RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 CDIP1Q9H305 208 aa6.63□□□□□ -1.35
NEK3-204ENST00000552973 IGLV7-46A0A075B6I9 117 aa6.62□□□□□ -1.35
NEK3-204ENST00000552973 A0A0U1RRA0 63 aa6.62□□□□□ -1.35
NEK3-204ENST00000552973 LINC00614P0C842 121 aa6.62□□□□□ -1.35
NEK3-204ENST00000552973 IFITM2Q01629 132 aa6.62□□□□□ -1.35
NEK3-204ENST00000552973 TMEM170BQ5T4T1 132 aa6.62□□□□□ -1.35
NEK3-204ENST00000552973 BAGE3Q86Y29 109 aa6.62□□□□□ -1.35
NEK3-204ENST00000552973 CBLN2Q8IUK8 224 aa6.62□□□□□ -1.35
NEK3-204ENST00000552973 PLEKHB2Q96CS7 222 aa6.62□□□□□ -1.35
NEK3-204ENST00000552973 HIGD2AQ9BW72 106 aa6.62□□□□□ -1.35
NEK3-204ENST00000552973 RPS10P5Q9NQ39 176 aa6.62□□□□□ -1.35
NEK3-204ENST00000552973 C11orf86A6NJI1 115 aa6.61□□□□□ -1.35
NEK3-204ENST00000552973 HBDP02042 147 aa6.61□□□□□ -1.35
NEK3-204ENST00000552973 C18orf32Q8TCD1 76 aa6.61□□□□□ -1.35
NEK3-204ENST00000552973 KRTAP9-2Q9BYQ4 174 aa6.61□□□□□ -1.35
NEK3-204ENST00000552973 LINC00158P58513 81 aa6.6□□□□□ -1.35
NEK3-204ENST00000552973 COX17Q14061 63 aa6.6□□□□□ -1.35
NEK3-204ENST00000552973 COMMD7Q86VX2 200 aa6.6□□□□□ -1.35
NEK3-204ENST00000552973 TRAPPC1Q9Y5R8 145 aa6.6□□□□□ -1.35
NEK3-204ENST00000552973 FAT4Q6V0I7 4981 aa6.59□□□□□ -1.36
NEK3-204ENST00000552973 MUC17Q685J3 4493 aa6.58□□□□□ -1.36
NEK3-204ENST00000552973 TPRXLQ17RH7 258 aa6.58□□□□□ -1.36
NEK3-204ENST00000552973 PPDPFQ9H3Y8 114 aa6.58□□□□□ -1.36
NEK3-204ENST00000552973 RHEBQ15382 184 aa6.57□□□□□ -1.36
NEK3-204ENST00000552973 SPRR4Q96PI1 79 aa6.57□□□□□ -1.36
NEK3-204ENST00000552973 CHTOPQ9Y3Y2 248 aaKnown RBP6.57□□□□□ -1.36
NEK3-204ENST00000552973 C10orf91Q5T1B1 145 aa6.56□□□□□ -1.36
NEK3-204ENST00000552973 DAND5Q8N907 189 aa6.56□□□□□ -1.36
NEK3-204ENST00000552973 NCR3O14931 201 aa6.55□□□□□ -1.36
NEK3-204ENST00000552973 GHRHP01286 108 aa6.55□□□□□ -1.36
NEK3-204ENST00000552973 SMIM13P0DJ93 91 aa6.55□□□□□ -1.36
NEK3-204ENST00000552973 SFTA2Q6UW10 78 aa6.55□□□□□ -1.36
NEK3-204ENST00000552973 TMEM223A0PJW6 202 aa6.54□□□□□ -1.36
NEK3-204ENST00000552973 ATP6V1G1O75348 118 aa6.54□□□□□ -1.36
NEK3-204ENST00000552973 MEIG1Q5JSS6 88 aa6.54□□□□□ -1.36
NEK3-204ENST00000552973 SPAG11AQ6PDA7 123 aa6.54□□□□□ -1.36
NEK3-204ENST00000552973 BOD1L2Q8IYS8 172 aa6.54□□□□□ -1.36
NEK3-204ENST00000552973 SMCR5Q8TEV8 140 aa6.54□□□□□ -1.36
NEK3-204ENST00000552973 CTAG1AP78358 180 aa6.53□□□□□ -1.36
NEK3-204ENST00000552973 Q8NBF4 154 aa6.53□□□□□ -1.36
NEK3-204ENST00000552973 MIR7-3HGQ8N6C7 128 aa6.52□□□□□ -1.37
NEK3-204ENST00000552973 ZNF706Q9Y5V0 76 aaPredicted RBP6.52□□□□□ -1.37
NEK3-204ENST00000552973 PRYO14603 147 aa6.51□□□□□ -1.37
NEK3-204ENST00000552973 APOC3P02656 99 aa6.51□□□□□ -1.37
NEK3-204ENST00000552973 IFI27L1Q96BM0 104 aa6.51□□□□□ -1.37
NEK3-204ENST00000552973 TRAV12-1A0A0B4J245 112 aa6.5□□□□□ -1.37
NEK3-204ENST00000552973 TRBV10-3A0A0K0K1G6 114 aa6.5□□□□□ -1.37
NEK3-204ENST00000552973 ETDCA0A1B0GVM5 59 aa6.5□□□□□ -1.37
NEK3-204ENST00000552973 SPRR1AP35321 89 aa6.5□□□□□ -1.37
NEK3-204ENST00000552973 LINC00337Q8N6G1 96 aa6.5□□□□□ -1.37
NEK3-204ENST00000552973 KCNQ1DNQ9H478 68 aa6.5□□□□□ -1.37
NEK3-204ENST00000552973 GAGE2AQ6NT46 116 aa6.49□□□□□ -1.37
NEK3-204ENST00000552973 FP248Q71RG6 208 aaPredicted RBP6.49□□□□□ -1.37
NEK3-204ENST00000552973 NDUFA12Q9UI09 145 aa6.49□□□□□ -1.37
NEK3-204ENST00000552973 KRTAP4-16G5E9R7 235 aaPredicted RBP6.48□□□□□ -1.37
NEK3-204ENST00000552973 H0Y8G0 127 aa6.48□□□□□ -1.37
NEK3-204ENST00000552973 FAM19A2Q8N3H0 131 aa6.48□□□□□ -1.37
NEK3-204ENST00000552973 CHCHD1Q96BP2 118 aaKnown RBP6.48□□□□□ -1.37
NEK3-204ENST00000552973 IGLV9-49A0A0B4J1Y8 123 aa6.47□□□□□ -1.37
NEK3-204ENST00000552973 ERC2-IT1O76042 136 aa6.47□□□□□ -1.37
NEK3-204ENST00000552973 HERV-K104P63124 156 aa6.47□□□□□ -1.37
NEK3-204ENST00000552973 KRTAP13-3Q3SY46 172 aa6.47□□□□□ -1.37
NEK3-204ENST00000552973 MYMXA0A1B0GTQ4 84 aa6.46□□□□□ -1.38
NEK3-204ENST00000552973 B5MCH6 92 aa6.46□□□□□ -1.38
NEK3-204ENST00000552973 SNAPINO95295 136 aa6.46□□□□□ -1.38
NEK3-204ENST00000552973 SPINK1P00995 79 aa6.46□□□□□ -1.38
NEK3-204ENST00000552973 LINC00587B1AMM8 73 aa6.45□□□□□ -1.38
NEK3-204ENST00000552973 HSBP1O75506 76 aa6.45□□□□□ -1.38
NEK3-204ENST00000552973 TSPEAR-AS2P59090 65 aa6.45□□□□□ -1.38
NEK3-204ENST00000552973 MOBPQ13875 183 aa6.45□□□□□ -1.38
NEK3-204ENST00000552973 LINC00483Q53H64 154 aa6.45□□□□□ -1.38
NEK3-204ENST00000552973 SVBPQ8N300 66 aa6.45□□□□□ -1.38
NEK3-204ENST00000552973 MAP1LC3CQ9BXW4 147 aa6.45□□□□□ -1.38
NEK3-204ENST00000552973 KRTAP9-6A0A140TA67 174 aa6.44□□□□□ -1.38
NEK3-204ENST00000552973 DDTP30046 118 aa6.44□□□□□ -1.38
NEK3-204ENST00000552973 S100A12P80511 92 aa6.44□□□□□ -1.38
NEK3-204ENST00000552973 NDUFA5Q16718 116 aa6.44□□□□□ -1.38
NEK3-204ENST00000552973 YPEL4Q96NS1 127 aa6.44□□□□□ -1.38
NEK3-204ENST00000552973 KRTAP4-1Q9BYQ7 146 aa6.44□□□□□ -1.38
NEK3-204ENST00000552973 ASB16-AS1Q495Z4 193 aa6.43□□□□□ -1.38
NEK3-204ENST00000552973 Q9BRP9 147 aa6.43□□□□□ -1.38
NEK3-204ENST00000552973 LEPROTO15243 131 aa6.42□□□□□ -1.38
NEK3-204ENST00000552973 TMEM238LA0A1B0GVL6 79 aa6.41□□□□□ -1.38
NEK3-204ENST00000552973 LEPROTL1O95214 131 aa6.41□□□□□ -1.38
NEK3-204ENST00000552973 SSBP3-AS1Q7Z2R9 100 aa6.41□□□□□ -1.38
NEK3-204ENST00000552973 Q8N377 158 aa6.41□□□□□ -1.38
NEK3-204ENST00000552973 PMCHL2Q9BQD1 86 aa6.41□□□□□ -1.38
NEK3-204ENST00000552973 J3QQQ9 107 aa6.4□□□□□ -1.38
NEK3-204ENST00000552973 LINC01547P58512 204 aaPredicted RBP6.4□□□□□ -1.38
NEK3-204ENST00000552973 SEC61BP60468 96 aaKnown RBP6.4□□□□□ -1.38
NEK3-204ENST00000552973 NPC2P61916 151 aa6.4□□□□□ -1.38
NEK3-204ENST00000552973 S100A7L2Q5SY68 101 aa6.4□□□□□ -1.38
NEK3-204ENST00000552973 Q6ZRX8 168 aa6.4□□□□□ -1.38
NEK3-204ENST00000552973 LOC107984156A0A0G2JMH3 177 aa6.39□□□□□ -1.39
NEK3-204ENST00000552973 TRBV10-2A0A0K0K1G8 114 aa6.39□□□□□ -1.39
NEK3-204ENST00000552973 SERF1AO75920 110 aa6.39□□□□□ -1.39
NEK3-204ENST00000552973 TRGC2P03986 189 aa6.39□□□□□ -1.39
NEK3-204ENST00000552973 FABP4P15090 132 aa6.39□□□□□ -1.39
NEK3-204ENST00000552973 C9orf153Q5TBE3 101 aa6.39□□□□□ -1.39
NEK3-204ENST00000552973 ARL17AQ8IVW1 177 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms