RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 FAM19A1Q7Z5A9 133 aa4.28□□□□□ -1.72
NUP43-206ENST00000543637 CHCHD1Q96BP2 118 aaKnown RBP4.28□□□□□ -1.72
NUP43-206ENST00000543637 A0A096LNJ9 63 aa4.27□□□□□ -1.73
NUP43-206ENST00000543637 C11orf86A6NJI1 115 aa4.27□□□□□ -1.73
NUP43-206ENST00000543637 LINC00587B1AMM8 73 aa4.27□□□□□ -1.73
NUP43-206ENST00000543637 HSBP1O75506 76 aa4.27□□□□□ -1.73
NUP43-206ENST00000543637 TSPAN13O95857 204 aa4.27□□□□□ -1.73
NUP43-206ENST00000543637 IFI27L1Q96BM0 104 aa4.27□□□□□ -1.73
NUP43-206ENST00000543637 URB1-AS1Q96HZ7 61 aa4.27□□□□□ -1.73
NUP43-206ENST00000543637 SND1-IT1Q9HBX3 110 aa4.27□□□□□ -1.73
NUP43-206ENST00000543637 IGKV2D-26A0A0A0MRZ7 120 aa4.26□□□□□ -1.73
NUP43-206ENST00000543637 TRAV12-1A0A0B4J245 112 aa4.26□□□□□ -1.73
NUP43-206ENST00000543637 S100A12P80511 92 aa4.26□□□□□ -1.73
NUP43-206ENST00000543637 MEIG1Q5JSS6 88 aa4.26□□□□□ -1.73
NUP43-206ENST00000543637 KRTAP9-9Q9BYP9 154 aa4.26□□□□□ -1.73
NUP43-206ENST00000543637 KRTAP9-4Q9BYQ2 154 aa4.26□□□□□ -1.73
NUP43-206ENST00000543637 A0A0U1RRA0 63 aa4.25□□□□□ -1.73
NUP43-206ENST00000543637 HERV-K104P63124 156 aa4.25□□□□□ -1.73
NUP43-206ENST00000543637 KRTAP19-1Q8IUB9 90 aa4.25□□□□□ -1.73
NUP43-206ENST00000543637 MAP1LC3CQ9BXW4 147 aa4.25□□□□□ -1.73
NUP43-206ENST00000543637 TMEM126AQ9H061 195 aa4.25□□□□□ -1.73
NUP43-206ENST00000543637 MYMXA0A1B0GTQ4 84 aa4.24□□□□□ -1.73
NUP43-206ENST00000543637 TMEM223A0PJW6 202 aa4.24□□□□□ -1.73
NUP43-206ENST00000543637 H0Y8G0 127 aa4.24□□□□□ -1.73
NUP43-206ENST00000543637 M0R378 163 aa4.24□□□□□ -1.73
NUP43-206ENST00000543637 SCO1O75880 301 aa4.24□□□□□ -1.73
NUP43-206ENST00000543637 VPREB1P12018 145 aa4.24□□□□□ -1.73
NUP43-206ENST00000543637 FAM229BQ4G0N7 80 aa4.24□□□□□ -1.73
NUP43-206ENST00000543637 CBLN2Q8IUK8 224 aa4.24□□□□□ -1.73
NUP43-206ENST00000543637 LEPROTL1O95214 131 aa4.23□□□□□ -1.73
NUP43-206ENST00000543637 SMIM13P0DJ93 91 aa4.23□□□□□ -1.73
NUP43-206ENST00000543637 PRLHP81277 87 aa4.23□□□□□ -1.73
NUP43-206ENST00000543637 FAM19A2Q8N3H0 131 aa4.23□□□□□ -1.73
NUP43-206ENST00000543637 ANAPC11Q9NYG5 84 aa4.23□□□□□ -1.73
NUP43-206ENST00000543637 HMCN2Q8NDA2 5059 aa4.22□□□□□ -1.73
NUP43-206ENST00000543637 A0A087X002 238 aa4.22□□□□□ -1.73
NUP43-206ENST00000543637 TMEM238C9JI98 176 aa4.22□□□□□ -1.73
NUP43-206ENST00000543637 TRGC2P03986 189 aa4.22□□□□□ -1.73
NUP43-206ENST00000543637 HERVK_113P61574 105 aa4.22□□□□□ -1.73
NUP43-206ENST00000543637 CTAG1AP78358 180 aa4.22□□□□□ -1.73
NUP43-206ENST00000543637 BOD1L2Q8IYS8 172 aa4.22□□□□□ -1.73
NUP43-206ENST00000543637 LINC00304Q8N9R0 145 aa4.22□□□□□ -1.73
NUP43-206ENST00000543637 HIGD2AQ9BW72 106 aa4.22□□□□□ -1.73
NUP43-206ENST00000543637 NDUFA12Q9UI09 145 aa4.22□□□□□ -1.73
NUP43-206ENST00000543637 ZNF706Q9Y5V0 76 aaPredicted RBP4.22□□□□□ -1.73
NUP43-206ENST00000543637 ETDCA0A1B0GVM5 59 aa4.21□□□□□ -1.74
NUP43-206ENST00000543637 KRTAP13-1Q8IUC0 172 aa4.21□□□□□ -1.74
NUP43-206ENST00000543637 MIR7-3HGQ8N6C7 128 aa4.21□□□□□ -1.74
NUP43-206ENST00000543637 PLEKHB2Q96CS7 222 aa4.21□□□□□ -1.74
NUP43-206ENST00000543637 HSPB8Q9UJY1 196 aa4.21□□□□□ -1.74
NUP43-206ENST00000543637 PRYO14603 147 aa4.2□□□□□ -1.74
NUP43-206ENST00000543637 NCR3O14931 201 aa4.2□□□□□ -1.74
NUP43-206ENST00000543637 LEPROTO15243 131 aa4.2□□□□□ -1.74
NUP43-206ENST00000543637 FABP4P15090 132 aa4.2□□□□□ -1.74
NUP43-206ENST00000543637 PLNP26678 52 aa4.2□□□□□ -1.74
NUP43-206ENST00000543637 SPAG11AQ6PDA7 123 aa4.2□□□□□ -1.74
NUP43-206ENST00000543637 YPEL4Q96NS1 127 aa4.2□□□□□ -1.74
NUP43-206ENST00000543637 MIEN1Q9BRT3 115 aa4.2□□□□□ -1.74
NUP43-206ENST00000543637 UBR4Q5T4S7 5183 aa4.2□□□□□ -1.74
NUP43-206ENST00000543637 KRTAP4-8A0A0G2JLE6 195 aa4.19□□□□□ -1.74
NUP43-206ENST00000543637 A0A0U1RQV1 116 aa4.19□□□□□ -1.74
NUP43-206ENST00000543637 DPM2O94777 84 aa4.19□□□□□ -1.74
NUP43-206ENST00000543637 LGALS3P17931 250 aaKnown RBP4.19□□□□□ -1.74
NUP43-206ENST00000543637 KRTAP13-2Q52LG2 175 aa4.19□□□□□ -1.74
NUP43-206ENST00000543637 J3QQQ9 107 aa4.18□□□□□ -1.74
NUP43-206ENST00000543637 SERF1AO75920 110 aa4.18□□□□□ -1.74
NUP43-206ENST00000543637 IGKCP01834 107 aa4.18□□□□□ -1.74
NUP43-206ENST00000543637 NMUP48645 174 aa4.18□□□□□ -1.74
NUP43-206ENST00000543637 S100A7L2Q5SY68 101 aa4.18□□□□□ -1.74
NUP43-206ENST00000543637 LINC00337Q8N6G1 96 aa4.18□□□□□ -1.74
NUP43-206ENST00000543637 SMCR5Q8TEV8 140 aa4.18□□□□□ -1.74
NUP43-206ENST00000543637 KCNQ1DNQ9H478 68 aa4.18□□□□□ -1.74
NUP43-206ENST00000543637 TNXBP22105 4242 aa4.18□□□□□ -1.74
NUP43-206ENST00000543637 DDTP30046 118 aa4.17□□□□□ -1.74
NUP43-206ENST00000543637 HINT1P49773 126 aaPredicted RBP4.17□□□□□ -1.74
NUP43-206ENST00000543637 Q8NDZ9 215 aa4.17□□□□□ -1.74
NUP43-206ENST00000543637 SPRR4Q96PI1 79 aa4.17□□□□□ -1.74
NUP43-206ENST00000543637 CDIP1Q9H305 208 aa4.17□□□□□ -1.74
NUP43-206ENST00000543637 CBY1Q9Y3M2 126 aa4.17□□□□□ -1.74
NUP43-206ENST00000543637 LOC107984156A0A0G2JMH3 177 aa4.16□□□□□ -1.74
NUP43-206ENST00000543637 TRBV10-3A0A0K0K1G6 114 aa4.16□□□□□ -1.74
NUP43-206ENST00000543637 TRBV10-2A0A0K0K1G8 114 aa4.16□□□□□ -1.74
NUP43-206ENST00000543637 JOSD1Q15040 202 aaPredicted RBP4.16□□□□□ -1.74
NUP43-206ENST00000543637 ARL17AQ8IVW1 177 aa4.16□□□□□ -1.74
NUP43-206ENST00000543637 SLC7A5P1Q8MH63 180 aa4.16□□□□□ -1.74
NUP43-206ENST00000543637 C3orf22Q8N5N4 141 aa4.16□□□□□ -1.74
NUP43-206ENST00000543637 RETNLBQ9BQ08 111 aa4.16□□□□□ -1.74
NUP43-206ENST00000543637 IGLV7-46A0A075B6I9 117 aa4.15□□□□□ -1.75
NUP43-206ENST00000543637 DAND5Q8N907 189 aa4.15□□□□□ -1.75
NUP43-206ENST00000543637 PMCHL2Q9BQD1 86 aa4.15□□□□□ -1.75
NUP43-206ENST00000543637 PPDPFQ9H3Y8 114 aa4.15□□□□□ -1.75
NUP43-206ENST00000543637 SPANXB1Q9NS25 103 aaPredicted RBP4.15□□□□□ -1.75
NUP43-206ENST00000543637 COLCA2A8K830 154 aa4.14□□□□□ -1.75
NUP43-206ENST00000543637 NDUFC2O95298 119 aa4.14□□□□□ -1.75
NUP43-206ENST00000543637 SPRR1AP35321 89 aa4.14□□□□□ -1.75
NUP43-206ENST00000543637 GAGE2AQ6NT46 116 aa4.14□□□□□ -1.75
NUP43-206ENST00000543637 B5MCH6 92 aa4.13□□□□□ -1.75
NUP43-206ENST00000543637 E9PLD3 99 aa4.13□□□□□ -1.75
NUP43-206ENST00000543637 SPINK1P00995 79 aa4.13□□□□□ -1.75
NUP43-206ENST00000543637 LINC00310P59036 64 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms