RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 NMUP48645 174 aa8.43□□□□□ -1.06
RAB5B-203ENST00000546810 C7orf33Q8WU49 177 aa8.43□□□□□ -1.06
RAB5B-203ENST00000546810 NDUFA12Q9UI09 145 aa8.43□□□□□ -1.06
RAB5B-203ENST00000546810 TNXBP22105 4242 aa8.42□□□□□ -1.06
RAB5B-203ENST00000546810 MEIG1Q5JSS6 88 aa8.41□□□□□ -1.06
RAB5B-203ENST00000546810 A0A1W2PNN7 141 aa8.4□□□□□ -1.06
RAB5B-203ENST00000546810 LINC00158P58513 81 aa8.4□□□□□ -1.06
RAB5B-203ENST00000546810 XAGE1AQ9HD64 81 aa8.4□□□□□ -1.06
RAB5B-203ENST00000546810 TSPEAR-AS2P59090 65 aa8.39□□□□□ -1.07
RAB5B-203ENST00000546810 C9orf129Q5T035 196 aaKnown RBP8.39□□□□□ -1.07
RAB5B-203ENST00000546810 FAM19A5Q7Z5A7 132 aaPredicted RBP8.38□□□□□ -1.07
RAB5B-203ENST00000546810 KRTAP9-2Q9BYQ4 174 aa8.38□□□□□ -1.07
RAB5B-203ENST00000546810 ATOH7Q8N100 152 aa8.37□□□□□ -1.07
RAB5B-203ENST00000546810 A0A0U1RRA0 63 aa8.36□□□□□ -1.07
RAB5B-203ENST00000546810 FAM168BA1KXE4 195 aa8.36□□□□□ -1.07
RAB5B-203ENST00000546810 HSBP1L1C9JCN9 74 aa8.36□□□□□ -1.07
RAB5B-203ENST00000546810 SCGB1D1O95968 90 aa8.36□□□□□ -1.07
RAB5B-203ENST00000546810 SMIM13P0DJ93 91 aa8.36□□□□□ -1.07
RAB5B-203ENST00000546810 SND1-IT1Q9HBX3 110 aa8.36□□□□□ -1.07
RAB5B-203ENST00000546810 TMA7Q9Y2S6 64 aaKnown RBP8.36□□□□□ -1.07
RAB5B-203ENST00000546810 M0QXV9 152 aa8.35□□□□□ -1.07
RAB5B-203ENST00000546810 LBHQ53QV2 105 aaPredicted RBP8.35□□□□□ -1.07
RAB5B-203ENST00000546810 RPL24P83731 157 aaKnown RBP8.34□□□□□ -1.07
RAB5B-203ENST00000546810 PHF5AQ7RTV0 110 aaKnown RBP8.34□□□□□ -1.07
RAB5B-203ENST00000546810 ZNF815PA8K554 130 aa8.33□□□□□ -1.08
RAB5B-203ENST00000546810 UBE2BP63146 152 aa8.33□□□□□ -1.08
RAB5B-203ENST00000546810 MIR7-3HGQ8N6C7 128 aa8.33□□□□□ -1.08
RAB5B-203ENST00000546810 NKAPP1Q8N9T2 125 aa8.33□□□□□ -1.08
RAB5B-203ENST00000546810 TP73-AS1Q9UF72 201 aa8.33□□□□□ -1.08
RAB5B-203ENST00000546810 C22orf24Q9Y442 160 aa8.33□□□□□ -1.08
RAB5B-203ENST00000546810 IGKV2D-26A0A0A0MRZ7 120 aa8.32□□□□□ -1.08
RAB5B-203ENST00000546810 A0A0J9YXY3 114 aa8.32□□□□□ -1.08
RAB5B-203ENST00000546810 ANKRD39Q53RE8 183 aa8.32□□□□□ -1.08
RAB5B-203ENST00000546810 MRPL55Q7Z7F7 128 aaKnown RBP8.31□□□□□ -1.08
RAB5B-203ENST00000546810 MIEN1Q9BRT3 115 aa8.31□□□□□ -1.08
RAB5B-203ENST00000546810 IGLV5-37A0A075B6J1 123 aa8.3□□□□□ -1.08
RAB5B-203ENST00000546810 SCGB1D4Q6XE38 83 aa8.3□□□□□ -1.08
RAB5B-203ENST00000546810 KRTAP7-1Q8IUC3 87 aa8.3□□□□□ -1.08
RAB5B-203ENST00000546810 TIMM17BO60830 172 aa8.29□□□□□ -1.08
RAB5B-203ENST00000546810 KRTAP9-6A0A140TA67 174 aa8.28□□□□□ -1.08
RAB5B-203ENST00000546810 VPREB1P12018 145 aa8.28□□□□□ -1.08
RAB5B-203ENST00000546810 PRR3P79522 188 aaKnown RBP8.28□□□□□ -1.08
RAB5B-203ENST00000546810 BOD1L2Q8IYS8 172 aa8.28□□□□□ -1.08
RAB5B-203ENST00000546810 TTTY13Q9BZ97 58 aa8.28□□□□□ -1.08
RAB5B-203ENST00000546810 JOSD1Q15040 202 aaPredicted RBP8.27□□□□□ -1.09
RAB5B-203ENST00000546810 DAND5Q8N907 189 aa8.27□□□□□ -1.09
RAB5B-203ENST00000546810 PSORS1C2Q9UIG4 136 aa8.27□□□□□ -1.09
RAB5B-203ENST00000546810 LOC107984156A0A0G2JMH3 177 aa8.26□□□□□ -1.09
RAB5B-203ENST00000546810 TMEM238C9JI98 176 aa8.26□□□□□ -1.09
RAB5B-203ENST00000546810 C1orf137Q5JT78 98 aa8.26□□□□□ -1.09
RAB5B-203ENST00000546810 ARL17AQ8IVW1 177 aa8.26□□□□□ -1.09
RAB5B-203ENST00000546810 LINC00167Q96N53 147 aa8.26□□□□□ -1.09
RAB5B-203ENST00000546810 GAGE10A6NGK3 116 aa8.25□□□□□ -1.09
RAB5B-203ENST00000546810 M0R378 163 aa8.25□□□□□ -1.09
RAB5B-203ENST00000546810 ADAMTSL4-AS1Q5T5F5 129 aa8.25□□□□□ -1.09
RAB5B-203ENST00000546810 PCP2Q8IVA1 136 aa8.25□□□□□ -1.09
RAB5B-203ENST00000546810 COPS9Q8WXC6 57 aa8.25□□□□□ -1.09
RAB5B-203ENST00000546810 LITAFQ99732 161 aa8.24□□□□□ -1.09
RAB5B-203ENST00000546810 VAMP8Q9BV40 100 aa8.24□□□□□ -1.09
RAB5B-203ENST00000546810 RPL37AP8A6NKH3 93 aa8.23□□□□□ -1.09
RAB5B-203ENST00000546810 NDUFC2O95298 119 aa8.23□□□□□ -1.09
RAB5B-203ENST00000546810 NPC2P61916 151 aa8.23□□□□□ -1.09
RAB5B-203ENST00000546810 Q6ZVH6 145 aa8.23□□□□□ -1.09
RAB5B-203ENST00000546810 LINC01600Q96MT4 127 aa8.23□□□□□ -1.09
RAB5B-203ENST00000546810 S100A12P80511 92 aa8.22□□□□□ -1.09
RAB5B-203ENST00000546810 Q8NDZ9 215 aa8.22□□□□□ -1.09
RAB5B-203ENST00000546810 LINC00308Q8TCZ7 52 aa8.22□□□□□ -1.09
RAB5B-203ENST00000546810 SPANXDQ9BXN6 97 aa8.22□□□□□ -1.09
RAB5B-203ENST00000546810 SPANXCQ9NY87 97 aa8.22□□□□□ -1.09
RAB5B-203ENST00000546810 IGLV1-50A0A075B6I6 118 aa8.21□□□□□ -1.1
RAB5B-203ENST00000546810 IGKV2-28A0A075B6P5 120 aa8.21□□□□□ -1.1
RAB5B-203ENST00000546810 TRBV10-2A0A0K0K1G8 114 aa8.21□□□□□ -1.1
RAB5B-203ENST00000546810 NCR3O14931 201 aa8.21□□□□□ -1.1
RAB5B-203ENST00000546810 IGKV2D-28P01615 120 aa8.21□□□□□ -1.1
RAB5B-203ENST00000546810 IFITM1P13164 125 aa8.21□□□□□ -1.1
RAB5B-203ENST00000546810 SPATA45Q537H7 98 aa8.21□□□□□ -1.1
RAB5B-203ENST00000546810 KRTAP11-1Q8IUC1 163 aa8.21□□□□□ -1.1
RAB5B-203ENST00000546810 SPANXB1Q9NS25 103 aaPredicted RBP8.21□□□□□ -1.1
RAB5B-203ENST00000546810 PAM16Q9Y3D7 125 aa8.21□□□□□ -1.1
RAB5B-203ENST00000546810 IGLV7-43P04211 117 aa8.2□□□□□ -1.1
RAB5B-203ENST00000546810 COX8AP10176 69 aa8.2□□□□□ -1.1
RAB5B-203ENST00000546810 SPINK6Q6UWN8 80 aa8.2□□□□□ -1.1
RAB5B-203ENST00000546810 SOSTDC1Q6X4U4 206 aa8.2□□□□□ -1.1
RAB5B-203ENST00000546810 DLEU1O43261 78 aa8.18□□□□□ -1.1
RAB5B-203ENST00000546810 BCE1O60756 84 aa8.18□□□□□ -1.1
RAB5B-203ENST00000546810 SRSF9Q13242 221 aaKnown RBP eCLIP8.18□□□□□ -1.1
RAB5B-203ENST00000546810 PYY3Q5JQD4 70 aa8.18□□□□□ -1.1
RAB5B-203ENST00000546810 S100A7L2Q5SY68 101 aa8.18□□□□□ -1.1
RAB5B-203ENST00000546810 REG3GQ6UW15 175 aa8.18□□□□□ -1.1
RAB5B-203ENST00000546810 PPDPFQ9H3Y8 114 aa8.18□□□□□ -1.1
RAB5B-203ENST00000546810 LINC00518Q8N0U6 118 aa8.17□□□□□ -1.1
RAB5B-203ENST00000546810 CBY1Q9Y3M2 126 aa8.17□□□□□ -1.1
RAB5B-203ENST00000546810 FAT4Q6V0I7 4981 aa8.17□□□□□ -1.1
RAB5B-203ENST00000546810 PRYO14603 147 aa8.16□□□□□ -1.1
RAB5B-203ENST00000546810 DDTP30046 118 aa8.16□□□□□ -1.1
RAB5B-203ENST00000546810 RPL28P46779 137 aaKnown RBP8.16□□□□□ -1.1
RAB5B-203ENST00000546810 UBE2AP49459 152 aa8.16□□□□□ -1.1
RAB5B-203ENST00000546810 DIRC1Q969H9 104 aa8.16□□□□□ -1.1
RAB5B-203ENST00000546810 C14orf144Q96I85 54 aa8.16□□□□□ -1.1
RAB5B-203ENST00000546810 TMEM126AQ9H061 195 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms