RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 PLA2G2DQ9UNK4 145 aa9.69□□□□□ -0.86
DDB1-218ENST00000540784 ANKRD39Q53RE8 183 aa9.68□□□□□ -0.86
DDB1-218ENST00000540784 C22orf24Q9Y442 160 aa9.68□□□□□ -0.86
DDB1-218ENST00000540784 FAT1Q14517 4588 aa9.68□□□□□ -0.86
DDB1-218ENST00000540784 HSBP1L1C9JCN9 74 aa9.67□□□□□ -0.86
DDB1-218ENST00000540784 M0QXV9 152 aa9.67□□□□□ -0.86
DDB1-218ENST00000540784 LBHQ53QV2 105 aaPredicted RBP9.67□□□□□ -0.86
DDB1-218ENST00000540784 MIR7-3HGQ8N6C7 128 aa9.67□□□□□ -0.86
DDB1-218ENST00000540784 A0A0J9YXY3 114 aa9.66□□□□□ -0.86
DDB1-218ENST00000540784 ZNF815PA8K554 130 aa9.66□□□□□ -0.86
DDB1-218ENST00000540784 RPL24P83731 157 aaKnown RBP9.66□□□□□ -0.86
DDB1-218ENST00000540784 UBE2BP63146 152 aa9.64□□□□□ -0.87
DDB1-218ENST00000540784 NKAPP1Q8N9T2 125 aa9.64□□□□□ -0.87
DDB1-218ENST00000540784 TTTY13Q9BZ97 58 aa9.64□□□□□ -0.87
DDB1-218ENST00000540784 TP73-AS1Q9UF72 201 aa9.64□□□□□ -0.87
DDB1-218ENST00000540784 IGLV5-37A0A075B6J1 123 aa9.63□□□□□ -0.87
DDB1-218ENST00000540784 KRTAP10-4P60372 401 aaPredicted RBP9.63□□□□□ -0.87
DDB1-218ENST00000540784 MRPL55Q7Z7F7 128 aaKnown RBP9.63□□□□□ -0.87
DDB1-218ENST00000540784 INAFM2P0DMQ5 153 aa9.62□□□□□ -0.87
DDB1-218ENST00000540784 DAND5Q8N907 189 aa9.62□□□□□ -0.87
DDB1-218ENST00000540784 TIMM17BO60830 172 aa9.61□□□□□ -0.87
DDB1-218ENST00000540784 VPREB1P12018 145 aa9.61□□□□□ -0.87
DDB1-218ENST00000540784 PRR3P79522 188 aaKnown RBP9.61□□□□□ -0.87
DDB1-218ENST00000540784 ADAMTSL4-AS1Q5T5F5 129 aa9.61□□□□□ -0.87
DDB1-218ENST00000540784 PCP2Q8IVA1 136 aa9.61□□□□□ -0.87
DDB1-218ENST00000540784 BOD1L2Q8IYS8 172 aa9.61□□□□□ -0.87
DDB1-218ENST00000540784 LINC00167Q96N53 147 aa9.61□□□□□ -0.87
DDB1-218ENST00000540784 PSORS1C2Q9UIG4 136 aa9.61□□□□□ -0.87
DDB1-218ENST00000540784 GAGE10A6NGK3 116 aa9.6□□□□□ -0.87
DDB1-218ENST00000540784 JOSD1Q15040 202 aaPredicted RBP9.6□□□□□ -0.87
DDB1-218ENST00000540784 SCGB1D4Q6XE38 83 aa9.6□□□□□ -0.87
DDB1-218ENST00000540784 VPS13BQ7Z7G8 4022 aa9.6□□□□□ -0.87
DDB1-218ENST00000540784 SRRM2Q9UQ35 2752 aaKnown RBP9.59□□□□□ -0.87
DDB1-218ENST00000540784 LOC107984156A0A0G2JMH3 177 aa9.59□□□□□ -0.87
DDB1-218ENST00000540784 KRTAP11-1Q8IUC1 163 aa9.59□□□□□ -0.87
DDB1-218ENST00000540784 ARL17AQ8IVW1 177 aa9.59□□□□□ -0.87
DDB1-218ENST00000540784 MIEN1Q9BRT3 115 aa9.59□□□□□ -0.87
DDB1-218ENST00000540784 RPL37AP8A6NKH3 93 aa9.58□□□□□ -0.88
DDB1-218ENST00000540784 C1orf137Q5JT78 98 aa9.58□□□□□ -0.88
DDB1-218ENST00000540784 Q8NDZ9 215 aa9.58□□□□□ -0.88
DDB1-218ENST00000540784 M0R378 163 aa9.57□□□□□ -0.88
DDB1-218ENST00000540784 LITAFQ99732 161 aa9.57□□□□□ -0.88
DDB1-218ENST00000540784 NPC2P61916 151 aa9.56□□□□□ -0.88
DDB1-218ENST00000540784 IGLV1-50A0A075B6I6 118 aa9.54□□□□□ -0.88
DDB1-218ENST00000540784 TMEM238C9JI98 176 aa9.54□□□□□ -0.88
DDB1-218ENST00000540784 HNRNPA3P51991 378 aaKnown RBP9.54□□□□□ -0.88
DDB1-218ENST00000540784 LINC00308Q8TCZ7 52 aa9.54□□□□□ -0.88
DDB1-218ENST00000540784 VAMP8Q9BV40 100 aa9.54□□□□□ -0.88
DDB1-218ENST00000540784 IGKV2-28A0A075B6P5 120 aa9.53□□□□□ -0.88
DDB1-218ENST00000540784 NCR3O14931 201 aa9.53□□□□□ -0.88
DDB1-218ENST00000540784 NDUFC2O95298 119 aa9.53□□□□□ -0.88
DDB1-218ENST00000540784 IGKV2D-28P01615 120 aa9.53□□□□□ -0.88
DDB1-218ENST00000540784 IGLV7-43P04211 117 aa9.53□□□□□ -0.88
DDB1-218ENST00000540784 SOSTDC1Q6X4U4 206 aa9.53□□□□□ -0.88
DDB1-218ENST00000540784 PAM16Q9Y3D7 125 aa9.53□□□□□ -0.88
DDB1-218ENST00000540784 ABCA13Q86UQ4 5058 aa9.53□□□□□ -0.88
DDB1-218ENST00000540784 EIF4EBP3O60516 100 aaPredicted RBP9.52□□□□□ -0.89
DDB1-218ENST00000540784 SRSF9Q13242 221 aaKnown RBP eCLIP9.52□□□□□ -0.89
DDB1-218ENST00000540784 SPATA45Q537H7 98 aa9.52□□□□□ -0.89
DDB1-218ENST00000540784 Q6ZVH6 145 aa9.52□□□□□ -0.89
DDB1-218ENST00000540784 SPANXDQ9BXN6 97 aa9.52□□□□□ -0.89
DDB1-218ENST00000540784 SPANXCQ9NY87 97 aa9.52□□□□□ -0.89
DDB1-218ENST00000540784 TRBV10-2A0A0K0K1G8 114 aa9.51□□□□□ -0.89
DDB1-218ENST00000540784 COX8AP10176 69 aa9.51□□□□□ -0.89
DDB1-218ENST00000540784 PYY3Q5JQD4 70 aa9.51□□□□□ -0.89
DDB1-218ENST00000540784 SPINK6Q6UWN8 80 aa9.51□□□□□ -0.89
DDB1-218ENST00000540784 COPS9Q8WXC6 57 aa9.51□□□□□ -0.89
DDB1-218ENST00000540784 IFITM1P13164 125 aa9.5□□□□□ -0.89
DDB1-218ENST00000540784 SPANXB1Q9NS25 103 aaPredicted RBP9.5□□□□□ -0.89
DDB1-218ENST00000540784 BCE1O60756 84 aa9.49□□□□□ -0.89
DDB1-218ENST00000540784 C14orf144Q96I85 54 aa9.49□□□□□ -0.89
DDB1-218ENST00000540784 PCLOQ9Y6V0 5065 aa9.49□□□□□ -0.89
DDB1-218ENST00000540784 DLEU1O43261 78 aa9.48□□□□□ -0.89
DDB1-218ENST00000540784 REG3GQ6UW15 175 aa9.48□□□□□ -0.89
DDB1-218ENST00000540784 MUSTN1Q8IVN3 82 aa9.48□□□□□ -0.89
DDB1-218ENST00000540784 S100A12P80511 92 aa9.47□□□□□ -0.89
DDB1-218ENST00000540784 S100A7L2Q5SY68 101 aa9.47□□□□□ -0.89
DDB1-218ENST00000540784 TRBV10-3A0A0K0K1G6 114 aa9.46□□□□□ -0.9
DDB1-218ENST00000540784 ZNF861PO60384 105 aa9.46□□□□□ -0.9
DDB1-218ENST00000540784 DDTP30046 118 aa9.46□□□□□ -0.9
DDB1-218ENST00000540784 LINC00518Q8N0U6 118 aa9.46□□□□□ -0.9
DDB1-218ENST00000540784 TMEM126AQ9H061 195 aa9.46□□□□□ -0.9
DDB1-218ENST00000540784 PPDPFQ9H3Y8 114 aa9.46□□□□□ -0.9
DDB1-218ENST00000540784 RPL28P46779 137 aaKnown RBP9.45□□□□□ -0.9
DDB1-218ENST00000540784 SLC25A34Q6PIV7 304 aa9.45□□□□□ -0.9
DDB1-218ENST00000540784 DIRC1Q969H9 104 aa9.45□□□□□ -0.9
DDB1-218ENST00000540784 KCNQ1DNQ9H478 68 aa9.45□□□□□ -0.9
DDB1-218ENST00000540784 PRYO14603 147 aa9.44□□□□□ -0.9
DDB1-218ENST00000540784 UBE2AP49459 152 aa9.44□□□□□ -0.9
DDB1-218ENST00000540784 C4orf48Q5BLP8 95 aa9.44□□□□□ -0.9
DDB1-218ENST00000540784 OR13C6PQ8NH95 151 aa9.44□□□□□ -0.9
DDB1-218ENST00000540784 IGLV6-57P01721 117 aa9.43□□□□□ -0.9
DDB1-218ENST00000540784 FAM19A1Q7Z5A9 133 aa9.43□□□□□ -0.9
DDB1-218ENST00000540784 PKHD1L1Q86WI1 4243 aa9.42□□□□□ -0.9
DDB1-218ENST00000540784 HIST1H4GQ99525 98 aa9.42□□□□□ -0.9
DDB1-218ENST00000540784 H0Y9J4 135 aa9.41□□□□□ -0.9
DDB1-218ENST00000540784 OXTP01178 125 aa9.41□□□□□ -0.9
DDB1-218ENST00000540784 CBY1Q9Y3M2 126 aa9.41□□□□□ -0.9
DDB1-218ENST00000540784 HIGD1BQ9P298 99 aa9.4□□□□□ -0.9
DDB1-218ENST00000540784 FLG2Q5D862 2391 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms