RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 DNAH9Q9NYC9 4486 aa9.95□□□□□ -0.82
SFSWAP-210ENST00000541286 K7EIL1 84 aa9.95□□□□□ -0.82
SFSWAP-210ENST00000541286 RPL28P46779 137 aaKnown RBP9.95□□□□□ -0.82
SFSWAP-210ENST00000541286 ENHOQ6UWT2 76 aa9.95□□□□□ -0.82
SFSWAP-210ENST00000541286 C16orf74Q96GX8 76 aa9.94□□□□□ -0.82
SFSWAP-210ENST00000541286 GHRHP01286 108 aa9.94□□□□□ -0.82
SFSWAP-210ENST00000541286 IGLV10-54A0A075B6I4 117 aa9.93□□□□□ -0.82
SFSWAP-210ENST00000541286 Q5XG85 94 aa9.93□□□□□ -0.82
SFSWAP-210ENST00000541286 TRBV6-8A0A0A6YYG3 113 aa9.92□□□□□ -0.82
SFSWAP-210ENST00000541286 GYPEP15421 78 aa9.92□□□□□ -0.82
SFSWAP-210ENST00000541286 UPK3BQ9BT76 320 aa9.92□□□□□ -0.82
SFSWAP-210ENST00000541286 PLAC8L1A1L4L8 177 aa9.92□□□□□ -0.82
SFSWAP-210ENST00000541286 IL17DQ8TAD2 202 aa9.92□□□□□ -0.82
SFSWAP-210ENST00000541286 TRAV13-2A0A0B4J235 113 aa9.91□□□□□ -0.82
SFSWAP-210ENST00000541286 CCL18P55774 89 aa9.91□□□□□ -0.82
SFSWAP-210ENST00000541286 EGFEM1PQ0D2K5 195 aa9.91□□□□□ -0.82
SFSWAP-210ENST00000541286 PKIGQ9Y2B9 76 aa9.91□□□□□ -0.82
SFSWAP-210ENST00000541286 TMEM258P61165 79 aa9.9□□□□□ -0.82
SFSWAP-210ENST00000541286 SNURFQ9Y675 71 aa9.9□□□□□ -0.82
SFSWAP-210ENST00000541286 CSNK1G2-AS1Q8NCQ2 148 aa9.9□□□□□ -0.83
SFSWAP-210ENST00000541286 TRBV6-4A0A1B0GX49 114 aa9.89□□□□□ -0.83
SFSWAP-210ENST00000541286 RPS28P62857 69 aaKnown RBP9.89□□□□□ -0.83
SFSWAP-210ENST00000541286 HTN3P15516 51 aa9.88□□□□□ -0.83
SFSWAP-210ENST00000541286 C1orf43Q9BWL3 253 aa9.87□□□□□ -0.83
SFSWAP-210ENST00000541286 IGHV3OR16-9A0A0B4J2B5 98 aa9.87□□□□□ -0.83
SFSWAP-210ENST00000541286 Q8N3U1 123 aa9.86□□□□□ -0.83
SFSWAP-210ENST00000541286 LINC00336Q6ZUF6 198 aa9.86□□□□□ -0.83
SFSWAP-210ENST00000541286 LINC00959A0A1B0GUT2 108 aa9.86□□□□□ -0.83
SFSWAP-210ENST00000541286 FAM222AQ5U5X8 452 aa9.85□□□□□ -0.83
SFSWAP-210ENST00000541286 Q6JHZ5 121 aa9.85□□□□□ -0.83
SFSWAP-210ENST00000541286 CELA1Q9UNI1 258 aa9.84□□□□□ -0.83
SFSWAP-210ENST00000541286 X6R8D5 127 aa9.84□□□□□ -0.83
SFSWAP-210ENST00000541286 A0A0U1RQV1 116 aa9.84□□□□□ -0.83
SFSWAP-210ENST00000541286 C9orf116Q5BN46 136 aaPredicted RBP9.84□□□□□ -0.83
SFSWAP-210ENST00000541286 SS18Q15532 418 aa9.83□□□□□ -0.84
SFSWAP-210ENST00000541286 HAMPP81172 84 aa9.83□□□□□ -0.84
SFSWAP-210ENST00000541286 LINC00269Q8N2A0 174 aa9.83□□□□□ -0.84
SFSWAP-210ENST00000541286 ANGP03950 147 aaKnown RBP9.82□□□□□ -0.84
SFSWAP-210ENST00000541286 A0A087WZ39 114 aa9.82□□□□□ -0.84
SFSWAP-210ENST00000541286 CMC4P56277 68 aaPredicted RBP9.82□□□□□ -0.84
SFSWAP-210ENST00000541286 SCXQ7RTU7 201 aa9.82□□□□□ -0.84
SFSWAP-210ENST00000541286 FAM19A3Q7Z5A8 133 aa9.82□□□□□ -0.84
SFSWAP-210ENST00000541286 ORMDL1Q9P0S3 153 aa9.82□□□□□ -0.84
SFSWAP-210ENST00000541286 IGHV4-28A0A0C4DH34 117 aa9.81□□□□□ -0.84
SFSWAP-210ENST00000541286 RMI2Q96E14 147 aa9.81□□□□□ -0.84
SFSWAP-210ENST00000541286 M0R2N4 97 aa9.81□□□□□ -0.84
SFSWAP-210ENST00000541286 OVOL2Q9BRP0 275 aa9.81□□□□□ -0.84
SFSWAP-210ENST00000541286 IBA57-AS1B1ANH7 110 aa9.8□□□□□ -0.84
SFSWAP-210ENST00000541286 LINC00474Q9P2X8 69 aa9.8□□□□□ -0.84
SFSWAP-210ENST00000541286 TRAV10A0A0B4J240 114 aa9.78□□□□□ -0.84
SFSWAP-210ENST00000541286 FAM236DA0A1B0GTK5 79 aa9.78□□□□□ -0.84
SFSWAP-210ENST00000541286 FAM236CP0DP71 79 aa9.78□□□□□ -0.84
SFSWAP-210ENST00000541286 CCKP06307 115 aa9.78□□□□□ -0.84
SFSWAP-210ENST00000541286 F8WDY8 70 aa9.78□□□□□ -0.84
SFSWAP-210ENST00000541286 A0A0J9YWU9 116 aa9.77□□□□□ -0.85
SFSWAP-210ENST00000541286 APOC4P55056 127 aa9.77□□□□□ -0.85
SFSWAP-210ENST00000541286 DNAH7Q8WXX0 4024 aa9.77□□□□□ -0.85
SFSWAP-210ENST00000541286 H0YGX0 51 aa9.77□□□□□ -0.85
SFSWAP-210ENST00000541286 PRO0255Q9UI72 69 aa9.77□□□□□ -0.85
SFSWAP-210ENST00000541286 Q8NAQ8 132 aa9.75□□□□□ -0.85
SFSWAP-210ENST00000541286 CHCHD10Q8WYQ3 142 aaPredicted RBP9.75□□□□□ -0.85
SFSWAP-210ENST00000541286 KPRPQ5T749 579 aaPredicted RBP9.75□□□□□ -0.85
SFSWAP-210ENST00000541286 MPLKIPQ8TAP9 179 aa9.75□□□□□ -0.85
SFSWAP-210ENST00000541286 LAMTOR3Q9UHA4 124 aa9.74□□□□□ -0.85
SFSWAP-210ENST00000541286 STARD9Q9P2P6 4700 aa9.74□□□□□ -0.85
SFSWAP-210ENST00000541286 NANOS2P60321 138 aaKnown RBP9.74□□□□□ -0.85
SFSWAP-210ENST00000541286 S100A7L2Q5SY68 101 aa9.74□□□□□ -0.85
SFSWAP-210ENST00000541286 UBL5Q9BZL1 73 aa9.74□□□□□ -0.85
SFSWAP-210ENST00000541286 F8WEM9 126 aa9.73□□□□□ -0.85
SFSWAP-210ENST00000541286 C6orf223Q8N319 242 aa9.73□□□□□ -0.85
SFSWAP-210ENST00000541286 DAD1P61803 113 aa9.73□□□□□ -0.85
SFSWAP-210ENST00000541286 RBM3P98179 157 aaKnown RBP9.73□□□□□ -0.85
SFSWAP-210ENST00000541286 BRK1Q8WUW1 75 aa9.73□□□□□ -0.85
SFSWAP-210ENST00000541286 REG3AQ06141 175 aa9.73□□□□□ -0.85
SFSWAP-210ENST00000541286 OBSCN-AS1Q96MR7 158 aa9.73□□□□□ -0.85
SFSWAP-210ENST00000541286 LYPD5Q6UWN5 251 aa9.72□□□□□ -0.85
SFSWAP-210ENST00000541286 SEC61GP60059 68 aa9.72□□□□□ -0.85
SFSWAP-210ENST00000541286 H7BZZ5 65 aa9.71□□□□□ -0.85
SFSWAP-210ENST00000541286 C6orf99Q4VX62 202 aa9.71□□□□□ -0.86
SFSWAP-210ENST00000541286 Q8N814 137 aa9.71□□□□□ -0.86
SFSWAP-210ENST00000541286 Q6ZTC4 211 aa9.7□□□□□ -0.86
SFSWAP-210ENST00000541286 Q8IZM0 81 aa9.7□□□□□ -0.86
SFSWAP-210ENST00000541286 KLK12Q9UKR0 248 aa9.7□□□□□ -0.86
SFSWAP-210ENST00000541286 PLECQ15149 4684 aaKnown RBP9.7□□□□□ -0.86
SFSWAP-210ENST00000541286 UNQ6190/PRO20217Q6UXQ8 127 aa9.69□□□□□ -0.86
SFSWAP-210ENST00000541286 NDUFC2O95298 119 aa9.69□□□□□ -0.86
SFSWAP-210ENST00000541286 KRTAP21-3Q3LHN1 58 aa9.69□□□□□ -0.86
SFSWAP-210ENST00000541286 C10orf25Q5T742 122 aa9.69□□□□□ -0.86
SFSWAP-210ENST00000541286 FP248Q71RG6 208 aaPredicted RBP9.68□□□□□ -0.86
SFSWAP-210ENST00000541286 Q8N9L7 120 aa9.68□□□□□ -0.86
SFSWAP-210ENST00000541286 TM2D3Q9BRN9 247 aa9.68□□□□□ -0.86
SFSWAP-210ENST00000541286 XAGE1AQ9HD64 81 aa9.67□□□□□ -0.86
SFSWAP-210ENST00000541286 LRCOL1A6NCL2 159 aa9.67□□□□□ -0.86
SFSWAP-210ENST00000541286 CD164L2Q6UWJ8 174 aa9.67□□□□□ -0.86
SFSWAP-210ENST00000541286 A0A1B0GUV1 79 aa9.66□□□□□ -0.86
SFSWAP-210ENST00000541286 SPAG11BQ08648 103 aa9.66□□□□□ -0.86
SFSWAP-210ENST00000541286 Q8NDZ9 215 aa9.66□□□□□ -0.86
SFSWAP-210ENST00000541286 LINC01547P58512 204 aaPredicted RBP9.65□□□□□ -0.86
SFSWAP-210ENST00000541286 TMEM256-PLSCR3K7ERE1 68 aa9.65□□□□□ -0.86
SFSWAP-210ENST00000541286 PRO0628Q9UI54 55 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms