RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 IGLV4-3A0A075B6K6 122 aa9.16□□□□□ -0.94
RTN3-211ENST00000542238 CKS1BP61024 79 aa9.16□□□□□ -0.94
RTN3-211ENST00000542238 FA2HQ7L5A8 372 aa9.16□□□□□ -0.94
RTN3-211ENST00000542238 LINC01561Q8N1V8 128 aa9.16□□□□□ -0.94
RTN3-211ENST00000542238 ORMDL2Q53FV1 153 aa9.15□□□□□ -0.94
RTN3-211ENST00000542238 KRTAP9-2Q9BYQ4 174 aa9.15□□□□□ -0.94
RTN3-211ENST00000542238 UBE2V1Q13404 147 aa9.14□□□□□ -0.95
RTN3-211ENST00000542238 TOMM7Q9P0U1 55 aa9.14□□□□□ -0.95
RTN3-211ENST00000542238 C22orf24Q9Y442 160 aa9.14□□□□□ -0.95
RTN3-211ENST00000542238 RPL28P46779 137 aaKnown RBP9.13□□□□□ -0.95
RTN3-211ENST00000542238 C6orf226Q5I0X4 101 aa9.13□□□□□ -0.95
RTN3-211ENST00000542238 COX8AP10176 69 aa9.12□□□□□ -0.95
RTN3-211ENST00000542238 CRYGAP11844 174 aa9.12□□□□□ -0.95
RTN3-211ENST00000542238 BVES-AS1Q5T3Y7 98 aa9.12□□□□□ -0.95
RTN3-211ENST00000542238 CBY1Q9Y3M2 126 aa9.12□□□□□ -0.95
RTN3-211ENST00000542238 Q8IZM0 81 aa9.11□□□□□ -0.95
RTN3-211ENST00000542238 TYMSOSQ8TAI1 123 aa9.11□□□□□ -0.95
RTN3-211ENST00000542238 VCX2Q9H322 139 aa9.11□□□□□ -0.95
RTN3-211ENST00000542238 XAGE1AQ9HD64 81 aa9.11□□□□□ -0.95
RTN3-211ENST00000542238 A0A096LNJ9 63 aa9.1□□□□□ -0.95
RTN3-211ENST00000542238 LOC389332A0A1B0GUA5 103 aa9.1□□□□□ -0.95
RTN3-211ENST00000542238 TAX1BP3O14907 124 aa9.1□□□□□ -0.95
RTN3-211ENST00000542238 CYSLTR1Q9Y271 337 aa9.1□□□□□ -0.95
RTN3-211ENST00000542238 A0A087X002 238 aa9.09□□□□□ -0.95
RTN3-211ENST00000542238 BCE1O60756 84 aa9.09□□□□□ -0.95
RTN3-211ENST00000542238 HBDP02042 147 aa9.09□□□□□ -0.95
RTN3-211ENST00000542238 MRPL55Q7Z7F7 128 aaKnown RBP9.09□□□□□ -0.95
RTN3-211ENST00000542238 TP73-AS1Q9UF72 201 aa9.09□□□□□ -0.95
RTN3-211ENST00000542238 ZC2HC1BQ5TFG8 222 aa9.08□□□□□ -0.96
RTN3-211ENST00000542238 C2orf66Q6UXQ4 117 aa9.08□□□□□ -0.96
RTN3-211ENST00000542238 C2orf91Q6ZV80 131 aa9.08□□□□□ -0.96
RTN3-211ENST00000542238 TOMM6Q96B49 74 aa9.08□□□□□ -0.96
RTN3-211ENST00000542238 AMELXQ99217 191 aa9.08□□□□□ -0.96
RTN3-211ENST00000542238 F8VRH5 84 aa9.07□□□□□ -0.96
RTN3-211ENST00000542238 SEC11AP67812 179 aa9.07□□□□□ -0.96
RTN3-211ENST00000542238 TIMM17AQ99595 171 aa9.07□□□□□ -0.96
RTN3-211ENST00000542238 HERVK_113P63121 156 aa9.06□□□□□ -0.96
RTN3-211ENST00000542238 FAM19A3Q7Z5A8 133 aa9.06□□□□□ -0.96
RTN3-211ENST00000542238 IGIPA6NJ69 53 aa9.05□□□□□ -0.96
RTN3-211ENST00000542238 PAPPA-AS1Q5QFB9 102 aa9.05□□□□□ -0.96
RTN3-211ENST00000542238 Q6ZVH6 145 aa9.05□□□□□ -0.96
RTN3-211ENST00000542238 ERASQ7Z444 233 aa9.05□□□□□ -0.96
RTN3-211ENST00000542238 IFI27L1Q96BM0 104 aa9.05□□□□□ -0.96
RTN3-211ENST00000542238 CXCL5P42830 114 aa9.04□□□□□ -0.96
RTN3-211ENST00000542238 VAMP3Q15836 100 aa9.04□□□□□ -0.96
RTN3-211ENST00000542238 ANKRD39Q53RE8 183 aa9.04□□□□□ -0.96
RTN3-211ENST00000542238 LCE2AQ5TA79 106 aaPredicted RBP9.04□□□□□ -0.96
RTN3-211ENST00000542238 BOD1L2Q8IYS8 172 aa9.04□□□□□ -0.96
RTN3-211ENST00000542238 GEMIN7Q9H840 131 aaKnown RBP9.04□□□□□ -0.96
RTN3-211ENST00000542238 CDKN2A-AS1Q9UH64 79 aa9.04□□□□□ -0.96
RTN3-211ENST00000542238 RPL37AP8A6NKH3 93 aa9.03□□□□□ -0.96
RTN3-211ENST00000542238 H0Y8G0 127 aa9.03□□□□□ -0.96
RTN3-211ENST00000542238 HSD52Q0P140 79 aa9.03□□□□□ -0.96
RTN3-211ENST00000542238 LINC00167Q96N53 147 aa9.03□□□□□ -0.96
RTN3-211ENST00000542238 ANAPC11Q9NYG5 84 aa9.02□□□□□ -0.97
RTN3-211ENST00000542238 H3BRM9 83 aa9.01□□□□□ -0.97
RTN3-211ENST00000542238 UBE2AP49459 152 aa9.01□□□□□ -0.97
RTN3-211ENST00000542238 RETNLBQ9BQ08 111 aa9.01□□□□□ -0.97
RTN3-211ENST00000542238 CDIP1Q9H305 208 aa9.01□□□□□ -0.97
RTN3-211ENST00000542238 A6NDN8 102 aa9□□□□□ -0.97
RTN3-211ENST00000542238 GAGE10A6NGK3 116 aa9□□□□□ -0.97
RTN3-211ENST00000542238 FAM229BQ4G0N7 80 aa9□□□□□ -0.97
RTN3-211ENST00000542238 KRTAP13-2Q52LG2 175 aa9□□□□□ -0.97
RTN3-211ENST00000542238 LINC00304Q8N9R0 145 aa9□□□□□ -0.97
RTN3-211ENST00000542238 ATP5LO75964 103 aa8.99□□□□□ -0.97
RTN3-211ENST00000542238 NKAPP1Q8N9T2 125 aa8.99□□□□□ -0.97
RTN3-211ENST00000542238 SCGB3A1Q96QR1 104 aa8.99□□□□□ -0.97
RTN3-211ENST00000542238 HIGD1BQ9P298 99 aa8.99□□□□□ -0.97
RTN3-211ENST00000542238 FAT4Q6V0I7 4981 aa8.98□□□□□ -0.97
RTN3-211ENST00000542238 C9orf118A6NHY6 69 aa8.98□□□□□ -0.97
RTN3-211ENST00000542238 COX7B2Q8TF08 81 aa8.98□□□□□ -0.97
RTN3-211ENST00000542238 IGKV2D-26A0A0A0MRZ7 120 aa8.97□□□□□ -0.97
RTN3-211ENST00000542238 TPRXLQ17RH7 258 aa8.97□□□□□ -0.97
RTN3-211ENST00000542238 IGLV7-46A0A075B6I9 117 aa8.96□□□□□ -0.98
RTN3-211ENST00000542238 IGLV5-37A0A075B6J1 123 aa8.96□□□□□ -0.98
RTN3-211ENST00000542238 KRTAP9-6A0A140TA67 174 aa8.96□□□□□ -0.98
RTN3-211ENST00000542238 SMIM1B2RUZ4 78 aa8.96□□□□□ -0.98
RTN3-211ENST00000542238 KRTAP13-1Q8IUC0 172 aa8.96□□□□□ -0.98
RTN3-211ENST00000542238 GTF2H5Q6ZYL4 71 aa8.95□□□□□ -0.98
RTN3-211ENST00000542238 CST9LQ9H4G1 147 aa8.95□□□□□ -0.98
RTN3-211ENST00000542238 DPM2O94777 84 aa8.94□□□□□ -0.98
RTN3-211ENST00000542238 IGKCP01834 107 aa8.94□□□□□ -0.98
RTN3-211ENST00000542238 PMVKQ15126 192 aa8.94□□□□□ -0.98
RTN3-211ENST00000542238 IGKV2-28A0A075B6P5 120 aa8.93□□□□□ -0.98
RTN3-211ENST00000542238 TRAV12-1A0A0B4J245 112 aa8.93□□□□□ -0.98
RTN3-211ENST00000542238 TINCRA0A1B0GVN0 87 aa8.93□□□□□ -0.98
RTN3-211ENST00000542238 K7EP34 96 aa8.93□□□□□ -0.98
RTN3-211ENST00000542238 IGKV2D-28P01615 120 aa8.93□□□□□ -0.98
RTN3-211ENST00000542238 PCP2Q8IVA1 136 aa8.93□□□□□ -0.98
RTN3-211ENST00000542238 NMUP48645 174 aa8.92□□□□□ -0.98
RTN3-211ENST00000542238 OCIAD2Q56VL3 154 aa8.92□□□□□ -0.98
RTN3-211ENST00000542238 IGLV5-45A0A087WSX0 123 aa8.91□□□□□ -0.98
RTN3-211ENST00000542238 PCP4P48539 62 aa8.91□□□□□ -0.98
RTN3-211ENST00000542238 SPINK8P0C7L1 97 aa8.9□□□□□ -0.98
RTN3-211ENST00000542238 PRLHP81277 87 aa8.9□□□□□ -0.98
RTN3-211ENST00000542238 TAL2Q16559 108 aa8.9□□□□□ -0.98
RTN3-211ENST00000542238 FAM19A1Q7Z5A9 133 aa8.9□□□□□ -0.98
RTN3-211ENST00000542238 K7ERU9 68 aa8.89□□□□□ -0.99
RTN3-211ENST00000542238 PPDPFQ9H3Y8 114 aa8.89□□□□□ -0.99
RTN3-211ENST00000542238 A0A1W2PPM0 123 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms