RNA–Protein interactions for RNA: ENST00000552483.5

CNOT2-239, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-239ENST00000552483 LINC01545Q5VT33 79 aa6.65□□□□□ -1.34
CNOT2-239ENST00000552483 NDUFA12Q9UI09 145 aa6.65□□□□□ -1.34
CNOT2-239ENST00000552483 PLA2G2DQ9UNK4 145 aa6.65□□□□□ -1.34
CNOT2-239ENST00000552483 IGLV5-37A0A075B6J1 123 aa6.64□□□□□ -1.35
CNOT2-239ENST00000552483 SMIM13P0DJ93 91 aa6.64□□□□□ -1.35
CNOT2-239ENST00000552483 GAGE10A6NGK3 116 aa6.63□□□□□ -1.35
CNOT2-239ENST00000552483 J3QQQ9 107 aa6.63□□□□□ -1.35
CNOT2-239ENST00000552483 IGLV7-43P04211 117 aa6.63□□□□□ -1.35
CNOT2-239ENST00000552483 MT1HL1P0DM35 61 aa6.63□□□□□ -1.35
CNOT2-239ENST00000552483 VPREB1P12018 145 aa6.63□□□□□ -1.35
CNOT2-239ENST00000552483 LINC00158P58513 81 aa6.63□□□□□ -1.35
CNOT2-239ENST00000552483 COX17Q14061 63 aa6.63□□□□□ -1.35
CNOT2-239ENST00000552483 SFTA2Q6UW10 78 aa6.63□□□□□ -1.35
CNOT2-239ENST00000552483 PET117Q6UWS5 81 aa6.63□□□□□ -1.35
CNOT2-239ENST00000552483 MRPL55Q7Z7F7 128 aaKnown RBP6.63□□□□□ -1.35
CNOT2-239ENST00000552483 PLEKHB2Q96CS7 222 aa6.63□□□□□ -1.35
CNOT2-239ENST00000552483 LINC00167Q96N53 147 aa6.63□□□□□ -1.35
CNOT2-239ENST00000552483 TP73-AS1Q9UF72 201 aa6.63□□□□□ -1.35
CNOT2-239ENST00000552483 OXTP01178 125 aa6.62□□□□□ -1.35
CNOT2-239ENST00000552483 KRTDAPP60985 99 aa6.62□□□□□ -1.35
CNOT2-239ENST00000552483 MEIG1Q5JSS6 88 aa6.62□□□□□ -1.35
CNOT2-239ENST00000552483 SPINK6Q6UWN8 80 aa6.62□□□□□ -1.35
CNOT2-239ENST00000552483 MYMXA0A1B0GTQ4 84 aa6.61□□□□□ -1.35
CNOT2-239ENST00000552483 RPL37AP8A6NKH3 93 aa6.61□□□□□ -1.35
CNOT2-239ENST00000552483 E9PLD3 99 aa6.61□□□□□ -1.35
CNOT2-239ENST00000552483 HERVK_113P61574 105 aa6.61□□□□□ -1.35
CNOT2-239ENST00000552483 HIST3H2BBQ8N257 126 aa6.61□□□□□ -1.35
CNOT2-239ENST00000552483 MIR7-3HGQ8N6C7 128 aa6.61□□□□□ -1.35
CNOT2-239ENST00000552483 IGKV2D-26A0A0A0MRZ7 120 aa6.6□□□□□ -1.35
CNOT2-239ENST00000552483 HERV-K104P63124 156 aa6.6□□□□□ -1.35
CNOT2-239ENST00000552483 LBHQ53QV2 105 aaPredicted RBP6.6□□□□□ -1.35
CNOT2-239ENST00000552483 DAND5Q8N907 189 aa6.6□□□□□ -1.35
CNOT2-239ENST00000552483 TTTY13Q9BZ97 58 aa6.6□□□□□ -1.35
CNOT2-239ENST00000552483 DMBT1Q9UGM3 2413 aaPredicted RBP6.6□□□□□ -1.35
CNOT2-239ENST00000552483 LGALS3P17931 250 aaKnown RBP6.59□□□□□ -1.35
CNOT2-239ENST00000552483 NKAPP1Q8N9T2 125 aa6.59□□□□□ -1.35
CNOT2-239ENST00000552483 ATOH7Q8N100 152 aa6.58□□□□□ -1.36
CNOT2-239ENST00000552483 HIST1H2BLQ99880 126 aa6.58□□□□□ -1.36
CNOT2-239ENST00000552483 HERC1Q15751 4861 aa6.57□□□□□ -1.36
CNOT2-239ENST00000552483 IGKV2-28A0A075B6P5 120 aa6.57□□□□□ -1.36
CNOT2-239ENST00000552483 A0A0J9YXY3 114 aa6.57□□□□□ -1.36
CNOT2-239ENST00000552483 EIF4EBP3O60516 100 aaPredicted RBP6.57□□□□□ -1.36
CNOT2-239ENST00000552483 IGKV2D-28P01615 120 aa6.57□□□□□ -1.36
CNOT2-239ENST00000552483 NMUP48645 174 aa6.57□□□□□ -1.36
CNOT2-239ENST00000552483 ANKRD39Q53RE8 183 aa6.57□□□□□ -1.36
CNOT2-239ENST00000552483 LINC01600Q96MT4 127 aa6.57□□□□□ -1.36
CNOT2-239ENST00000552483 TNXBP22105 4242 aa6.57□□□□□ -1.36
CNOT2-239ENST00000552483 IGLV1-50A0A075B6I6 118 aa6.56□□□□□ -1.36
CNOT2-239ENST00000552483 TMEM238C9JI98 176 aa6.56□□□□□ -1.36
CNOT2-239ENST00000552483 H0Y9J4 135 aa6.56□□□□□ -1.36
CNOT2-239ENST00000552483 RPL24P83731 157 aaKnown RBP6.56□□□□□ -1.36
CNOT2-239ENST00000552483 ADAMTSL4-AS1Q5T5F5 129 aa6.56□□□□□ -1.36
CNOT2-239ENST00000552483 SOSTDC1Q6X4U4 206 aa6.56□□□□□ -1.36
CNOT2-239ENST00000552483 BOD1L2Q8IYS8 172 aa6.56□□□□□ -1.36
CNOT2-239ENST00000552483 NCR3O14931 201 aa6.55□□□□□ -1.36
CNOT2-239ENST00000552483 BCE1O60756 84 aa6.55□□□□□ -1.36
CNOT2-239ENST00000552483 KRTAP1-4P0C5Y4 121 aa6.55□□□□□ -1.36
CNOT2-239ENST00000552483 SNRPEP62304 92 aaKnown RBP6.55□□□□□ -1.36
CNOT2-239ENST00000552483 LITAFQ99732 161 aa6.55□□□□□ -1.36
CNOT2-239ENST00000552483 LOC107984156A0A0G2JMH3 177 aa6.54□□□□□ -1.36
CNOT2-239ENST00000552483 M0R378 163 aa6.54□□□□□ -1.36
CNOT2-239ENST00000552483 ZNF861PO60384 105 aa6.54□□□□□ -1.36
CNOT2-239ENST00000552483 NPC2P61916 151 aa6.54□□□□□ -1.36
CNOT2-239ENST00000552483 REG3GQ6UW15 175 aa6.54□□□□□ -1.36
CNOT2-239ENST00000552483 KRTAP13-1Q8IUC0 172 aa6.54□□□□□ -1.36
CNOT2-239ENST00000552483 ARL17AQ8IVW1 177 aa6.54□□□□□ -1.36
CNOT2-239ENST00000552483 DIRC1Q969H9 104 aa6.54□□□□□ -1.36
CNOT2-239ENST00000552483 C20orf202A1L168 122 aa6.53□□□□□ -1.36
CNOT2-239ENST00000552483 C5orf52A6NGY3 159 aa6.53□□□□□ -1.36
CNOT2-239ENST00000552483 ZNF815PA8K554 130 aa6.53□□□□□ -1.36
CNOT2-239ENST00000552483 LINC00587B1AMM8 73 aa6.53□□□□□ -1.36
CNOT2-239ENST00000552483 S100A6P06703 90 aa6.53□□□□□ -1.36
CNOT2-239ENST00000552483 S100A2P29034 98 aa6.53□□□□□ -1.36
CNOT2-239ENST00000552483 KRTAP10-8P60410 259 aa6.53□□□□□ -1.36
CNOT2-239ENST00000552483 TMEM126AQ9H061 195 aa6.53□□□□□ -1.36
CNOT2-239ENST00000552483 PRLHP81277 87 aa6.52□□□□□ -1.37
CNOT2-239ENST00000552483 TRBV10-3A0A0K0K1G6 114 aa6.51□□□□□ -1.37
CNOT2-239ENST00000552483 PCP2Q8IVA1 136 aa6.51□□□□□ -1.37
CNOT2-239ENST00000552483 PRR26Q8N8Z3 221 aa6.51□□□□□ -1.37
CNOT2-239ENST00000552483 FAM19A1Q7Z5A9 133 aa6.5□□□□□ -1.37
CNOT2-239ENST00000552483 TIMM17BO60830 172 aa6.49□□□□□ -1.37
CNOT2-239ENST00000552483 RPL28P46779 137 aaKnown RBP6.49□□□□□ -1.37
CNOT2-239ENST00000552483 UBE2AP49459 152 aa6.49□□□□□ -1.37
CNOT2-239ENST00000552483 LINC00308Q8TCZ7 52 aa6.49□□□□□ -1.37
CNOT2-239ENST00000552483 LOC100996750A0A140TA64 210 aa6.48□□□□□ -1.37
CNOT2-239ENST00000552483 PRYO14603 147 aa6.48□□□□□ -1.37
CNOT2-239ENST00000552483 SPRR1AP35321 89 aa6.48□□□□□ -1.37
CNOT2-239ENST00000552483 KRTAP4-6Q9BYQ5 205 aa6.48□□□□□ -1.37
CNOT2-239ENST00000552483 TRBV10-2A0A0K0K1G8 114 aa6.47□□□□□ -1.37
CNOT2-239ENST00000552483 KRTAP4-16G5E9R7 235 aaPredicted RBP6.47□□□□□ -1.37
CNOT2-239ENST00000552483 NDUFC2O95298 119 aa6.47□□□□□ -1.37
CNOT2-239ENST00000552483 GHRHP01286 108 aa6.47□□□□□ -1.37
CNOT2-239ENST00000552483 MIEN1Q9BRT3 115 aa6.47□□□□□ -1.37
CNOT2-239ENST00000552483 KCNQ1DNQ9H478 68 aa6.47□□□□□ -1.37
CNOT2-239ENST00000552483 SPANXB1Q9NS25 103 aaPredicted RBP6.47□□□□□ -1.37
CNOT2-239ENST00000552483 ANAPC11Q9NYG5 84 aa6.47□□□□□ -1.37
CNOT2-239ENST00000552483 DDTP30046 118 aa6.46□□□□□ -1.38
CNOT2-239ENST00000552483 A0A087X002 238 aa6.45□□□□□ -1.38
CNOT2-239ENST00000552483 IGLV6-57P01721 117 aa6.45□□□□□ -1.38
CNOT2-239ENST00000552483 SPANXDQ9BXN6 97 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms