RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 LBHQ53QV2 105 aaPredicted RBP7.26□□□□□ -1.25
YBX3-217ENST00000546164 ZNF625Q96I27 306 aaPredicted RBP7.26□□□□□ -1.25
YBX3-217ENST00000546164 IGLV5-37A0A075B6J1 123 aa7.25□□□□□ -1.25
YBX3-217ENST00000546164 HSPB8Q9UJY1 196 aa7.25□□□□□ -1.25
YBX3-217ENST00000546164 ERG28Q9UKR5 140 aa7.25□□□□□ -1.25
YBX3-217ENST00000546164 MRPL55Q7Z7F7 128 aaKnown RBP7.24□□□□□ -1.25
YBX3-217ENST00000546164 HIST1H2BKO60814 126 aa7.23□□□□□ -1.25
YBX3-217ENST00000546164 HIST1H2BJP06899 126 aa7.23□□□□□ -1.25
YBX3-217ENST00000546164 HIST1H2BOP23527 126 aa7.23□□□□□ -1.25
YBX3-217ENST00000546164 HIST1H2BBP33778 126 aa7.23□□□□□ -1.25
YBX3-217ENST00000546164 PFN2P35080 140 aa7.23□□□□□ -1.25
YBX3-217ENST00000546164 HIST1H2BDP58876 126 aa7.23□□□□□ -1.25
YBX3-217ENST00000546164 HIST1H2BCP62807 126 aa7.23□□□□□ -1.25
YBX3-217ENST00000546164 HIST2H2BEQ16778 126 aa7.23□□□□□ -1.25
YBX3-217ENST00000546164 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.23□□□□□ -1.25
YBX3-217ENST00000546164 HIST1H2BHQ93079 126 aa7.23□□□□□ -1.25
YBX3-217ENST00000546164 DIRC1Q969H9 104 aa7.23□□□□□ -1.25
YBX3-217ENST00000546164 HIST1H2BNQ99877 126 aa7.23□□□□□ -1.25
YBX3-217ENST00000546164 HIST1H2BMQ99879 126 aa7.23□□□□□ -1.25
YBX3-217ENST00000546164 PLNP26678 52 aa7.22□□□□□ -1.25
YBX3-217ENST00000546164 SND1-IT1Q9HBX3 110 aa7.22□□□□□ -1.25
YBX3-217ENST00000546164 H0Y8G0 127 aa7.21□□□□□ -1.26
YBX3-217ENST00000546164 H0Y9J4 135 aa7.21□□□□□ -1.26
YBX3-217ENST00000546164 FABP4P15090 132 aa7.21□□□□□ -1.26
YBX3-217ENST00000546164 KRTAP10-8P60410 259 aa7.21□□□□□ -1.26
YBX3-217ENST00000546164 DPM2O94777 84 aa7.2□□□□□ -1.26
YBX3-217ENST00000546164 NKAPP1Q8N9T2 125 aa7.2□□□□□ -1.26
YBX3-217ENST00000546164 LINC00167Q96N53 147 aa7.2□□□□□ -1.26
YBX3-217ENST00000546164 VPREB1P12018 145 aa7.19□□□□□ -1.26
YBX3-217ENST00000546164 HERV-K104P63124 156 aa7.19□□□□□ -1.26
YBX3-217ENST00000546164 MAP1LC3CQ9BXW4 147 aa7.19□□□□□ -1.26
YBX3-217ENST00000546164 ZNF861PO60384 105 aa7.18□□□□□ -1.26
YBX3-217ENST00000546164 RPL24P83731 157 aaKnown RBP7.18□□□□□ -1.26
YBX3-217ENST00000546164 COA6Q5JTJ3 125 aaKnown RBP7.18□□□□□ -1.26
YBX3-217ENST00000546164 NDUFA12Q9UI09 145 aa7.18□□□□□ -1.26
YBX3-217ENST00000546164 LINC00587B1AMM8 73 aa7.17□□□□□ -1.26
YBX3-217ENST00000546164 LEPROTO15243 131 aa7.17□□□□□ -1.26
YBX3-217ENST00000546164 BCE1O60756 84 aa7.17□□□□□ -1.26
YBX3-217ENST00000546164 IGKCP01834 107 aa7.17□□□□□ -1.26
YBX3-217ENST00000546164 LINC00158P58513 81 aa7.17□□□□□ -1.26
YBX3-217ENST00000546164 PLEKHB2Q96CS7 222 aa7.17□□□□□ -1.26
YBX3-217ENST00000546164 MYMXA0A1B0GTQ4 84 aa7.16□□□□□ -1.26
YBX3-217ENST00000546164 GAGE10A6NGK3 116 aa7.16□□□□□ -1.26
YBX3-217ENST00000546164 RPL37AP8A6NKH3 93 aa7.16□□□□□ -1.26
YBX3-217ENST00000546164 SYS1-DBNDD2H3BUS1 97 aa7.16□□□□□ -1.26
YBX3-217ENST00000546164 KRTAP1-4P0C5Y4 121 aa7.16□□□□□ -1.26
YBX3-217ENST00000546164 TSPEAR-AS2P59090 65 aa7.16□□□□□ -1.26
YBX3-217ENST00000546164 HERVK_113P61574 105 aa7.16□□□□□ -1.26
YBX3-217ENST00000546164 Q8NDZ9 215 aa7.16□□□□□ -1.26
YBX3-217ENST00000546164 PMCHL2Q9BQD1 86 aa7.16□□□□□ -1.26
YBX3-217ENST00000546164 IGLV1-50A0A075B6I6 118 aa7.15□□□□□ -1.26
YBX3-217ENST00000546164 J3QQQ9 107 aa7.15□□□□□ -1.26
YBX3-217ENST00000546164 SMIM13P0DJ93 91 aa7.15□□□□□ -1.26
YBX3-217ENST00000546164 RPL28P46779 137 aaKnown RBP7.15□□□□□ -1.26
YBX3-217ENST00000546164 MEIG1Q5JSS6 88 aa7.15□□□□□ -1.26
YBX3-217ENST00000546164 A0A0U1RRA0 63 aa7.14□□□□□ -1.27
YBX3-217ENST00000546164 NMUP48645 174 aa7.14□□□□□ -1.27
YBX3-217ENST00000546164 KRTAP13-1Q8IUC0 172 aa7.14□□□□□ -1.27
YBX3-217ENST00000546164 MIR7-3HGQ8N6C7 128 aa7.14□□□□□ -1.27
YBX3-217ENST00000546164 IGKV2-28A0A075B6P5 120 aa7.13□□□□□ -1.27
YBX3-217ENST00000546164 ATP6V1G1O75348 118 aa7.13□□□□□ -1.27
YBX3-217ENST00000546164 IGKV2D-28P01615 120 aa7.13□□□□□ -1.27
YBX3-217ENST00000546164 LINC01545Q5VT33 79 aa7.13□□□□□ -1.27
YBX3-217ENST00000546164 PET117Q6UWS5 81 aa7.13□□□□□ -1.27
YBX3-217ENST00000546164 LOC107984156A0A0G2JMH3 177 aa7.12□□□□□ -1.27
YBX3-217ENST00000546164 E9PLD3 99 aa7.12□□□□□ -1.27
YBX3-217ENST00000546164 S100A1P23297 94 aa7.12□□□□□ -1.27
YBX3-217ENST00000546164 ARL17AQ8IVW1 177 aa7.12□□□□□ -1.27
YBX3-217ENST00000546164 PRR26Q8N8Z3 221 aa7.12□□□□□ -1.27
YBX3-217ENST00000546164 M0R378 163 aa7.11□□□□□ -1.27
YBX3-217ENST00000546164 LGALS3P17931 250 aaKnown RBP7.11□□□□□ -1.27
YBX3-217ENST00000546164 BOD1L2Q8IYS8 172 aa7.11□□□□□ -1.27
YBX3-217ENST00000546164 TMEM126AQ9H061 195 aa7.11□□□□□ -1.27
YBX3-217ENST00000546164 UBR4Q5T4S7 5183 aa7.1□□□□□ -1.27
YBX3-217ENST00000546164 LRP2P98164 4655 aa7.1□□□□□ -1.27
YBX3-217ENST00000546164 IGKV2D-26A0A0A0MRZ7 120 aa7.1□□□□□ -1.27
YBX3-217ENST00000546164 TMEM238C9JI98 176 aa7.09□□□□□ -1.27
YBX3-217ENST00000546164 C3orf79P0CE67 100 aa7.09□□□□□ -1.27
YBX3-217ENST00000546164 RPL13AP40429 203 aaKnown RBP7.09□□□□□ -1.27
YBX3-217ENST00000546164 UBE2AP49459 152 aa7.09□□□□□ -1.27
YBX3-217ENST00000546164 A0A0J9YXY3 114 aa7.07□□□□□ -1.28
YBX3-217ENST00000546164 DAND5Q8N907 189 aa7.07□□□□□ -1.28
YBX3-217ENST00000546164 PRYO14603 147 aa7.06□□□□□ -1.28
YBX3-217ENST00000546164 KRTDAPP60985 99 aa7.06□□□□□ -1.28
YBX3-217ENST00000546164 PRLHP81277 87 aa7.06□□□□□ -1.28
YBX3-217ENST00000546164 FAM19A1Q7Z5A9 133 aa7.06□□□□□ -1.28
YBX3-217ENST00000546164 TRBV10-2A0A0K0K1G8 114 aa7.05□□□□□ -1.28
YBX3-217ENST00000546164 NCR3O14931 201 aa7.05□□□□□ -1.28
YBX3-217ENST00000546164 NDUFC2O95298 119 aa7.05□□□□□ -1.28
YBX3-217ENST00000546164 SPRR1AP35321 89 aa7.05□□□□□ -1.28
YBX3-217ENST00000546164 MIEN1Q9BRT3 115 aa7.05□□□□□ -1.28
YBX3-217ENST00000546164 KRTAP4-11Q9BYQ6 195 aa7.05□□□□□ -1.28
YBX3-217ENST00000546164 KCNQ1DNQ9H478 68 aa7.05□□□□□ -1.28
YBX3-217ENST00000546164 TRBV10-3A0A0K0K1G6 114 aa7.04□□□□□ -1.28
YBX3-217ENST00000546164 C20orf202A1L168 122 aa7.04□□□□□ -1.28
YBX3-217ENST00000546164 ADAMTSL4-AS1Q5T5F5 129 aa7.04□□□□□ -1.28
YBX3-217ENST00000546164 LINC00337Q8N6G1 96 aa7.04□□□□□ -1.28
YBX3-217ENST00000546164 SPANXB1Q9NS25 103 aaPredicted RBP7.04□□□□□ -1.28
YBX3-217ENST00000546164 A0A087X002 238 aa7.03□□□□□ -1.28
YBX3-217ENST00000546164 KRTAP4-16G5E9R7 235 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms