0.59
PCNX1-209ENST00000554879 NREPQ16612 68 aa11.36□□□□□ -0.59
PCNX1-209ENST00000554879 IGHV3OR16-9A0A0B4J2B5 98 aa11.35□□□□□ -0.59
PCNX1-209ENST00000554879 PRR3P79522 188 aaKnown RBP11.35□□□□□ -0.59
PCNX1-209ENST00000554879 LINC00612Q8N6U2 182 aa11.35□□□□□ -0.59
PCNX1-209ENST00000554879 ESRGQ1W209 222 aa11.34□□□□□ -0.59
PCNX1-209ENST00000554879 XAGE1AQ9HD64 81 aa11.34□□□□□ -0.59
PCNX1-209ENST00000554879 EGFEM1PQ0D2K5 195 aa11.34□□□□□ -0.59
PCNX1-209ENST00000554879 TMEM254Q8TBM7 123 aa11.33□□□□□ -0.6
PCNX1-209ENST00000554879 FBN1P35555 2871 aaKnown RBP11.32□□□□□ -0.6
PCNX1-209ENST00000554879 UNQ6190/PRO20217Q6UXQ8 127 aa11.32□□□□□ -0.6
PCNX1-209ENST00000554879 IBA57-AS1B1ANH7 110 aa11.32□□□□□ -0.6
PCNX1-209ENST00000554879 TM2D3Q9BRN9 247 aa11.32□□□□□ -0.6
PCNX1-209ENST00000554879 C6orf223Q8N319 242 aa11.32□□□□□ -0.6
PCNX1-209ENST00000554879 Q8N9L7 120 aa11.32□□□□□ -0.6
PCNX1-209ENST00000554879 CHKB-CPT1BH3BT56 60 aa11.31□□□□□ -0.6
PCNX1-209ENST00000554879 ATP5EP56381 51 aaPredicted RBP11.31□□□□□ -0.6
PCNX1-209ENST00000554879 C6orf99Q4VX62 202 aa11.31□□□□□ -0.6
PCNX1-209ENST00000554879 BPY2O14599 106 aa11.31□□□□□ -0.6
PCNX1-209ENST00000554879 IGLV5-39A0A0G2JS06 123 aa11.31□□□□□ -0.6
PCNX1-209ENST00000554879 FP248Q71RG6 208 aaPredicted RBP11.3□□□□□ -0.6
PCNX1-209ENST00000554879 IGLV5-45A0A087WSX0 123 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms