RNA–Protein interactions for RNA: ENST00000544396.5

GRAMD2B-219, Transcript of GRAM domain containing 2B, humanhuman

TSL 2 BASIC

Gene GRAMD2B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-219ENST00000544396 UBR5O95071 2799 aaPredicted RBP12.96□□□□□ -0.33
GRAMD2B-219ENST00000544396 TENM4Q6N022 2769 aa12.96□□□□□ -0.33
GRAMD2B-219ENST00000544396 NOTCH2Q04721 2471 aa12.95□□□□□ -0.34
GRAMD2B-219ENST00000544396 TRBV10-3A0A0K0K1G6 114 aa12.94□□□□□ -0.34
GRAMD2B-219ENST00000544396 LINC00482Q8N8I6 264 aa12.94□□□□□ -0.34
GRAMD2B-219ENST00000544396 SPATA3Q8NHX4 192 aa12.94□□□□□ -0.34
GRAMD2B-219ENST00000544396 HAMPP81172 84 aa12.94□□□□□ -0.34
GRAMD2B-219ENST00000544396 KIAA0087Q14695 138 aa12.94□□□□□ -0.34
GRAMD2B-219ENST00000544396 FAM229BQ4G0N7 80 aa12.94□□□□□ -0.34
GRAMD2B-219ENST00000544396 LINC00269Q8N2A0 174 aa12.94□□□□□ -0.34
GRAMD2B-219ENST00000544396 DNAJC9-AS1A6NH13 148 aa12.94□□□□□ -0.34
GRAMD2B-219ENST00000544396 HELZ2Q9BYK8 2649 aaKnown RBP12.93□□□□□ -0.34
GRAMD2B-219ENST00000544396 ESM1Q9NQ30 184 aa12.93□□□□□ -0.34
GRAMD2B-219ENST00000544396 MTORP42345 2549 aa12.92□□□□□ -0.34
GRAMD2B-219ENST00000544396 ITPR2Q14571 2701 aa12.91□□□□□ -0.34
GRAMD2B-219ENST00000544396 ITPR3Q14573 2671 aa12.91□□□□□ -0.34
GRAMD2B-219ENST00000544396 LINC01547P58512 204 aaPredicted RBP12.9□□□□□ -0.34
GRAMD2B-219ENST00000544396 TM2D3Q9BRN9 247 aa12.9□□□□□ -0.34
GRAMD2B-219ENST00000544396 LINC00575Q6W349 94 aa12.89□□□□□ -0.35
GRAMD2B-219ENST00000544396 A0A1B0GUV1 79 aa12.89□□□□□ -0.35
GRAMD2B-219ENST00000544396 Q6ZQT0 140 aa12.89□□□□□ -0.35
GRAMD2B-219ENST00000544396 IGLV1-51P01701 117 aa12.88□□□□□ -0.35
GRAMD2B-219ENST00000544396 CHCHD10Q8WYQ3 142 aaPredicted RBP12.88□□□□□ -0.35
GRAMD2B-219ENST00000544396 LAMTOR3Q9UHA4 124 aa12.88□□□□□ -0.35
GRAMD2B-219ENST00000544396 C10orf25Q5T742 122 aa12.87□□□□□ -0.35
GRAMD2B-219ENST00000544396 C6orf223Q8N319 242 aa12.87□□□□□ -0.35
GRAMD2B-219ENST00000544396 DEFB113Q30KQ7 82 aa12.85□□□□□ -0.35
GRAMD2B-219ENST00000544396 CD164L2Q6UWJ8 174 aa12.85□□□□□ -0.35
GRAMD2B-219ENST00000544396 SCXQ7RTU7 201 aa12.85□□□□□ -0.35
GRAMD2B-219ENST00000544396 LINC01006Q8NI28 216 aa12.85□□□□□ -0.35
GRAMD2B-219ENST00000544396 FLNAP21333 2647 aaKnown RBP12.85□□□□□ -0.35
GRAMD2B-219ENST00000544396 BCE1O60756 84 aa12.84□□□□□ -0.35
GRAMD2B-219ENST00000544396 ANGP03950 147 aaKnown RBP12.84□□□□□ -0.35
GRAMD2B-219ENST00000544396 CMC4P56277 68 aaPredicted RBP12.84□□□□□ -0.35
GRAMD2B-219ENST00000544396 UNQ6190/PRO20217Q6UXQ8 127 aa12.84□□□□□ -0.35
GRAMD2B-219ENST00000544396 Q6ZVQ6 151 aa12.84□□□□□ -0.35
GRAMD2B-219ENST00000544396 MIFP14174 115 aa12.84□□□□□ -0.35
GRAMD2B-219ENST00000544396 ZNF843Q8N446 348 aa12.84□□□□□ -0.35
GRAMD2B-219ENST00000544396 COX17Q14061 63 aa12.83□□□□□ -0.36
GRAMD2B-219ENST00000544396 DEFB4AO15263 64 aa12.82□□□□□ -0.36
GRAMD2B-219ENST00000544396 HECTD1Q9ULT8 2610 aa12.81□□□□□ -0.36
GRAMD2B-219ENST00000544396 TRBV7-4A0A0J9YYF1 115 aa12.81□□□□□ -0.36
GRAMD2B-219ENST00000544396 ZNF561-AS1K7EIQ3 104 aa12.81□□□□□ -0.36
GRAMD2B-219ENST00000544396 REG3AQ06141 175 aa12.81□□□□□ -0.36
GRAMD2B-219ENST00000544396 Q6ZQY7 126 aa12.81□□□□□ -0.36
GRAMD2B-219ENST00000544396 IGHV4-28A0A0C4DH34 117 aa12.8□□□□□ -0.36
GRAMD2B-219ENST00000544396 KRTAP1-3Q8IUG1 177 aa12.8□□□□□ -0.36
GRAMD2B-219ENST00000544396 PRO0255Q9UI72 69 aa12.8□□□□□ -0.36
GRAMD2B-219ENST00000544396 FASNP49327 2511 aaKnown RBP12.79□□□□□ -0.36
GRAMD2B-219ENST00000544396 LINC00612Q8N6U2 182 aa12.79□□□□□ -0.36
GRAMD2B-219ENST00000544396 LOC110117498A0A087WWA1 95 aa12.78□□□□□ -0.36
GRAMD2B-219ENST00000544396 NDUFC1O43677 76 aa12.78□□□□□ -0.36
GRAMD2B-219ENST00000544396 X6R8D5 127 aa12.77□□□□□ -0.37
GRAMD2B-219ENST00000544396 TMEM254Q8TBM7 123 aa12.76□□□□□ -0.37
GRAMD2B-219ENST00000544396 ATP5EP56381 51 aaPredicted RBP12.75□□□□□ -0.37
GRAMD2B-219ENST00000544396 NREPQ16612 68 aa12.75□□□□□ -0.37
GRAMD2B-219ENST00000544396 SPAG11BQ08648 103 aa12.75□□□□□ -0.37
GRAMD2B-219ENST00000544396 CYSRT1A8MQ03 144 aa12.74□□□□□ -0.37
GRAMD2B-219ENST00000544396 IGLV6-57P01721 117 aa12.73□□□□□ -0.37
GRAMD2B-219ENST00000544396 XAGE1AQ9HD64 81 aa12.73□□□□□ -0.37
GRAMD2B-219ENST00000544396 MUC7Q8TAX7 377 aa12.71□□□□□ -0.37
GRAMD2B-219ENST00000544396 CXCL6P80162 114 aa12.7□□□□□ -0.38
GRAMD2B-219ENST00000544396 ESRGQ1W209 222 aa12.7□□□□□ -0.38
GRAMD2B-219ENST00000544396 VWFP04275 2813 aa12.69□□□□□ -0.38
GRAMD2B-219ENST00000544396 LRCOL1A6NCL2 159 aa12.68□□□□□ -0.38
GRAMD2B-219ENST00000544396 BPY2O14599 106 aa12.68□□□□□ -0.38
GRAMD2B-219ENST00000544396 Q8N9L7 120 aa12.68□□□□□ -0.38
GRAMD2B-219ENST00000544396 C9orf66Q5T8R8 295 aa12.66□□□□□ -0.38
GRAMD2B-219ENST00000544396 HIVEP2P31629 2446 aa12.66□□□□□ -0.38
GRAMD2B-219ENST00000544396 FUSP35637 526 aaKnown RBP eCLIP12.66□□□□□ -0.38
GRAMD2B-219ENST00000544396 PMAIP1Q13794 54 aa12.66□□□□□ -0.38
GRAMD2B-219ENST00000544396 KLK12Q9UKR0 248 aa12.66□□□□□ -0.38
GRAMD2B-219ENST00000544396 DEFB135Q30KP9 77 aa12.66□□□□□ -0.38
GRAMD2B-219ENST00000544396 A0A0J9YWU9 116 aa12.65□□□□□ -0.38
GRAMD2B-219ENST00000544396 IGHV4-30-4P0DP06 118 aa12.65□□□□□ -0.38
GRAMD2B-219ENST00000544396 UNC79Q9P2D8 2635 aa12.65□□□□□ -0.38
GRAMD2B-219ENST00000544396 PRYO14603 147 aa12.65□□□□□ -0.38
GRAMD2B-219ENST00000544396 HTN3P15516 51 aa12.65□□□□□ -0.38
GRAMD2B-219ENST00000544396 DAD1P61803 113 aa12.65□□□□□ -0.38
GRAMD2B-219ENST00000544396 DIRC1Q969H9 104 aa12.64□□□□□ -0.39
GRAMD2B-219ENST00000544396 C6orf48Q9UBA6 75 aa12.64□□□□□ -0.39
GRAMD2B-219ENST00000544396 CELA1Q9UNI1 258 aa12.63□□□□□ -0.39
GRAMD2B-219ENST00000544396 ZNF73O43830 326 aaPredicted RBP12.62□□□□□ -0.39
GRAMD2B-219ENST00000544396 Q6ZTC4 211 aa12.62□□□□□ -0.39
GRAMD2B-219ENST00000544396 PDE6GP18545 87 aa12.61□□□□□ -0.39
GRAMD2B-219ENST00000544396 HIGD2AQ9BW72 106 aa12.61□□□□□ -0.39
GRAMD2B-219ENST00000544396 ANK3Q12955 4377 aaKnown RBP12.61□□□□□ -0.39
GRAMD2B-219ENST00000544396 COX7BP24311 80 aa12.61□□□□□ -0.39
GRAMD2B-219ENST00000544396 KRTAP10-3P60369 221 aa12.61□□□□□ -0.39
GRAMD2B-219ENST00000544396 LYRM9A8MSI8 78 aa12.59□□□□□ -0.39
GRAMD2B-219ENST00000544396 PRR15Q8IV56 129 aa12.59□□□□□ -0.39
GRAMD2B-219ENST00000544396 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.59□□□□□ -0.39
GRAMD2B-219ENST00000544396 PDZD2O15018 2839 aa12.58□□□□□ -0.39
GRAMD2B-219ENST00000544396 HIGD2BQ4VC39 106 aa12.57□□□□□ -0.4
GRAMD2B-219ENST00000544396 ELOF1P60002 83 aaKnown RBP12.56□□□□□ -0.4
GRAMD2B-219ENST00000544396 KRTAP1-1Q07627 177 aa12.56□□□□□ -0.4
GRAMD2B-219ENST00000544396 ERC2-IT1O76042 136 aa12.54□□□□□ -0.4
GRAMD2B-219ENST00000544396 PRR34Q9NV39 138 aa12.54□□□□□ -0.4
GRAMD2B-219ENST00000544396 OCR1Q9BZK8 76 aa12.54□□□□□ -0.4
GRAMD2B-219ENST00000544396 PSPHP1O15172 72 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms