RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 CRIP1P50238 77 aa2.4□□□□□ -2.03
PCNX1-205ENST00000553508 HERVK_113P63121 156 aa2.4□□□□□ -2.03
PCNX1-205ENST00000553508 CIRBPQ14011 172 aaKnown RBP2.4□□□□□ -2.03
PCNX1-205ENST00000553508 AMMECR1LQ6DCA0 310 aa2.4□□□□□ -2.03
PCNX1-205ENST00000553508 RASL11AQ6T310 242 aa2.4□□□□□ -2.03
PCNX1-205ENST00000553508 CLPSL2Q6UWE3 100 aa2.4□□□□□ -2.03
PCNX1-205ENST00000553508 SDIM1Q6ZPB5 146 aa2.4□□□□□ -2.03
PCNX1-205ENST00000553508 BAGE2Q86Y30 109 aa2.4□□□□□ -2.03
PCNX1-205ENST00000553508 SFT2D1Q8WV19 159 aa2.4□□□□□ -2.03
PCNX1-205ENST00000553508 BTF3L4Q96K17 158 aa2.4□□□□□ -2.03
PCNX1-205ENST00000553508 BIN3Q9NQY0 253 aa2.4□□□□□ -2.03
PCNX1-205ENST00000553508 IGLV10-54A0A075B6I4 117 aa2.39□□□□□ -2.03
PCNX1-205ENST00000553508 ARPC5O15511 151 aa2.39□□□□□ -2.03
PCNX1-205ENST00000553508 TEX261Q6UWH6 196 aa2.39□□□□□ -2.03
PCNX1-205ENST00000553508 SMIM15Q7Z3B0 74 aa2.39□□□□□ -2.03
PCNX1-205ENST00000553508 FAM213BQ8TBF2 198 aa2.39□□□□□ -2.03
PCNX1-205ENST00000553508 SPACA4Q8TDM5 124 aa2.39□□□□□ -2.03
PCNX1-205ENST00000553508 MANBALQ9NQG1 85 aa2.39□□□□□ -2.03
PCNX1-205ENST00000553508 PLAC8Q9NZF1 115 aa2.39□□□□□ -2.03
PCNX1-205ENST00000553508 UBR4Q5T4S7 5183 aa2.38□□□□□ -2.03
PCNX1-205ENST00000553508 MUC21A0A0G2JKD1 596 aa2.38□□□□□ -2.03
PCNX1-205ENST00000553508 MUC21A0A140T8X8 626 aa2.38□□□□□ -2.03
PCNX1-205ENST00000553508 KANTRA0A1W2PQU2 76 aa2.38□□□□□ -2.03
PCNX1-205ENST00000553508 M0QY20 66 aa2.38□□□□□ -2.03
PCNX1-205ENST00000553508 NCR2O95944 276 aa2.38□□□□□ -2.03
PCNX1-205ENST00000553508 IFNA1P01562 189 aa2.38□□□□□ -2.03
PCNX1-205ENST00000553508 RPL35P42766 123 aaKnown RBP2.38□□□□□ -2.03
PCNX1-205ENST00000553508 GNG4P50150 75 aa2.38□□□□□ -2.03
PCNX1-205ENST00000553508 PMAIP1Q13794 54 aa2.38□□□□□ -2.03
PCNX1-205ENST00000553508 EIF5AL1Q6IS14 154 aaKnown RBP2.38□□□□□ -2.03
PCNX1-205ENST00000553508 AKAP14Q86UN6 197 aa2.38□□□□□ -2.03
PCNX1-205ENST00000553508 KCNRGQ8N5I3 272 aa2.38□□□□□ -2.03
PCNX1-205ENST00000553508 OR2D3Q8NGH3 330 aa2.38□□□□□ -2.03
PCNX1-205ENST00000553508 NIT2Q9NQR4 276 aa2.38□□□□□ -2.03
PCNX1-205ENST00000553508 FAT1Q14517 4588 aa2.37□□□□□ -2.03
PCNX1-205ENST00000553508 GVQW2A0A096LPI5 108 aaPredicted RBP2.37□□□□□ -2.03
PCNX1-205ENST00000553508 A0A1B0GVG6 124 aa2.37□□□□□ -2.03
PCNX1-205ENST00000553508 LINC00862A6NCI5 91 aa2.37□□□□□ -2.03
PCNX1-205ENST00000553508 SDHAF1A6NFY7 115 aa2.37□□□□□ -2.03
PCNX1-205ENST00000553508 PDE6DO43924 150 aa2.37□□□□□ -2.03
PCNX1-205ENST00000553508 IGLC6P0CF74 106 aa2.37□□□□□ -2.03
PCNX1-205ENST00000553508 MT1HL1P0DM35 61 aa2.37□□□□□ -2.03
PCNX1-205ENST00000553508 ZNF25P17030 456 aaPredicted RBP2.37□□□□□ -2.03
PCNX1-205ENST00000553508 RAB5CP51148 216 aa2.37□□□□□ -2.03
PCNX1-205ENST00000553508 IFITM2Q01629 132 aa2.37□□□□□ -2.03
PCNX1-205ENST00000553508 FABP9Q0Z7S8 132 aa2.37□□□□□ -2.03
PCNX1-205ENST00000553508 ZNF345Q14585 488 aa2.37□□□□□ -2.03
PCNX1-205ENST00000553508 KRTAP26-1Q6PEX3 210 aa2.37□□□□□ -2.03
PCNX1-205ENST00000553508 SPINK6Q6UWN8 80 aa2.37□□□□□ -2.03
PCNX1-205ENST00000553508 C3orf22Q8N5N4 141 aa2.37□□□□□ -2.03
PCNX1-205ENST00000553508 MBD3L1Q8WWY6 194 aa2.37□□□□□ -2.03
PCNX1-205ENST00000553508 BORCS7Q96B45 105 aa2.37□□□□□ -2.03
PCNX1-205ENST00000553508 LINC01600Q96MT4 127 aa2.37□□□□□ -2.03
PCNX1-205ENST00000553508 KRTAP4-1Q9BYQ7 146 aa2.37□□□□□ -2.03
PCNX1-205ENST00000553508 GNG13Q9P2W3 67 aa2.37□□□□□ -2.03
PCNX1-205ENST00000553508 IGHV1-58A0A0C4DH39 117 aa2.36□□□□□ -2.03
PCNX1-205ENST00000553508 IGKV3OR2-268A0A0C4DH90 116 aa2.36□□□□□ -2.03
PCNX1-205ENST00000553508 A6NED7 52 aa2.36□□□□□ -2.03
PCNX1-205ENST00000553508 COX6A2Q02221 97 aa2.36□□□□□ -2.03
PCNX1-205ENST00000553508 Q5BKY6 102 aa2.36□□□□□ -2.03
PCNX1-205ENST00000553508 OR5A1Q8NGJ0 315 aa2.36□□□□□ -2.03
PCNX1-205ENST00000553508 CARD19Q96LW7 228 aa2.36□□□□□ -2.03
PCNX1-205ENST00000553508 SIGMAR1Q99720 223 aa2.36□□□□□ -2.03
PCNX1-205ENST00000553508 TRAV1-1A0A0B4J248 108 aa2.35□□□□□ -2.03
PCNX1-205ENST00000553508 LOC107984640A0A0U1RRK4 108 aa2.35□□□□□ -2.03
PCNX1-205ENST00000553508 HMSDA8MTL9 139 aa2.35□□□□□ -2.03
PCNX1-205ENST00000553508 APOMO95445 188 aa2.35□□□□□ -2.03
PCNX1-205ENST00000553508 PPP1R17O96001 155 aa2.35□□□□□ -2.03
PCNX1-205ENST00000553508 FGF6P10767 208 aa2.35□□□□□ -2.03
PCNX1-205ENST00000553508 XCL1P47992 114 aa2.35□□□□□ -2.03
PCNX1-205ENST00000553508 LINC00313P59037 77 aa2.35□□□□□ -2.03
PCNX1-205ENST00000553508 CCL20P78556 96 aa2.35□□□□□ -2.03
PCNX1-205ENST00000553508 SS18Q15532 418 aa2.35□□□□□ -2.03
PCNX1-205ENST00000553508 LYZL1Q6UWQ5 148 aa2.35□□□□□ -2.03
PCNX1-205ENST00000553508 TCTE3Q8IZS6 198 aa2.35□□□□□ -2.03
PCNX1-205ENST00000553508 C9orf62Q8N4C0 152 aa2.35□□□□□ -2.03
PCNX1-205ENST00000553508 TSKUQ8WUA8 353 aa2.35□□□□□ -2.03
PCNX1-205ENST00000553508 CNFNQ9BYD5 112 aa2.35□□□□□ -2.03
PCNX1-205ENST00000553508 MED9Q9NWA0 146 aa2.35□□□□□ -2.03
PCNX1-205ENST00000553508 HMCN2Q8NDA2 5059 aa2.35□□□□□ -2.03
PCNX1-205ENST00000553508 TRBV24-1A0A075B6N3 115 aa2.34□□□□□ -2.03
PCNX1-205ENST00000553508 A0A096LNI7 61 aa2.34□□□□□ -2.03
PCNX1-205ENST00000553508 TRAV26-2A0A0B4J265 109 aa2.34□□□□□ -2.03
PCNX1-205ENST00000553508 C19orf71A6NCJ1 209 aa2.34□□□□□ -2.03
PCNX1-205ENST00000553508 A8MWP4 228 aa2.34□□□□□ -2.03
PCNX1-205ENST00000553508 I3L3M4 83 aa2.34□□□□□ -2.03
PCNX1-205ENST00000553508 COX7A2LO14548 114 aa2.34□□□□□ -2.03
PCNX1-205ENST00000553508 CCL25O15444 150 aa2.34□□□□□ -2.03
PCNX1-205ENST00000553508 MT-ND6P03923 174 aa2.34□□□□□ -2.03
PCNX1-205ENST00000553508 BCL2P10415 239 aa2.34□□□□□ -2.03
PCNX1-205ENST00000553508 G0S2P27469 103 aa2.34□□□□□ -2.03
PCNX1-205ENST00000553508 FCER1GP30273 86 aa2.34□□□□□ -2.03
PCNX1-205ENST00000553508 ST20Q9HBF5 79 aa2.34□□□□□ -2.03
PCNX1-205ENST00000553508 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.33□□□□□ -2.04
PCNX1-205ENST00000553508 A0A0B4J2C4 111 aa2.33□□□□□ -2.04
PCNX1-205ENST00000553508 TRBV6-5A0A0K0K1A5 114 aa2.33□□□□□ -2.04
PCNX1-205ENST00000553508 LINC00959A0A1B0GUT2 108 aa2.33□□□□□ -2.04
PCNX1-205ENST00000553508 IGKV2-29A2NJV5 120 aaPredicted RBP2.33□□□□□ -2.04
PCNX1-205ENST00000553508 C7orf77A4D0Y5 90 aa2.33□□□□□ -2.04
PCNX1-205ENST00000553508 C1orf196B1AJZ1 125 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms