RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 RMI2Q96E14 147 aa7.47□□□□□ -1.21
TGFBR1-209ENST00000552516 TRBV10-3A0A0K0K1G6 114 aa7.47□□□□□ -1.21
TGFBR1-209ENST00000552516 COX7BP24311 80 aa7.47□□□□□ -1.21
TGFBR1-209ENST00000552516 TRBV30A0A0K0K1B3 111 aa7.46□□□□□ -1.21
TGFBR1-209ENST00000552516 RBM3P98179 157 aaKnown RBP7.46□□□□□ -1.21
TGFBR1-209ENST00000552516 FAM19A1Q7Z5A9 133 aa7.46□□□□□ -1.21
TGFBR1-209ENST00000552516 UBE2AP49459 152 aa7.46□□□□□ -1.21
TGFBR1-209ENST00000552516 TENM1Q9UKZ4 2725 aa7.46□□□□□ -1.22
TGFBR1-209ENST00000552516 A0A087WVE0 104 aa7.46□□□□□ -1.22
TGFBR1-209ENST00000552516 A0A1B0GX51 115 aa7.46□□□□□ -1.22
TGFBR1-209ENST00000552516 KLK5Q9Y337 293 aaPredicted RBP7.46□□□□□ -1.22
TGFBR1-209ENST00000552516 SPANXDQ9BXN6 97 aa7.46□□□□□ -1.22
TGFBR1-209ENST00000552516 OTOGQ6ZRI0 2925 aa7.45□□□□□ -1.22
TGFBR1-209ENST00000552516 LST1O00453 97 aa7.45□□□□□ -1.22
TGFBR1-209ENST00000552516 TRAV10A0A0B4J240 114 aa7.45□□□□□ -1.22
TGFBR1-209ENST00000552516 KRTAP10-11P60412 298 aa7.45□□□□□ -1.22
TGFBR1-209ENST00000552516 Q6ZRU5 148 aa7.45□□□□□ -1.22
TGFBR1-209ENST00000552516 VWFP04275 2813 aa7.45□□□□□ -1.22
TGFBR1-209ENST00000552516 IGHV3OR16-9A0A0B4J2B5 98 aa7.45□□□□□ -1.22
TGFBR1-209ENST00000552516 SMCPP49901 116 aaPredicted RBP7.44□□□□□ -1.22
TGFBR1-209ENST00000552516 ENHOQ6UWT2 76 aa7.44□□□□□ -1.22
TGFBR1-209ENST00000552516 H3BT86 120 aa7.44□□□□□ -1.22
TGFBR1-209ENST00000552516 FAM218AQ96MZ4 157 aa7.43□□□□□ -1.22
TGFBR1-209ENST00000552516 DEFB116Q30KQ4 102 aa7.43□□□□□ -1.22
TGFBR1-209ENST00000552516 USP17L23D6RBM5 183 aa7.43□□□□□ -1.22
TGFBR1-209ENST00000552516 NDUFS5O43920 106 aa7.42□□□□□ -1.22
TGFBR1-209ENST00000552516 C19orf73Q9NVV2 129 aa7.42□□□□□ -1.22
TGFBR1-209ENST00000552516 C3orf22Q8N5N4 141 aa7.42□□□□□ -1.22
TGFBR1-209ENST00000552516 NREPQ16612 68 aa7.41□□□□□ -1.22
TGFBR1-209ENST00000552516 Q8IZM0 81 aa7.41□□□□□ -1.22
TGFBR1-209ENST00000552516 CSNK1G2-AS1Q8NCQ2 148 aa7.41□□□□□ -1.22
TGFBR1-209ENST00000552516 Q8NAQ8 132 aa7.41□□□□□ -1.22
TGFBR1-209ENST00000552516 CITED1Q99966 193 aa7.41□□□□□ -1.22
TGFBR1-209ENST00000552516 PKD1L1Q8TDX9 2849 aa7.41□□□□□ -1.22
TGFBR1-209ENST00000552516 PLAC8L1A1L4L8 177 aa7.4□□□□□ -1.22
TGFBR1-209ENST00000552516 CCKP06307 115 aa7.4□□□□□ -1.22
TGFBR1-209ENST00000552516 TMEM256-PLSCR3K7ERE1 68 aa7.39□□□□□ -1.23
TGFBR1-209ENST00000552516 GHRHP01286 108 aa7.39□□□□□ -1.23
TGFBR1-209ENST00000552516 ZNF73O43830 326 aaPredicted RBP7.39□□□□□ -1.23
TGFBR1-209ENST00000552516 LINC01546A6NGU7 62 aa7.38□□□□□ -1.23
TGFBR1-209ENST00000552516 SMIM20Q8N5G0 67 aa7.38□□□□□ -1.23
TGFBR1-209ENST00000552516 PRLHP81277 87 aa7.38□□□□□ -1.23
TGFBR1-209ENST00000552516 CDK2AP2O75956 126 aa7.37□□□□□ -1.23
TGFBR1-209ENST00000552516 IGLV9-49A0A0B4J1Y8 123 aa7.37□□□□□ -1.23
TGFBR1-209ENST00000552516 KLK9Q2XQG4 91 aa7.37□□□□□ -1.23
TGFBR1-209ENST00000552516 SPINK6Q6UWN8 80 aa7.37□□□□□ -1.23
TGFBR1-209ENST00000552516 Q8N9L7 120 aa7.37□□□□□ -1.23
TGFBR1-209ENST00000552516 PRR4Q16378 134 aa7.36□□□□□ -1.23
TGFBR1-209ENST00000552516 CSDC2Q9Y534 153 aaKnown RBP7.36□□□□□ -1.23
TGFBR1-209ENST00000552516 IGLV5-39A0A0G2JS06 123 aa7.36□□□□□ -1.23
TGFBR1-209ENST00000552516 CCDC179H3BU77 68 aa7.36□□□□□ -1.23
TGFBR1-209ENST00000552516 TIMM17BO60830 172 aa7.36□□□□□ -1.23
TGFBR1-209ENST00000552516 NDUFV3P56181 108 aaKnown RBP7.35□□□□□ -1.23
TGFBR1-209ENST00000552516 CHTF8P0CG12 524 aa7.35□□□□□ -1.23
TGFBR1-209ENST00000552516 UPK3BQ9BT76 320 aa7.35□□□□□ -1.23
TGFBR1-209ENST00000552516 H0Y9J4 135 aa7.35□□□□□ -1.23
TGFBR1-209ENST00000552516 C6orf48Q9UBA6 75 aa7.35□□□□□ -1.23
TGFBR1-209ENST00000552516 FAM168BA1KXE4 195 aa7.34□□□□□ -1.23
TGFBR1-209ENST00000552516 C20orf197Q8N268 126 aa7.34□□□□□ -1.23
TGFBR1-209ENST00000552516 LITAFQ99732 161 aa7.34□□□□□ -1.23
TGFBR1-209ENST00000552516 SNURFQ9Y675 71 aa7.33□□□□□ -1.24
TGFBR1-209ENST00000552516 A0A1B0GUV1 79 aa7.33□□□□□ -1.24
TGFBR1-209ENST00000552516 A0A0G2JQZ4 141 aa7.33□□□□□ -1.24
TGFBR1-209ENST00000552516 A0A1W2PNN7 141 aa7.33□□□□□ -1.24
TGFBR1-209ENST00000552516 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.33□□□□□ -1.24
TGFBR1-209ENST00000552516 Q8N814 137 aa7.33□□□□□ -1.24
TGFBR1-209ENST00000552516 JMJD7-PLA2G4BH0Y9G9 81 aa7.33□□□□□ -1.24
TGFBR1-209ENST00000552516 MDFIQ99750 246 aa7.33□□□□□ -1.24
TGFBR1-209ENST00000552516 M0QXV9 152 aa7.32□□□□□ -1.24
TGFBR1-209ENST00000552516 CASC10Q5T4H9 136 aa7.32□□□□□ -1.24
TGFBR1-209ENST00000552516 WFDC13Q8IUB5 93 aa7.31□□□□□ -1.24
TGFBR1-209ENST00000552516 PRO0461Q9UI25 63 aa7.31□□□□□ -1.24
TGFBR1-209ENST00000552516 LINC00588Q9Y4M8 146 aa7.31□□□□□ -1.24
TGFBR1-209ENST00000552516 LINC00643Q86TS7 51 aa7.3□□□□□ -1.24
TGFBR1-209ENST00000552516 M0R378 163 aa7.3□□□□□ -1.24
TGFBR1-209ENST00000552516 RPL28P46779 137 aaKnown RBP7.3□□□□□ -1.24
TGFBR1-209ENST00000552516 LINC00846Q9NV44 126 aa7.3□□□□□ -1.24
TGFBR1-209ENST00000552516 CDIP1Q9H305 208 aa7.3□□□□□ -1.24
TGFBR1-209ENST00000552516 BPY2O14599 106 aa7.29□□□□□ -1.24
TGFBR1-209ENST00000552516 K7EIL1 84 aa7.29□□□□□ -1.24
TGFBR1-209ENST00000552516 DNAH10OSP0CZ25 163 aa7.29□□□□□ -1.24
TGFBR1-209ENST00000552516 NDUFC2-KCTD14E9PQ53 114 aa7.29□□□□□ -1.24
TGFBR1-209ENST00000552516 ACYP1P07311 99 aa7.28□□□□□ -1.24
TGFBR1-209ENST00000552516 TENM3Q9P273 2699 aa7.28□□□□□ -1.24
TGFBR1-209ENST00000552516 C9orf129Q5T035 196 aaKnown RBP7.27□□□□□ -1.25
TGFBR1-209ENST00000552516 FAM104AQ969W3 186 aa7.26□□□□□ -1.25
TGFBR1-209ENST00000552516 EGFEM1PQ0D2K5 195 aa7.26□□□□□ -1.25
TGFBR1-209ENST00000552516 IGLV5-45A0A087WSX0 123 aa7.26□□□□□ -1.25
TGFBR1-209ENST00000552516 Q6ZRP5 223 aa7.26□□□□□ -1.25
TGFBR1-209ENST00000552516 ST20-AS1Q8NBB2 130 aa7.26□□□□□ -1.25
TGFBR1-209ENST00000552516 C7orf33Q8WU49 177 aa7.24□□□□□ -1.25
TGFBR1-209ENST00000552516 C22orf24Q9Y442 160 aa7.24□□□□□ -1.25
TGFBR1-209ENST00000552516 COX17Q14061 63 aa7.24□□□□□ -1.25
TGFBR1-209ENST00000552516 LINC01556Q5JQF7 62 aa7.24□□□□□ -1.25
TGFBR1-209ENST00000552516 LOC107984640A0A0U1RRK4 108 aa7.24□□□□□ -1.25
TGFBR1-209ENST00000552516 FAM30AQ9NZY2 134 aa7.23□□□□□ -1.25
TGFBR1-209ENST00000552516 PHF5AQ7RTV0 110 aaKnown RBP7.23□□□□□ -1.25
TGFBR1-209ENST00000552516 RETNLBQ9BQ08 111 aa7.23□□□□□ -1.25
TGFBR1-209ENST00000552516 B9D2Q9BPU9 175 aa7.22□□□□□ -1.25
TGFBR1-209ENST00000552516 SERTAD4-AS1Q5TG53 156 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms