RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 PDE6DO43924 150 aa1.68□□□□□ -2.14
SLIRP-202ENST00000553981 IGKV2D-28P01615 120 aa1.68□□□□□ -2.14
SLIRP-202ENST00000553981 SRP19P09132 144 aaKnown RBP1.68□□□□□ -2.14
SLIRP-202ENST00000553981 FCER1GP30273 86 aa1.68□□□□□ -2.14
SLIRP-202ENST00000553981 RPL28P46779 137 aaKnown RBP1.68□□□□□ -2.14
SLIRP-202ENST00000553981 RPL23P62829 140 aaKnown RBP1.68□□□□□ -2.14
SLIRP-202ENST00000553981 HBBP68871 147 aa1.68□□□□□ -2.14
SLIRP-202ENST00000553981 FAM74A3Q4VXF1 159 aa1.68□□□□□ -2.14
SLIRP-202ENST00000553981 PCOTHQ58A44 107 aa1.68□□□□□ -2.14
SLIRP-202ENST00000553981 TEX261Q6UWH6 196 aa1.68□□□□□ -2.14
SLIRP-202ENST00000553981 C2orf66Q6UXQ4 117 aa1.68□□□□□ -2.14
SLIRP-202ENST00000553981 FAM210AQ96ND0 272 aa1.68□□□□□ -2.14
SLIRP-202ENST00000553981 SMIM2Q9BVW6 85 aa1.68□□□□□ -2.14
SLIRP-202ENST00000553981 EIF5A2Q9GZV4 153 aaKnown RBP1.68□□□□□ -2.14
SLIRP-202ENST00000553981 OSTCQ9NRP0 149 aa1.68□□□□□ -2.14
SLIRP-202ENST00000553981 SPANXA1Q9NS26 97 aa1.68□□□□□ -2.14
SLIRP-202ENST00000553981 TOMM7Q9P0U1 55 aa1.68□□□□□ -2.14
SLIRP-202ENST00000553981 TP73-AS1Q9UF72 201 aa1.68□□□□□ -2.14
SLIRP-202ENST00000553981 KANTRA0A1W2PQU2 76 aa1.67□□□□□ -2.14
SLIRP-202ENST00000553981 SMIM27A0A1W2PRY6 76 aa1.67□□□□□ -2.14
SLIRP-202ENST00000553981 TEX46H3BTG2 121 aa1.67□□□□□ -2.14
SLIRP-202ENST00000553981 ERC2-IT1O76042 136 aa1.67□□□□□ -2.14
SLIRP-202ENST00000553981 ADCYAP1P18509 176 aa1.67□□□□□ -2.14
SLIRP-202ENST00000553981 RAB5BP61020 215 aa1.67□□□□□ -2.14
SLIRP-202ENST00000553981 MRPL54Q6P161 138 aaKnown RBP1.67□□□□□ -2.14
SLIRP-202ENST00000553981 FAM19A1Q7Z5A9 133 aa1.67□□□□□ -2.14
SLIRP-202ENST00000553981 Q8IZM0 81 aa1.67□□□□□ -2.14
SLIRP-202ENST00000553981 LINC01561Q8N1V8 128 aa1.67□□□□□ -2.14
SLIRP-202ENST00000553981 SPRR4Q96PI1 79 aa1.67□□□□□ -2.14
SLIRP-202ENST00000553981 C20orf78Q9BR46 151 aa1.67□□□□□ -2.14
SLIRP-202ENST00000553981 TMEM126AQ9H061 195 aa1.67□□□□□ -2.14
SLIRP-202ENST00000553981 IGKV2D-26A0A0A0MRZ7 120 aa1.66□□□□□ -2.14
SLIRP-202ENST00000553981 TGIF2-C20orf24A0A0A6YYL0 155 aa1.66□□□□□ -2.14
SLIRP-202ENST00000553981 LOC389332A0A1B0GUA5 103 aa1.66□□□□□ -2.14
SLIRP-202ENST00000553981 TMEM250H0YL14 139 aa1.66□□□□□ -2.14
SLIRP-202ENST00000553981 CKS2P33552 79 aa1.66□□□□□ -2.14
SLIRP-202ENST00000553981 UBE2AP49459 152 aa1.66□□□□□ -2.14
SLIRP-202ENST00000553981 CEBPGP53567 150 aa1.66□□□□□ -2.14
SLIRP-202ENST00000553981 ALKAL2Q6UX46 152 aa1.66□□□□□ -2.14
SLIRP-202ENST00000553981 Q6ZN92 141 aa1.66□□□□□ -2.14
SLIRP-202ENST00000553981 FP248Q71RG6 208 aaPredicted RBP1.66□□□□□ -2.14
SLIRP-202ENST00000553981 SMIM15Q7Z3B0 74 aa1.66□□□□□ -2.14
SLIRP-202ENST00000553981 SMCR5Q8TEV8 140 aa1.66□□□□□ -2.14
SLIRP-202ENST00000553981 TMEM141Q96I45 108 aa1.66□□□□□ -2.14
SLIRP-202ENST00000553981 KIR2DL4Q99706 377 aa1.66□□□□□ -2.14
SLIRP-202ENST00000553981 ALKBH7Q9BT30 221 aaPredicted RBP1.66□□□□□ -2.14
SLIRP-202ENST00000553981 BIN3Q9NQY0 253 aa1.66□□□□□ -2.14
SLIRP-202ENST00000553981 IGLV8-61A0A075B6I0 122 aa1.65□□□□□ -2.15
SLIRP-202ENST00000553981 LINC00862A6NCI5 91 aa1.65□□□□□ -2.15
SLIRP-202ENST00000553981 F8VRH5 84 aa1.65□□□□□ -2.15
SLIRP-202ENST00000553981 PPP1R2P9O14990 202 aa1.65□□□□□ -2.15
SLIRP-202ENST00000553981 SPINK8P0C7L1 97 aa1.65□□□□□ -2.15
SLIRP-202ENST00000553981 SPRR1AP35321 89 aa1.65□□□□□ -2.15
SLIRP-202ENST00000553981 IFI27P40305 119 aaPredicted RBP1.65□□□□□ -2.15
SLIRP-202ENST00000553981 C6orf226Q5I0X4 101 aa1.65□□□□□ -2.15
SLIRP-202ENST00000553981 SMIM7Q9BQ49 75 aa1.65□□□□□ -2.15
SLIRP-202ENST00000553981 HIGD2AQ9BW72 106 aa1.65□□□□□ -2.15
SLIRP-202ENST00000553981 CHTOPQ9Y3Y2 248 aaKnown RBP1.65□□□□□ -2.15
SLIRP-202ENST00000553981 C9orf92A6NGG3 77 aa1.64□□□□□ -2.15
SLIRP-202ENST00000553981 CKS1BP61024 79 aa1.64□□□□□ -2.15
SLIRP-202ENST00000553981 CTAG1AP78358 180 aa1.64□□□□□ -2.15
SLIRP-202ENST00000553981 LINC00483Q53H64 154 aa1.64□□□□□ -2.15
SLIRP-202ENST00000553981 TEX43Q6ZNM6 134 aa1.64□□□□□ -2.15
SLIRP-202ENST00000553981 TMEM136Q6ZRR5 245 aa1.64□□□□□ -2.15
SLIRP-202ENST00000553981 SLC51BQ86UW2 128 aa1.64□□□□□ -2.15
SLIRP-202ENST00000553981 CBLN2Q8IUK8 224 aa1.64□□□□□ -2.15
SLIRP-202ENST00000553981 LINC00337Q8N6G1 96 aa1.64□□□□□ -2.15
SLIRP-202ENST00000553981 COX7B2Q8TF08 81 aa1.64□□□□□ -2.15
SLIRP-202ENST00000553981 PRELID3AQ96N28 172 aa1.64□□□□□ -2.15
SLIRP-202ENST00000553981 Q9BRP9 147 aa1.64□□□□□ -2.15
SLIRP-202ENST00000553981 SND1-IT1Q9HBX3 110 aa1.64□□□□□ -2.15
SLIRP-202ENST00000553981 NAT8BQ9UHF3 227 aa1.64□□□□□ -2.15
SLIRP-202ENST00000553981 A0A096LNJ9 63 aa1.63□□□□□ -2.15
SLIRP-202ENST00000553981 A0A0G2JQZ4 141 aa1.63□□□□□ -2.15
SLIRP-202ENST00000553981 A4D1N5 150 aa1.63□□□□□ -2.15
SLIRP-202ENST00000553981 MT2AP02795 61 aa1.63□□□□□ -2.15
SLIRP-202ENST00000553981 MT1FP04733 61 aa1.63□□□□□ -2.15
SLIRP-202ENST00000553981 PFN2P35080 140 aa1.63□□□□□ -2.15
SLIRP-202ENST00000553981 MOBPQ13875 183 aa1.63□□□□□ -2.15
SLIRP-202ENST00000553981 ADIRFQ15847 76 aa1.63□□□□□ -2.15
SLIRP-202ENST00000553981 RGS21Q2M5E4 152 aa1.63□□□□□ -2.15
SLIRP-202ENST00000553981 PDZD11Q5EBL8 140 aa1.63□□□□□ -2.15
SLIRP-202ENST00000553981 SPAG11AQ6PDA7 123 aa1.63□□□□□ -2.15
SLIRP-202ENST00000553981 TCTE3Q8IZS6 198 aa1.63□□□□□ -2.15
SLIRP-202ENST00000553981 ORMDL3Q8N138 153 aa1.63□□□□□ -2.15
SLIRP-202ENST00000553981 Q8N8P6 123 aa1.63□□□□□ -2.15
SLIRP-202ENST00000553981 BORCS7Q96B45 105 aa1.63□□□□□ -2.15
SLIRP-202ENST00000553981 TOMM6Q96B49 74 aa1.63□□□□□ -2.15
SLIRP-202ENST00000553981 ZNF625Q96I27 306 aaPredicted RBP1.63□□□□□ -2.15
SLIRP-202ENST00000553981 A0A0U1RRA0 63 aa1.62□□□□□ -2.15
SLIRP-202ENST00000553981 TINCRA0A1B0GVN0 87 aa1.62□□□□□ -2.15
SLIRP-202ENST00000553981 LINC01546A6NGU7 62 aa1.62□□□□□ -2.15
SLIRP-202ENST00000553981 PPP1R17O96001 155 aa1.62□□□□□ -2.15
SLIRP-202ENST00000553981 SPINK1P00995 79 aa1.62□□□□□ -2.15
SLIRP-202ENST00000553981 ZNF22P17026 224 aaPredicted RBP1.62□□□□□ -2.15
SLIRP-202ENST00000553981 RAB5AP20339 215 aa1.62□□□□□ -2.15
SLIRP-202ENST00000553981 NDUFV3P56181 108 aaKnown RBP1.62□□□□□ -2.15
SLIRP-202ENST00000553981 RAB14P61106 215 aa1.62□□□□□ -2.15
SLIRP-202ENST00000553981 HERVK_113P63121 156 aa1.62□□□□□ -2.15
SLIRP-202ENST00000553981 Q6ZVQ6 151 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms