RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 SCXQ7RTU7 201 aa4.39□□□□□ -1.71
LDHA-223ENST00000545215 KIR2DL4Q99706 377 aa4.39□□□□□ -1.71
LDHA-223ENST00000545215 UPK3BQ9BT76 320 aa4.39□□□□□ -1.71
LDHA-223ENST00000545215 HIGD1BQ9P298 99 aa4.39□□□□□ -1.71
LDHA-223ENST00000545215 A0A087X002 238 aa4.38□□□□□ -1.71
LDHA-223ENST00000545215 TRAV26-2A0A0B4J265 109 aa4.38□□□□□ -1.71
LDHA-223ENST00000545215 SDHAF1A6NFY7 115 aa4.38□□□□□ -1.71
LDHA-223ENST00000545215 LINC01549A6NIU2 74 aa4.38□□□□□ -1.71
LDHA-223ENST00000545215 E9PLD3 99 aa4.38□□□□□ -1.71
LDHA-223ENST00000545215 I3L3M4 83 aa4.38□□□□□ -1.71
LDHA-223ENST00000545215 ATP5LO75964 103 aa4.38□□□□□ -1.71
LDHA-223ENST00000545215 POLR2KP53803 58 aaKnown RBP4.38□□□□□ -1.71
LDHA-223ENST00000545215 TAL2Q16559 108 aa4.38□□□□□ -1.71
LDHA-223ENST00000545215 C9orf153Q5TBE3 101 aa4.38□□□□□ -1.71
LDHA-223ENST00000545215 NOTCH2NLQ7Z3S9 236 aa4.38□□□□□ -1.71
LDHA-223ENST00000545215 CHCHD7Q9BUK0 85 aa4.38□□□□□ -1.71
LDHA-223ENST00000545215 NXT2Q9NPJ8 142 aaKnown RBP4.38□□□□□ -1.71
LDHA-223ENST00000545215 TRBV25-1A0A075B6N4 114 aa4.37□□□□□ -1.71
LDHA-223ENST00000545215 TRBV6-8A0A0A6YYG3 113 aa4.37□□□□□ -1.71
LDHA-223ENST00000545215 IGHV1-24A0A0C4DH33 117 aa4.37□□□□□ -1.71
LDHA-223ENST00000545215 LOC100131303A0A0U1RQF7 123 aa4.37□□□□□ -1.71
LDHA-223ENST00000545215 H7C423 109 aa4.37□□□□□ -1.71
LDHA-223ENST00000545215 UQCRQO14949 82 aa4.37□□□□□ -1.71
LDHA-223ENST00000545215 LEPROTL1O95214 131 aa4.37□□□□□ -1.71
LDHA-223ENST00000545215 FCER1GP30273 86 aa4.37□□□□□ -1.71
LDHA-223ENST00000545215 RPL37AP61513 92 aaKnown RBP4.37□□□□□ -1.71
LDHA-223ENST00000545215 LYPD5Q6UWN5 251 aa4.37□□□□□ -1.71
LDHA-223ENST00000545215 TEN1Q86WV5 123 aa4.37□□□□□ -1.71
LDHA-223ENST00000545215 C10orf126Q8N4M7 172 aa4.37□□□□□ -1.71
LDHA-223ENST00000545215 RPL39LQ96EH5 51 aaKnown RBP4.37□□□□□ -1.71
LDHA-223ENST00000545215 NAA38Q9BRA0 125 aaKnown RBP4.37□□□□□ -1.71
LDHA-223ENST00000545215 SMIM2Q9BVW6 85 aa4.37□□□□□ -1.71
LDHA-223ENST00000545215 SMKR1H3BMG3 65 aa4.36□□□□□ -1.71
LDHA-223ENST00000545215 NPYP01303 97 aa4.36□□□□□ -1.71
LDHA-223ENST00000545215 TMEM258P61165 79 aa4.36□□□□□ -1.71
LDHA-223ENST00000545215 ORMDL2Q53FV1 153 aa4.36□□□□□ -1.71
LDHA-223ENST00000545215 LINC01545Q5VT33 79 aa4.36□□□□□ -1.71
LDHA-223ENST00000545215 FAM19A2Q8N3H0 131 aa4.36□□□□□ -1.71
LDHA-223ENST00000545215 LINC01600Q96MT4 127 aa4.36□□□□□ -1.71
LDHA-223ENST00000545215 PRO0461Q9UI25 63 aa4.36□□□□□ -1.71
LDHA-223ENST00000545215 C3orf22Q8N5N4 141 aa4.35□□□□□ -1.71
LDHA-223ENST00000545215 Q8N8P6 123 aa4.35□□□□□ -1.71
LDHA-223ENST00000545215 TMEM243Q9BU79 118 aa4.35□□□□□ -1.71
LDHA-223ENST00000545215 IMUPQ9GZP8 106 aa4.35□□□□□ -1.71
LDHA-223ENST00000545215 TRBV20-1A0A075B6N2 111 aa4.34□□□□□ -1.71
LDHA-223ENST00000545215 UBE2L6O14933 153 aa4.34□□□□□ -1.71
LDHA-223ENST00000545215 DPM2O94777 84 aa4.34□□□□□ -1.71
LDHA-223ENST00000545215 FGF6P10767 208 aa4.34□□□□□ -1.71
LDHA-223ENST00000545215 HERVK_113P63121 156 aa4.34□□□□□ -1.71
LDHA-223ENST00000545215 LINC01556Q5JQF7 62 aa4.34□□□□□ -1.71
LDHA-223ENST00000545215 BAALCQ8WXS3 180 aa4.34□□□□□ -1.71
LDHA-223ENST00000545215 LINC00526Q96FQ7 95 aa4.34□□□□□ -1.71
LDHA-223ENST00000545215 Q9UF83 564 aa4.34□□□□□ -1.71
LDHA-223ENST00000545215 LINC01546A6NGU7 62 aa4.33□□□□□ -1.72
LDHA-223ENST00000545215 KRTAP10-8P60410 259 aa4.33□□□□□ -1.72
LDHA-223ENST00000545215 LAGE3Q14657 143 aa4.33□□□□□ -1.72
LDHA-223ENST00000545215 C1orf195Q5TG92 126 aa4.33□□□□□ -1.72
LDHA-223ENST00000545215 PLEKHB2Q96CS7 222 aa4.33□□□□□ -1.72
LDHA-223ENST00000545215 LITAFQ99732 161 aa4.33□□□□□ -1.72
LDHA-223ENST00000545215 CHCHD5Q9BSY4 110 aa4.33□□□□□ -1.72
LDHA-223ENST00000545215 TIMM21Q9BVV7 248 aa4.33□□□□□ -1.72
LDHA-223ENST00000545215 LOC107984640A0A0U1RRK4 108 aa4.32□□□□□ -1.72
LDHA-223ENST00000545215 LOC389332A0A1B0GUA5 103 aa4.32□□□□□ -1.72
LDHA-223ENST00000545215 SCGB1C2P0DMR2 95 aa4.32□□□□□ -1.72
LDHA-223ENST00000545215 NMUP48645 174 aa4.32□□□□□ -1.72
LDHA-223ENST00000545215 LINC00242Q5T6M2 205 aa4.32□□□□□ -1.72
LDHA-223ENST00000545215 NTM-AS1Q6ZSK4 140 aa4.32□□□□□ -1.72
LDHA-223ENST00000545215 C20orf203Q8NBC4 194 aa4.32□□□□□ -1.72
LDHA-223ENST00000545215 CIRBP-AS1Q8TBR5 109 aa4.32□□□□□ -1.72
LDHA-223ENST00000545215 CHAC1Q9BUX1 264 aa4.32□□□□□ -1.72
LDHA-223ENST00000545215 NDUFC2O95298 119 aa4.31□□□□□ -1.72
LDHA-223ENST00000545215 TRACP01848 142 aa4.31□□□□□ -1.72
LDHA-223ENST00000545215 CRYGAP11844 174 aa4.31□□□□□ -1.72
LDHA-223ENST00000545215 IFI27P40305 119 aaPredicted RBP4.31□□□□□ -1.72
LDHA-223ENST00000545215 WFDC10BQ8IUB3 73 aa4.31□□□□□ -1.72
LDHA-223ENST00000545215 CEND1Q8N111 149 aa4.31□□□□□ -1.72
LDHA-223ENST00000545215 ANKRD29Q8N6D5 301 aa4.31□□□□□ -1.72
LDHA-223ENST00000545215 TRAV8-3A0A0A6YYJ7 113 aa4.3□□□□□ -1.72
LDHA-223ENST00000545215 TRAV8-4A0A0B4J246 113 aa4.3□□□□□ -1.72
LDHA-223ENST00000545215 TRBV7-7A0A0K0K1E9 115 aa4.3□□□□□ -1.72
LDHA-223ENST00000545215 FAM240AA0A1B0GVK7 77 aa4.3□□□□□ -1.72
LDHA-223ENST00000545215 HRCT1Q6UXD1 115 aa4.3□□□□□ -1.72
LDHA-223ENST00000545215 C2orf66Q6UXQ4 117 aa4.3□□□□□ -1.72
LDHA-223ENST00000545215 COPS9Q8WXC6 57 aa4.3□□□□□ -1.72
LDHA-223ENST00000545215 RMI2Q96E14 147 aa4.3□□□□□ -1.72
LDHA-223ENST00000545215 TMEM141Q96I45 108 aa4.3□□□□□ -1.72
LDHA-223ENST00000545215 TIMM17AQ99595 171 aa4.3□□□□□ -1.72
LDHA-223ENST00000545215 NHP2Q9NX24 153 aaKnown RBP4.3□□□□□ -1.72
LDHA-223ENST00000545215 FCGBPQ9Y6R7 5405 aaPredicted RBP4.3□□□□□ -1.72
LDHA-223ENST00000545215 SYNE2Q8WXH0 6885 aaKnown RBP4.29□□□□□ -1.72
LDHA-223ENST00000545215 HBDP02042 147 aa4.29□□□□□ -1.72
LDHA-223ENST00000545215 CRPP02741 224 aa4.29□□□□□ -1.72
LDHA-223ENST00000545215 MRPS36P82909 103 aaKnown RBP4.29□□□□□ -1.72
LDHA-223ENST00000545215 TOMM6Q96B49 74 aa4.29□□□□□ -1.72
LDHA-223ENST00000545215 UBE2D4Q9Y2X8 147 aa4.29□□□□□ -1.72
LDHA-223ENST00000545215 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.28□□□□□ -1.72
LDHA-223ENST00000545215 A0A0J9YXV3 536 aa4.28□□□□□ -1.72
LDHA-223ENST00000545215 IGKV2-29A2NJV5 120 aaPredicted RBP4.28□□□□□ -1.72
LDHA-223ENST00000545215 LRCOL1A6NCL2 159 aa4.28□□□□□ -1.72
LDHA-223ENST00000545215 IBA57-AS1B1ANH7 110 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms