RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	TOMM7	Q9P0U1	55 aa		4.18	□□□□□ -1.74
CNOT2-238	ENST00000552422	NDUFC2-KCTD14	E9PQ53	114 aa		4.17	□□□□□ -1.74
CNOT2-238	ENST00000552422		F8VRH5	84 aa		4.17	□□□□□ -1.74
CNOT2-238	ENST00000552422	KRTAP10-4	P60372	401 aa	Predicted RBP	4.17	□□□□□ -1.74
CNOT2-238	ENST00000552422	GAGE2B	Q13066	116 aa		4.17	□□□□□ -1.74
CNOT2-238	ENST00000552422		Q6ZRP5	223 aa		4.17	□□□□□ -1.74
CNOT2-238	ENST00000552422	STPG4	Q8N801	248 aa		4.17	□□□□□ -1.74
CNOT2-238	ENST00000552422	SVIP	Q8NHG7	77 aa		4.17	□□□□□ -1.74
CNOT2-238	ENST00000552422	COX7B2	Q8TF08	81 aa		4.17	□□□□□ -1.74
CNOT2-238	ENST00000552422	DPH3	Q96FX2	82 aa		4.17	□□□□□ -1.74
CNOT2-238	ENST00000552422	HSPB8	Q9UJY1	196 aa		4.17	□□□□□ -1.74
CNOT2-238	ENST00000552422	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.17	□□□□□ -1.74
CNOT2-238	ENST00000552422	LRP1	Q07954	4544 aa	Known RBP	4.17	□□□□□ -1.74
CNOT2-238	ENST00000552422	C9orf116	Q5BN46	136 aa	Predicted RBP	4.16	□□□□□ -1.74
CNOT2-238	ENST00000552422	COA6	Q5JTJ3	125 aa	Known RBP	4.16	□□□□□ -1.74
CNOT2-238	ENST00000552422	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.16	□□□□□ -1.74
CNOT2-238	ENST00000552422	FABP4	P15090	132 aa		4.15	□□□□□ -1.75
CNOT2-238	ENST00000552422	TMEM170B	Q5T4T1	132 aa		4.15	□□□□□ -1.75
CNOT2-238	ENST00000552422	FAT3	Q8TDW7	4589 aa		4.14	□□□□□ -1.75
CNOT2-238	ENST00000552422		A0A1W2PNN7	141 aa		4.14	□□□□□ -1.75
CNOT2-238	ENST00000552422	TMEM223	A0PJW6	202 aa		4.14	□□□□□ -1.75
CNOT2-238	ENST00000552422		H0Y8G0	127 aa		4.14	□□□□□ -1.75
CNOT2-238	ENST00000552422	PLN	P26678	52 aa		4.14	□□□□□ -1.75
CNOT2-238	ENST00000552422	RPL37A	P61513	92 aa	Known RBP	4.14	□□□□□ -1.75
CNOT2-238	ENST00000552422	GAGE2E	Q4V326	116 aa		4.14	□□□□□ -1.75
CNOT2-238	ENST00000552422	C9orf129	Q5T035	196 aa	Known RBP	4.14	□□□□□ -1.75
CNOT2-238	ENST00000552422	SFTA2	Q6UW10	78 aa		4.14	□□□□□ -1.75
CNOT2-238	ENST00000552422	C7orf33	Q8WU49	177 aa		4.14	□□□□□ -1.75
CNOT2-238	ENST00000552422	MAP1LC3C	Q9BXW4	147 aa		4.14	□□□□□ -1.75
CNOT2-238	ENST00000552422	GAGE2D	Q9UEU5	116 aa		4.14	□□□□□ -1.75
CNOT2-238	ENST00000552422	FAM168B	A1KXE4	195 aa		4.13	□□□□□ -1.75
CNOT2-238	ENST00000552422	INAFM2	P0DMQ5	153 aa		4.13	□□□□□ -1.75
CNOT2-238	ENST00000552422	PRR3	P79522	188 aa	Known RBP	4.13	□□□□□ -1.75
CNOT2-238	ENST00000552422	KRTAP7-1	Q8IUC3	87 aa		4.13	□□□□□ -1.75
CNOT2-238	ENST00000552422	ZNF625	Q96I27	306 aa	Predicted RBP	4.13	□□□□□ -1.75
CNOT2-238	ENST00000552422	IGLV5-37	A0A075B6J1	123 aa		4.12	□□□□□ -1.75
CNOT2-238	ENST00000552422	SYS1-DBNDD2	H3BUS1	97 aa		4.12	□□□□□ -1.75
CNOT2-238	ENST00000552422	DPM2	O94777	84 aa		4.12	□□□□□ -1.75
CNOT2-238	ENST00000552422	XAGE1A	Q9HD64	81 aa		4.12	□□□□□ -1.75
CNOT2-238	ENST00000552422	HERC1	Q15751	4861 aa		4.12	□□□□□ -1.75
CNOT2-238	ENST00000552422		M0QXV9	152 aa		4.11	□□□□□ -1.75
CNOT2-238	ENST00000552422	IGKC	P01834	107 aa		4.11	□□□□□ -1.75
CNOT2-238	ENST00000552422	HNRNPA3	P51991	378 aa	Known RBP	4.11	□□□□□ -1.75
CNOT2-238	ENST00000552422	COX17	Q14061	63 aa		4.11	□□□□□ -1.75
CNOT2-238	ENST00000552422	LINC01545	Q5VT33	79 aa		4.11	□□□□□ -1.75
CNOT2-238	ENST00000552422	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.11	□□□□□ -1.75
CNOT2-238	ENST00000552422	PMCHL2	Q9BQD1	86 aa		4.11	□□□□□ -1.75
CNOT2-238	ENST00000552422	PAM16	Q9Y3D7	125 aa		4.11	□□□□□ -1.75
CNOT2-238	ENST00000552422	PFN2	P35080	140 aa		4.1	□□□□□ -1.75
CNOT2-238	ENST00000552422	TSPEAR-AS2	P59090	65 aa		4.1	□□□□□ -1.75
CNOT2-238	ENST00000552422	SERTAD4-AS1	Q5TG53	156 aa		4.1	□□□□□ -1.75
CNOT2-238	ENST00000552422	PET117	Q6UWS5	81 aa		4.1	□□□□□ -1.75
CNOT2-238	ENST00000552422	PHF5A	Q7RTV0	110 aa	Known RBP	4.1	□□□□□ -1.75
CNOT2-238	ENST00000552422	ERG28	Q9UKR5	140 aa		4.1	□□□□□ -1.75
CNOT2-238	ENST00000552422	LEPROT	O15243	131 aa		4.09	□□□□□ -1.75
CNOT2-238	ENST00000552422	C3orf79	P0CE67	100 aa		4.09	□□□□□ -1.75
CNOT2-238	ENST00000552422	HERVK_113	P61574	105 aa		4.09	□□□□□ -1.75
CNOT2-238	ENST00000552422	HERV-K104	P63124	156 aa		4.09	□□□□□ -1.75
CNOT2-238	ENST00000552422	PLEKHB2	Q96CS7	222 aa		4.09	□□□□□ -1.75
CNOT2-238	ENST00000552422	SND1-IT1	Q9HBX3	110 aa		4.09	□□□□□ -1.75
CNOT2-238	ENST00000552422	TP73-AS1	Q9UF72	201 aa		4.09	□□□□□ -1.75
CNOT2-238	ENST00000552422	NDUFA12	Q9UI09	145 aa		4.09	□□□□□ -1.75
CNOT2-238	ENST00000552422	PSORS1C2	Q9UIG4	136 aa		4.09	□□□□□ -1.75
CNOT2-238	ENST00000552422	TNXB	P22105	4242 aa		4.08	□□□□□ -1.76
CNOT2-238	ENST00000552422		J3QQQ9	107 aa		4.08	□□□□□ -1.76
CNOT2-238	ENST00000552422	NMU	P48645	174 aa		4.08	□□□□□ -1.76
CNOT2-238	ENST00000552422	KRTDAP	P60985	99 aa		4.08	□□□□□ -1.76
CNOT2-238	ENST00000552422	KRTAP11-1	Q8IUC1	163 aa		4.08	□□□□□ -1.76
CNOT2-238	ENST00000552422	HIST3H2BB	Q8N257	126 aa		4.08	□□□□□ -1.76
CNOT2-238	ENST00000552422	MYMX	A0A1B0GTQ4	84 aa		4.07	□□□□□ -1.76
CNOT2-238	ENST00000552422	LOC105371267	A0A1B0GV96	52 aa		4.07	□□□□□ -1.76
CNOT2-238	ENST00000552422	C5orf52	A6NGY3	159 aa		4.07	□□□□□ -1.76
CNOT2-238	ENST00000552422		E9PLD3	99 aa		4.07	□□□□□ -1.76
CNOT2-238	ENST00000552422	MRPL55	Q7Z7F7	128 aa	Known RBP	4.07	□□□□□ -1.76
CNOT2-238	ENST00000552422	HIST1H2BL	Q99880	126 aa		4.07	□□□□□ -1.76
CNOT2-238	ENST00000552422	C22orf24	Q9Y442	160 aa		4.07	□□□□□ -1.76
CNOT2-238	ENST00000552422	C20orf202	A1L168	122 aa		4.06	□□□□□ -1.76
CNOT2-238	ENST00000552422	LINC00587	B1AMM8	73 aa		4.06	□□□□□ -1.76
CNOT2-238	ENST00000552422	S100A6	P06703	90 aa		4.06	□□□□□ -1.76
CNOT2-238	ENST00000552422	SMIM13	P0DJ93	91 aa		4.06	□□□□□ -1.76
CNOT2-238	ENST00000552422	VPREB1	P12018	145 aa		4.06	□□□□□ -1.76
CNOT2-238	ENST00000552422	LGALS3	P17931	250 aa	Known RBP	4.06	□□□□□ -1.76
CNOT2-238	ENST00000552422	LINC00158	P58513	81 aa		4.06	□□□□□ -1.76
CNOT2-238	ENST00000552422	UBE2B	P63146	152 aa		4.06	□□□□□ -1.76
CNOT2-238	ENST00000552422	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
CNOT2-238	ENST00000552422	LBH	Q53QV2	105 aa	Predicted RBP	4.06	□□□□□ -1.76
CNOT2-238	ENST00000552422	MEIG1	Q5JSS6	88 aa		4.06	□□□□□ -1.76
CNOT2-238	ENST00000552422	C1orf137	Q5JT78	98 aa		4.06	□□□□□ -1.76
CNOT2-238	ENST00000552422	NKAPP1	Q8N9T2	125 aa		4.06	□□□□□ -1.76
CNOT2-238	ENST00000552422		Q8NDZ9	215 aa		4.06	□□□□□ -1.76
CNOT2-238	ENST00000552422		A0A0U1RRA0	63 aa		4.05	□□□□□ -1.76
CNOT2-238	ENST00000552422	OXT	P01178	125 aa		4.05	□□□□□ -1.76
CNOT2-238	ENST00000552422	IGLV7-43	P04211	117 aa		4.05	□□□□□ -1.76
CNOT2-238	ENST00000552422	S100A2	P29034	98 aa		4.05	□□□□□ -1.76
CNOT2-238	ENST00000552422	AKR1D1	P51857	326 aa		4.05	□□□□□ -1.76
CNOT2-238	ENST00000552422	SPINK6	Q6UWN8	80 aa		4.05	□□□□□ -1.76
CNOT2-238	ENST00000552422	MIR7-3HG	Q8N6C7	128 aa		4.05	□□□□□ -1.76
CNOT2-238	ENST00000552422	IGKV2D-26	A0A0A0MRZ7	120 aa		4.04	□□□□□ -1.76
CNOT2-238	ENST00000552422	LOC107984156	A0A0G2JMH3	177 aa		4.04	□□□□□ -1.76
CNOT2-238	ENST00000552422		A0A0J9YXY3	114 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms