RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 DEFA5Q01523 94 aa2.77□□□□□ -1.97
CPSF6-206ENST00000550987 MIC13Q5XKP0 118 aa2.77□□□□□ -1.97
CPSF6-206ENST00000550987 CLEC2BQ92478 149 aa2.77□□□□□ -1.97
CPSF6-206ENST00000550987 CHCHD1Q96BP2 118 aaKnown RBP2.77□□□□□ -1.97
CPSF6-206ENST00000550987 LY96Q9Y6Y9 160 aa2.77□□□□□ -1.97
CPSF6-206ENST00000550987 TMEM235A6NFC5 223 aa2.76□□□□□ -1.97
CPSF6-206ENST00000550987 IGKV4-1P06312 121 aa2.76□□□□□ -1.97
CPSF6-206ENST00000550987 RPS27P42677 84 aaKnown RBP2.76□□□□□ -1.97
CPSF6-206ENST00000550987 FXYD2P54710 66 aa2.76□□□□□ -1.97
CPSF6-206ENST00000550987 SS18Q15532 418 aa2.76□□□□□ -1.97
CPSF6-206ENST00000550987 HMGN3Q15651 99 aa2.76□□□□□ -1.97
CPSF6-206ENST00000550987 C5orf56Q8N8D9 126 aa2.76□□□□□ -1.97
CPSF6-206ENST00000550987 C4orf3Q8WVX3 66 aa2.76□□□□□ -1.97
CPSF6-206ENST00000550987 LSM10Q969L4 123 aaKnown RBP2.76□□□□□ -1.97
CPSF6-206ENST00000550987 ZNF737O75373 536 aa2.75□□□□□ -1.97
CPSF6-206ENST00000550987 SFT2D2O95562 160 aa2.75□□□□□ -1.97
CPSF6-206ENST00000550987 IL5P05113 134 aa2.75□□□□□ -1.97
CPSF6-206ENST00000550987 CTSGP08311 255 aa2.75□□□□□ -1.97
CPSF6-206ENST00000550987 EDDM3BP56851 147 aa2.75□□□□□ -1.97
CPSF6-206ENST00000550987 FXYD6P3P58550 94 aa2.75□□□□□ -1.97
CPSF6-206ENST00000550987 KRTDAPP60985 99 aa2.75□□□□□ -1.97
CPSF6-206ENST00000550987 SEC11AP67812 179 aa2.75□□□□□ -1.97
CPSF6-206ENST00000550987 KISS1Q15726 138 aa2.75□□□□□ -1.97
CPSF6-206ENST00000550987 ADIRFQ15847 76 aa2.75□□□□□ -1.97
CPSF6-206ENST00000550987 UNQ5815/PRO19632Q6UWF5 114 aa2.75□□□□□ -1.97
CPSF6-206ENST00000550987 C5orf38Q86SI9 138 aa2.75□□□□□ -1.97
CPSF6-206ENST00000550987 AQP3Q92482 292 aa2.75□□□□□ -1.97
CPSF6-206ENST00000550987 TIMM9Q9Y5J7 89 aa2.75□□□□□ -1.97
CPSF6-206ENST00000550987 TRAV14DV4A0A0A6YYC5 116 aa2.74□□□□□ -1.97
CPSF6-206ENST00000550987 IGHV1-24A0A0C4DH33 117 aa2.74□□□□□ -1.97
CPSF6-206ENST00000550987 IGLC7A0M8Q6 106 aa2.74□□□□□ -1.97
CPSF6-206ENST00000550987 ATOX1O00244 68 aa2.74□□□□□ -1.97
CPSF6-206ENST00000550987 FAM229BQ4G0N7 80 aa2.74□□□□□ -1.97
CPSF6-206ENST00000550987 ALKAL2Q6UX46 152 aa2.74□□□□□ -1.97
CPSF6-206ENST00000550987 LINC00322Q6ZN03 302 aaPredicted RBP2.74□□□□□ -1.97
CPSF6-206ENST00000550987 MYOZ3Q8TDC0 251 aa2.74□□□□□ -1.97
CPSF6-206ENST00000550987 S100A16Q96FQ6 103 aaKnown RBP2.74□□□□□ -1.97
CPSF6-206ENST00000550987 IMMP2LQ96T52 175 aa2.74□□□□□ -1.97
CPSF6-206ENST00000550987 MGST2Q99735 147 aa2.74□□□□□ -1.97
CPSF6-206ENST00000550987 SLC50A1Q9BRV3 221 aa2.74□□□□□ -1.97
CPSF6-206ENST00000550987 TRAV2A0A0B4J234 112 aa2.73□□□□□ -1.97
CPSF6-206ENST00000550987 TRBV7-7A0A0K0K1E9 115 aa2.73□□□□□ -1.97
CPSF6-206ENST00000550987 A0A1W2PNM2 257 aa2.73□□□□□ -1.97
CPSF6-206ENST00000550987 hDV103S1A0JD37 113 aa2.73□□□□□ -1.97
CPSF6-206ENST00000550987 RBAKDNA6NC62 111 aa2.73□□□□□ -1.97
CPSF6-206ENST00000550987 ZNF705FA8MVS1 300 aaPredicted RBP2.73□□□□□ -1.97
CPSF6-206ENST00000550987 H3BPC8 53 aa2.73□□□□□ -1.97
CPSF6-206ENST00000550987 GNGT2O14610 69 aa2.73□□□□□ -1.97
CPSF6-206ENST00000550987 IGLV1-51P01701 117 aa2.73□□□□□ -1.97
CPSF6-206ENST00000550987 P0C880 135 aa2.73□□□□□ -1.97
CPSF6-206ENST00000550987 RPL28P46779 137 aaKnown RBP2.73□□□□□ -1.97
CPSF6-206ENST00000550987 SUPT4H1P63272 117 aaKnown RBP2.73□□□□□ -1.97
CPSF6-206ENST00000550987 Q5BKY6 102 aa2.73□□□□□ -1.97
CPSF6-206ENST00000550987 SPANXN1Q5VSR9 72 aa2.73□□□□□ -1.97
CPSF6-206ENST00000550987 LYZL1Q6UWQ5 148 aa2.73□□□□□ -1.97
CPSF6-206ENST00000550987 C2orf91Q6ZV80 131 aa2.73□□□□□ -1.97
CPSF6-206ENST00000550987 ZNF431Q8TF32 576 aaPredicted RBP2.73□□□□□ -1.97
CPSF6-206ENST00000550987 DSCR8Q96T75 97 aa2.73□□□□□ -1.97
CPSF6-206ENST00000550987 RETNLBQ9BQ08 111 aa2.73□□□□□ -1.97
CPSF6-206ENST00000550987 SMIM7Q9BQ49 75 aa2.73□□□□□ -1.97
CPSF6-206ENST00000550987 PMCHL2Q9BQD1 86 aa2.73□□□□□ -1.97
CPSF6-206ENST00000550987 DPH3P1Q9H4G8 78 aa2.73□□□□□ -1.97
CPSF6-206ENST00000550987 ST20Q9HBF5 79 aa2.73□□□□□ -1.97
CPSF6-206ENST00000550987 IGLV10-54A0A075B6I4 117 aa2.72□□□□□ -1.97
CPSF6-206ENST00000550987 TRAV7A0A075B6U4 112 aa2.72□□□□□ -1.97
CPSF6-206ENST00000550987 TRBV10-2A0A0K0K1G8 114 aa2.72□□□□□ -1.97
CPSF6-206ENST00000550987 C19orf71A6NCJ1 209 aa2.72□□□□□ -1.97
CPSF6-206ENST00000550987 A6NN06 94 aa2.72□□□□□ -1.97
CPSF6-206ENST00000550987 G3V318 75 aa2.72□□□□□ -1.97
CPSF6-206ENST00000550987 NMBP08949 121 aa2.72□□□□□ -1.97
CPSF6-206ENST00000550987 SLC25A6P12236 298 aa2.72□□□□□ -1.97
CPSF6-206ENST00000550987 HEPN1Q6WQI6 88 aa2.72□□□□□ -1.97
CPSF6-206ENST00000550987 FP248Q71RG6 208 aaPredicted RBP2.72□□□□□ -1.97
CPSF6-206ENST00000550987 KRTAP2-1Q9BYU5 128 aa2.72□□□□□ -1.97
CPSF6-206ENST00000550987 CST11Q9H112 138 aa2.72□□□□□ -1.97
CPSF6-206ENST00000550987 C14orf132Q9NPU4 83 aa2.72□□□□□ -1.97
CPSF6-206ENST00000550987 H3BRM9 83 aa2.71□□□□□ -1.98
CPSF6-206ENST00000550987 GNRH2O43555 120 aa2.71□□□□□ -1.98
CPSF6-206ENST00000550987 IGKCP01834 107 aa2.71□□□□□ -1.98
CPSF6-206ENST00000550987 CBLN1P23435 193 aa2.71□□□□□ -1.98
CPSF6-206ENST00000550987 ESRGQ1W209 222 aa2.71□□□□□ -1.98
CPSF6-206ENST00000550987 Q8N6K4 173 aa2.71□□□□□ -1.98
CPSF6-206ENST00000550987 Q8NDZ9 215 aa2.71□□□□□ -1.98
CPSF6-206ENST00000550987 LEAP2Q969E1 77 aa2.71□□□□□ -1.98
CPSF6-206ENST00000550987 AMELYQ99218 206 aa2.71□□□□□ -1.98
CPSF6-206ENST00000550987 A6NIN4 97 aa2.7□□□□□ -1.98
CPSF6-206ENST00000550987 H7C2G1 150 aa2.7□□□□□ -1.98
CPSF6-206ENST00000550987 GNGT1P63211 74 aa2.7□□□□□ -1.98
CPSF6-206ENST00000550987 HAMPP81172 84 aa2.7□□□□□ -1.98
CPSF6-206ENST00000550987 TDRG1Q3Y452 100 aa2.7□□□□□ -1.98
CPSF6-206ENST00000550987 SPANXN5Q5MJ07 72 aa2.7□□□□□ -1.98
CPSF6-206ENST00000550987 SLC25A26Q70HW3 274 aa2.7□□□□□ -1.98
CPSF6-206ENST00000550987 Q8N8P6 123 aa2.7□□□□□ -1.98
CPSF6-206ENST00000550987 PPDPFLQ8WWR9 84 aa2.7□□□□□ -1.98
CPSF6-206ENST00000550987 CACFD1Q9UGQ2 172 aa2.7□□□□□ -1.98
CPSF6-206ENST00000550987 A0A0J9YX75 114 aa2.69□□□□□ -1.98
CPSF6-206ENST00000550987 NAP1L6A6NFF2 107 aa2.69□□□□□ -1.98
CPSF6-206ENST00000550987 NDUFC1O43677 76 aa2.69□□□□□ -1.98
CPSF6-206ENST00000550987 C1orf134Q5TEV5 83 aa2.69□□□□□ -1.98
CPSF6-206ENST00000550987 LINC01590Q5TEZ4 76 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms