RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 CPAMD8Q8IZJ3 1885 aa10.6□□□□□ -0.71
CHD4-210ENST00000544040 EPM2AB3EWF7 344 aa10.59□□□□□ -0.71
CHD4-210ENST00000544040 MUC22E2RYF6 1773 aaPredicted RBP10.59□□□□□ -0.71
CHD4-210ENST00000544040 LRP4O75096 1905 aa10.58□□□□□ -0.72
CHD4-210ENST00000544040 Q8NBF4 154 aa10.58□□□□□ -0.72
CHD4-210ENST00000544040 Q6ZRX8 168 aa10.58□□□□□ -0.72
CHD4-210ENST00000544040 Q96NJ1 140 aa10.58□□□□□ -0.72
CHD4-210ENST00000544040 BCE1O60756 84 aa10.58□□□□□ -0.72
CHD4-210ENST00000544040 TET2Q6N021 2002 aaPredicted RBP10.57□□□□□ -0.72
CHD4-210ENST00000544040 LOC110117498A0A087WWA1 95 aa10.57□□□□□ -0.72
CHD4-210ENST00000544040 VPREB1P12018 145 aa10.55□□□□□ -0.72
CHD4-210ENST00000544040 A8MUN3 132 aa10.55□□□□□ -0.72
CHD4-210ENST00000544040 FAM19A4Q96LR4 140 aa10.55□□□□□ -0.72
CHD4-210ENST00000544040 H3BPC8 53 aa10.54□□□□□ -0.72
CHD4-210ENST00000544040 TYMSOSQ8TAI1 123 aa10.54□□□□□ -0.72
CHD4-210ENST00000544040 IGLV5-45A0A087WSX0 123 aa10.53□□□□□ -0.72
CHD4-210ENST00000544040 PRO3102Q9H379 93 aa10.52□□□□□ -0.72
CHD4-210ENST00000544040 LINC01600Q96MT4 127 aa10.52□□□□□ -0.72
CHD4-210ENST00000544040 TRBV7-4A0A0J9YYF1 115 aa10.52□□□□□ -0.73
CHD4-210ENST00000544040 COA5Q86WW8 74 aa10.51□□□□□ -0.73
CHD4-210ENST00000544040 RTL8CO15255 209 aa10.51□□□□□ -0.73
CHD4-210ENST00000544040 K7EQZ3 153 aa10.51□□□□□ -0.73
CHD4-210ENST00000544040 FAM168BA1KXE4 195 aa10.5□□□□□ -0.73
CHD4-210ENST00000544040 CACNA1AO00555 2505 aa10.5□□□□□ -0.73
CHD4-210ENST00000544040 APLNQ9ULZ1 77 aa10.5□□□□□ -0.73
CHD4-210ENST00000544040 NHLRC4P0CG21 123 aaPredicted RBP10.49□□□□□ -0.73
CHD4-210ENST00000544040 ABCA2Q9BZC7 2435 aa10.49□□□□□ -0.73
CHD4-210ENST00000544040 DOPEY1Q5JWR5 2465 aa10.47□□□□□ -0.73
CHD4-210ENST00000544040 A0A1B0GW54 56 aa10.47□□□□□ -0.73
CHD4-210ENST00000544040 Q6ZRP5 223 aa10.45□□□□□ -0.74
CHD4-210ENST00000544040 C16orf90A8MZG2 172 aa10.45□□□□□ -0.74
CHD4-210ENST00000544040 ADAMTS20P59510 1910 aa10.45□□□□□ -0.74
CHD4-210ENST00000544040 NAV2Q8IVL1 2488 aa10.45□□□□□ -0.74
CHD4-210ENST00000544040 A8MWP4 228 aa10.44□□□□□ -0.74
CHD4-210ENST00000544040 LOC101927531A0A1B0GV80 90 aa10.43□□□□□ -0.74
CHD4-210ENST00000544040 MRPL34Q9BQ48 92 aaKnown RBP10.41□□□□□ -0.74
CHD4-210ENST00000544040 LINC00588Q9Y4M8 146 aa10.41□□□□□ -0.74
CHD4-210ENST00000544040 FAM229AH3BQW9 127 aa10.41□□□□□ -0.74
CHD4-210ENST00000544040 SRCAPQ6ZRS2 3230 aa10.41□□□□□ -0.74
CHD4-210ENST00000544040 CCDC168Q8NDH2 2452 aa10.4□□□□□ -0.74
CHD4-210ENST00000544040 LITAFQ99732 161 aa10.4□□□□□ -0.74
CHD4-210ENST00000544040 DSCR10P59022 87 aa10.4□□□□□ -0.74
CHD4-210ENST00000544040 UQCR11O14957 56 aa10.4□□□□□ -0.75
CHD4-210ENST00000544040 MYO18BQ8IUG5 2567 aa10.39□□□□□ -0.75
CHD4-210ENST00000544040 NBDYA0A0U1RRE5 68 aa10.38□□□□□ -0.75
CHD4-210ENST00000544040 CRIPTQ9P021 101 aa10.38□□□□□ -0.75
CHD4-210ENST00000544040 MIR22HGQ0VDD5 57 aa10.38□□□□□ -0.75
CHD4-210ENST00000544040 TTC28Q96AY4 2481 aa10.37□□□□□ -0.75
CHD4-210ENST00000544040 GVQW2A0A096LPI5 108 aaPredicted RBP10.36□□□□□ -0.75
CHD4-210ENST00000544040 IGLV6-57P01721 117 aa10.36□□□□□ -0.75
CHD4-210ENST00000544040 H3BNG1 76 aa10.36□□□□□ -0.75
CHD4-210ENST00000544040 C10orf142B7Z368 130 aa10.36□□□□□ -0.75
CHD4-210ENST00000544040 CYP4F30PQ9H0H9 118 aa10.35□□□□□ -0.75
CHD4-210ENST00000544040 A0A0G2JQZ4 141 aa10.35□□□□□ -0.75
CHD4-210ENST00000544040 A0A1W2PNN7 141 aa10.35□□□□□ -0.75
CHD4-210ENST00000544040 C9orf92A6NGG3 77 aa10.33□□□□□ -0.76
CHD4-210ENST00000544040 Q8NAQ8 132 aa10.33□□□□□ -0.76
CHD4-210ENST00000544040 PIEZO2Q9H5I5 2752 aa10.32□□□□□ -0.76
CHD4-210ENST00000544040 IGFL1Q6UW32 110 aa10.32□□□□□ -0.76
CHD4-210ENST00000544040 PTPRBP23467 1997 aa10.32□□□□□ -0.76
CHD4-210ENST00000544040 ERC2-IT1O76042 136 aa10.31□□□□□ -0.76
CHD4-210ENST00000544040 IGLV1-50A0A075B6I6 118 aa10.3□□□□□ -0.76
CHD4-210ENST00000544040 LINC00336Q6ZUF6 198 aa10.3□□□□□ -0.76
CHD4-210ENST00000544040 OBSCN-AS1Q96MR7 158 aa10.3□□□□□ -0.76
CHD4-210ENST00000544040 C9orf129Q5T035 196 aaKnown RBP10.29□□□□□ -0.76
CHD4-210ENST00000544040 COX6B2Q6YFQ2 88 aa10.29□□□□□ -0.76
CHD4-210ENST00000544040 C8orf17Q9NRJ1 99 aa10.28□□□□□ -0.76
CHD4-210ENST00000544040 EIF4EBP3O60516 100 aaPredicted RBP10.28□□□□□ -0.76
CHD4-210ENST00000544040 COL27A1Q8IZC6 1860 aaPredicted RBP10.26□□□□□ -0.77
CHD4-210ENST00000544040 A0A0D9SG42 100 aa10.25□□□□□ -0.77
CHD4-210ENST00000544040 DNAH10OSP0CZ25 163 aa10.25□□□□□ -0.77
CHD4-210ENST00000544040 KRTAP24-1Q3LI83 254 aa10.25□□□□□ -0.77
CHD4-210ENST00000544040 PRR15Q8IV56 129 aa10.24□□□□□ -0.77
CHD4-210ENST00000544040 KCNQ1DNQ9H478 68 aa10.23□□□□□ -0.77
CHD4-210ENST00000544040 J3QL48 77 aa10.22□□□□□ -0.77
CHD4-210ENST00000544040 LINC01554Q52M75 96 aa10.22□□□□□ -0.77
CHD4-210ENST00000544040 LINC00528Q8N1L1 170 aa10.22□□□□□ -0.77
CHD4-210ENST00000544040 ANAPC11Q9NYG5 84 aa10.22□□□□□ -0.77
CHD4-210ENST00000544040 CD164Q04900 197 aa10.21□□□□□ -0.77
CHD4-210ENST00000544040 KTN1-AS1Q86SY8 53 aa10.21□□□□□ -0.77
CHD4-210ENST00000544040 A0A1B0GVX0 72 aa10.21□□□□□ -0.78
CHD4-210ENST00000544040 KLKP1Q107X0 134 aa10.2□□□□□ -0.78
CHD4-210ENST00000544040 Q8N377 158 aa10.2□□□□□ -0.78
CHD4-210ENST00000544040 H7BZZ5 65 aa10.19□□□□□ -0.78
CHD4-210ENST00000544040 IGF2RP11717 2491 aa10.18□□□□□ -0.78
CHD4-210ENST00000544040 LCA10Q71F78 164 aa10.17□□□□□ -0.78
CHD4-210ENST00000544040 LINC00304Q8N9R0 145 aa10.16□□□□□ -0.78
CHD4-210ENST00000544040 C15orf56Q8N910 161 aa10.15□□□□□ -0.78
CHD4-210ENST00000544040 MYO9AB2RTY4 2548 aa10.15□□□□□ -0.79
CHD4-210ENST00000544040 FN1P02751 2386 aaKnown RBP10.15□□□□□ -0.79
CHD4-210ENST00000544040 Q8N1X5 172 aa10.14□□□□□ -0.79
CHD4-210ENST00000544040 CDC42SE1Q9NRR8 79 aa10.13□□□□□ -0.79
CHD4-210ENST00000544040 IGLV5-37A0A075B6J1 123 aa10.12□□□□□ -0.79
CHD4-210ENST00000544040 NCOR2Q9Y618 2525 aa10.11□□□□□ -0.79
CHD4-210ENST00000544040 SMR3BP02814 79 aaPredicted RBP10.11□□□□□ -0.79
CHD4-210ENST00000544040 ZNF861PO60384 105 aa10.1□□□□□ -0.79
CHD4-210ENST00000544040 CSNK1G2-AS1Q8NCQ2 148 aa10.09□□□□□ -0.79
CHD4-210ENST00000544040 IGLV5-48A0A075B6I7 105 aa10.09□□□□□ -0.79
CHD4-210ENST00000544040 FAM104AQ969W3 186 aa10.08□□□□□ -0.8
CHD4-210ENST00000544040 LRRK2Q5S007 2527 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms