RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 C2orf48Q96LS8 159 aa4.04□□□□□ -1.76
DEPDC4-209ENST00000550587 SPANXB1Q9NS25 103 aaPredicted RBP4.04□□□□□ -1.76
DEPDC4-209ENST00000550587 DNAH6Q9C0G6 4158 aa4.03□□□□□ -1.76
DEPDC4-209ENST00000550587 GVQW2A0A096LPI5 108 aaPredicted RBP4.03□□□□□ -1.76
DEPDC4-209ENST00000550587 TMEM238C9JI98 176 aa4.03□□□□□ -1.76
DEPDC4-209ENST00000550587 SPAG11BQ08648 103 aa4.03□□□□□ -1.76
DEPDC4-209ENST00000550587 HSD52Q0P140 79 aa4.03□□□□□ -1.76
DEPDC4-209ENST00000550587 SRSF9Q13242 221 aaKnown RBP eCLIP4.03□□□□□ -1.76
DEPDC4-209ENST00000550587 COX17Q14061 63 aa4.03□□□□□ -1.76
DEPDC4-209ENST00000550587 Q5VSD8 79 aa4.03□□□□□ -1.76
DEPDC4-209ENST00000550587 C2orf82Q6UX34 121 aa4.03□□□□□ -1.76
DEPDC4-209ENST00000550587 C15orf56Q8N910 161 aa4.03□□□□□ -1.76
DEPDC4-209ENST00000550587 HIST1H4GQ99525 98 aa4.03□□□□□ -1.76
DEPDC4-209ENST00000550587 LITAFQ99732 161 aa4.03□□□□□ -1.76
DEPDC4-209ENST00000550587 PKHD1P08F94 4074 aa4.02□□□□□ -1.77
DEPDC4-209ENST00000550587 USP17L23D6RBM5 183 aa4.02□□□□□ -1.77
DEPDC4-209ENST00000550587 M0R143 59 aa4.02□□□□□ -1.77
DEPDC4-209ENST00000550587 IFITM1P13164 125 aa4.02□□□□□ -1.77
DEPDC4-209ENST00000550587 ADAMTSL4-AS1Q5T5F5 129 aa4.02□□□□□ -1.77
DEPDC4-209ENST00000550587 UNQ6190/PRO20217Q6UXQ8 127 aa4.02□□□□□ -1.77
DEPDC4-209ENST00000550587 CEND1Q8N111 149 aa4.02□□□□□ -1.77
DEPDC4-209ENST00000550587 SPANXDQ9BXN6 97 aa4.02□□□□□ -1.77
DEPDC4-209ENST00000550587 SPANXCQ9NY87 97 aa4.02□□□□□ -1.77
DEPDC4-209ENST00000550587 PKD1P98161 4303 aa4.02□□□□□ -1.77
DEPDC4-209ENST00000550587 A0A087WTM6 91 aa4.01□□□□□ -1.77
DEPDC4-209ENST00000550587 IGLV5-52A0A0A0MRZ9 124 aa4.01□□□□□ -1.77
DEPDC4-209ENST00000550587 TRBV30A0A0K0K1B3 111 aa4.01□□□□□ -1.77
DEPDC4-209ENST00000550587 SMIM13P0DJ93 91 aa4.01□□□□□ -1.77
DEPDC4-209ENST00000550587 HINT1P49773 126 aaPredicted RBP4.01□□□□□ -1.77
DEPDC4-209ENST00000550587 MEIG1Q5JSS6 88 aa4.01□□□□□ -1.77
DEPDC4-209ENST00000550587 BVES-AS1Q5T3Y7 98 aa4.01□□□□□ -1.77
DEPDC4-209ENST00000550587 C10orf25Q5T742 122 aa4.01□□□□□ -1.77
DEPDC4-209ENST00000550587 Q6ZRN7 208 aaPredicted RBP4.01□□□□□ -1.77
DEPDC4-209ENST00000550587 COPS9Q8WXC6 57 aa4.01□□□□□ -1.77
DEPDC4-209ENST00000550587 LINC00526Q96FQ7 95 aa4.01□□□□□ -1.77
DEPDC4-209ENST00000550587 SNHG12Q9BXW3 62 aa4.01□□□□□ -1.77
DEPDC4-209ENST00000550587 PPDPFQ9H3Y8 114 aa4.01□□□□□ -1.77
DEPDC4-209ENST00000550587 ERG28Q9UKR5 140 aa4.01□□□□□ -1.77
DEPDC4-209ENST00000550587 FAT2Q9NYQ8 4349 aa4.01□□□□□ -1.77
DEPDC4-209ENST00000550587 LOC107984156A0A0G2JMH3 177 aa4□□□□□ -1.77
DEPDC4-209ENST00000550587 SMR3BP02814 79 aaPredicted RBP4□□□□□ -1.77
DEPDC4-209ENST00000550587 PFN2P35080 140 aa4□□□□□ -1.77
DEPDC4-209ENST00000550587 XGP55808 180 aa4□□□□□ -1.77
DEPDC4-209ENST00000550587 LINC00158P58513 81 aa4□□□□□ -1.77
DEPDC4-209ENST00000550587 SYCNQ0VAF6 134 aa4□□□□□ -1.77
DEPDC4-209ENST00000550587 HIGD2BQ4VC39 106 aa4□□□□□ -1.77
DEPDC4-209ENST00000550587 C14orf177Q52M58 125 aa4□□□□□ -1.77
DEPDC4-209ENST00000550587 LBHQ53QV2 105 aaPredicted RBP4□□□□□ -1.77
DEPDC4-209ENST00000550587 C9orf116Q5BN46 136 aaPredicted RBP4□□□□□ -1.77
DEPDC4-209ENST00000550587 MUSTN1Q8IVN3 82 aa4□□□□□ -1.77
DEPDC4-209ENST00000550587 ARL17AQ8IVW1 177 aa4□□□□□ -1.77
DEPDC4-209ENST00000550587 CAMK2N2Q96S95 79 aa4□□□□□ -1.77
DEPDC4-209ENST00000550587 DNAH2Q9P225 4427 aa4□□□□□ -1.77
DEPDC4-209ENST00000550587 A0A0U1RRA0 63 aa3.99□□□□□ -1.77
DEPDC4-209ENST00000550587 LRCOL1A6NCL2 159 aa3.99□□□□□ -1.77
DEPDC4-209ENST00000550587 A6NDN8 102 aa3.99□□□□□ -1.77
DEPDC4-209ENST00000550587 FXYD2P54710 66 aa3.99□□□□□ -1.77
DEPDC4-209ENST00000550587 RPL24P83731 157 aaKnown RBP3.99□□□□□ -1.77
DEPDC4-209ENST00000550587 KRTAP5-11Q6L8G4 156 aa3.99□□□□□ -1.77
DEPDC4-209ENST00000550587 Q6ZRU5 148 aa3.99□□□□□ -1.77
DEPDC4-209ENST00000550587 MIR7-3HGQ8N6C7 128 aa3.99□□□□□ -1.77
DEPDC4-209ENST00000550587 DAND5Q8N907 189 aa3.99□□□□□ -1.77
DEPDC4-209ENST00000550587 LINC00308Q8TCZ7 52 aa3.99□□□□□ -1.77
DEPDC4-209ENST00000550587 C6orf48Q9UBA6 75 aa3.99□□□□□ -1.77
DEPDC4-209ENST00000550587 DNAH17Q9UFH2 4485 aa3.98□□□□□ -1.77
DEPDC4-209ENST00000550587 DMBT1Q9UGM3 2413 aaPredicted RBP3.98□□□□□ -1.77
DEPDC4-209ENST00000550587 A0A1B0GWB2 263 aa3.98□□□□□ -1.77
DEPDC4-209ENST00000550587 A4D1N5 150 aa3.98□□□□□ -1.77
DEPDC4-209ENST00000550587 LECT2O14960 151 aa3.98□□□□□ -1.77
DEPDC4-209ENST00000550587 TLX1NBP0CAT3 122 aa3.98□□□□□ -1.77
DEPDC4-209ENST00000550587 FUSP35637 526 aaKnown RBP eCLIP3.98□□□□□ -1.77
DEPDC4-209ENST00000550587 KRTAP10-1P60331 282 aa3.98□□□□□ -1.77
DEPDC4-209ENST00000550587 CNBPP62633 177 aaKnown RBP3.98□□□□□ -1.77
DEPDC4-209ENST00000550587 WFDC2Q14508 124 aa3.98□□□□□ -1.77
DEPDC4-209ENST00000550587 BATFQ16520 125 aa3.98□□□□□ -1.77
DEPDC4-209ENST00000550587 COL5A1-AS1Q5SY13 56 aa3.98□□□□□ -1.77
DEPDC4-209ENST00000550587 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.97□□□□□ -1.77
DEPDC4-209ENST00000550587 NDUFC2-KCTD14E9PQ53 114 aa3.97□□□□□ -1.77
DEPDC4-209ENST00000550587 IGKV2-30P06310 120 aa3.97□□□□□ -1.77
DEPDC4-209ENST00000550587 SOSTDC1Q6X4U4 206 aa3.97□□□□□ -1.77
DEPDC4-209ENST00000550587 CARD19Q96LW7 228 aa3.97□□□□□ -1.77
DEPDC4-209ENST00000550587 SND1-IT1Q9HBX3 110 aa3.97□□□□□ -1.77
DEPDC4-209ENST00000550587 DNAH11Q96DT5 4516 aa3.97□□□□□ -1.77
DEPDC4-209ENST00000550587 CFC1BP0CG36 223 aa3.96□□□□□ -1.78
DEPDC4-209ENST00000550587 CFC1P0CG37 223 aa3.96□□□□□ -1.78
DEPDC4-209ENST00000550587 NPC2P61916 151 aa3.96□□□□□ -1.78
DEPDC4-209ENST00000550587 SERTAD4-AS1Q5TG53 156 aa3.96□□□□□ -1.78
DEPDC4-209ENST00000550587 Q8N814 137 aa3.96□□□□□ -1.78
DEPDC4-209ENST00000550587 NHP2Q9NX24 153 aaKnown RBP3.96□□□□□ -1.78
DEPDC4-209ENST00000550587 A0A0B4J2C4 111 aa3.95□□□□□ -1.78
DEPDC4-209ENST00000550587 LOC107984640A0A0U1RRK4 108 aa3.95□□□□□ -1.78
DEPDC4-209ENST00000550587 NDUFC2O95298 119 aa3.95□□□□□ -1.78
DEPDC4-209ENST00000550587 Q6ZRP5 223 aa3.95□□□□□ -1.78
DEPDC4-209ENST00000550587 C9orf163Q8N9P6 203 aa3.95□□□□□ -1.78
DEPDC4-209ENST00000550587 PRO1854Q9UHT4 67 aa3.95□□□□□ -1.78
DEPDC4-209ENST00000550587 HSPG2P98160 4391 aa3.94□□□□□ -1.78
DEPDC4-209ENST00000550587 TAX1BP3O14907 124 aa3.94□□□□□ -1.78
DEPDC4-209ENST00000550587 RAB37Q96AX2 223 aa3.94□□□□□ -1.78
DEPDC4-209ENST00000550587 PKIGQ9Y2B9 76 aa3.94□□□□□ -1.78
DEPDC4-209ENST00000550587 DYNC1H1Q14204 4646 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 182.3 ms