RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 SMIM9A6NGZ8 99 aa9.28□□□□□ -0.92
BNIP3-202ENST00000540159 ACYP1P07311 99 aa9.28□□□□□ -0.92
BNIP3-202ENST00000540159 SPART-AS1P0CW21 52 aa9.26□□□□□ -0.93
BNIP3-202ENST00000540159 HIST1H4AP62805 103 aaKnown RBP9.26□□□□□ -0.93
BNIP3-202ENST00000540159 MRPL23Q16540 153 aaKnown RBP9.25□□□□□ -0.93
BNIP3-202ENST00000540159 WFDC10BQ8IUB3 73 aa9.25□□□□□ -0.93
BNIP3-202ENST00000540159 SMIM20Q8N5G0 67 aa9.25□□□□□ -0.93
BNIP3-202ENST00000540159 Q8N814 137 aa9.25□□□□□ -0.93
BNIP3-202ENST00000540159 KLK5Q9Y337 293 aaPredicted RBP9.25□□□□□ -0.93
BNIP3-202ENST00000540159 TMEM126AQ9H061 195 aa9.24□□□□□ -0.93
BNIP3-202ENST00000540159 ENHOQ6UWT2 76 aa9.23□□□□□ -0.93
BNIP3-202ENST00000540159 CSMD3Q7Z407 3707 aa9.22□□□□□ -0.93
BNIP3-202ENST00000540159 MGAM2Q2M2H8 2515 aa9.22□□□□□ -0.93
BNIP3-202ENST00000540159 C9orf153Q5TBE3 101 aa9.21□□□□□ -0.93
BNIP3-202ENST00000540159 Q6ZTC4 211 aa9.21□□□□□ -0.93
BNIP3-202ENST00000540159 LAMTOR3Q9UHA4 124 aa9.21□□□□□ -0.93
BNIP3-202ENST00000540159 M0R2N4 97 aa9.2□□□□□ -0.94
BNIP3-202ENST00000540159 PRB2P02812 416 aaPredicted RBP9.2□□□□□ -0.94
BNIP3-202ENST00000540159 MIFP14174 115 aa9.2□□□□□ -0.94
BNIP3-202ENST00000540159 LELP1Q5T871 98 aa9.2□□□□□ -0.94
BNIP3-202ENST00000540159 LYPD5Q6UWN5 251 aa9.2□□□□□ -0.94
BNIP3-202ENST00000540159 TRBV10-3A0A0K0K1G6 114 aa9.19□□□□□ -0.94
BNIP3-202ENST00000540159 C6orf48Q9UBA6 75 aa9.19□□□□□ -0.94
BNIP3-202ENST00000540159 KPRPQ5T749 579 aaPredicted RBP9.18□□□□□ -0.94
BNIP3-202ENST00000540159 Q6ZQY7 126 aa9.18□□□□□ -0.94
BNIP3-202ENST00000540159 A0A1B0GX51 115 aa9.17□□□□□ -0.94
BNIP3-202ENST00000540159 PPDPFQ9H3Y8 114 aa9.17□□□□□ -0.94
BNIP3-202ENST00000540159 FAM19A1Q7Z5A9 133 aa9.17□□□□□ -0.94
BNIP3-202ENST00000540159 CYSTM1Q9H1C7 97 aa9.17□□□□□ -0.94
BNIP3-202ENST00000540159 ZNF561-AS1K7EIQ3 104 aa9.16□□□□□ -0.94
BNIP3-202ENST00000540159 COX17Q14061 63 aa9.16□□□□□ -0.94
BNIP3-202ENST00000540159 CAMK2N2Q96S95 79 aa9.16□□□□□ -0.94
BNIP3-202ENST00000540159 KRTAP10-11P60412 298 aa9.16□□□□□ -0.94
BNIP3-202ENST00000540159 IMUPQ9GZP8 106 aa9.16□□□□□ -0.94
BNIP3-202ENST00000540159 hADV29S1A0JD25 119 aa9.16□□□□□ -0.94
BNIP3-202ENST00000540159 LINC01561Q8N1V8 128 aa9.16□□□□□ -0.94
BNIP3-202ENST00000540159 TRAV23DV6A0A075B6W5 121 aa9.15□□□□□ -0.94
BNIP3-202ENST00000540159 TMEM256-PLSCR3K7ERE1 68 aa9.15□□□□□ -0.94
BNIP3-202ENST00000540159 OBSCN-AS1Q96MR7 158 aa9.15□□□□□ -0.94
BNIP3-202ENST00000540159 CCKP06307 115 aa9.15□□□□□ -0.95
BNIP3-202ENST00000540159 LINC00575Q6W349 94 aa9.15□□□□□ -0.95
BNIP3-202ENST00000540159 NDUFC2O95298 119 aa9.14□□□□□ -0.95
BNIP3-202ENST00000540159 TENM2Q9NT68 2774 aa9.14□□□□□ -0.95
BNIP3-202ENST00000540159 IGKV2D-24A0A075B6R9 120 aa9.13□□□□□ -0.95
BNIP3-202ENST00000540159 Q6ZRU5 148 aa9.13□□□□□ -0.95
BNIP3-202ENST00000540159 C3orf22Q8N5N4 141 aa9.13□□□□□ -0.95
BNIP3-202ENST00000540159 SCXQ7RTU7 201 aa9.13□□□□□ -0.95
BNIP3-202ENST00000540159 PRR34Q9NV39 138 aa9.13□□□□□ -0.95
BNIP3-202ENST00000540159 A0A0J9YWU9 116 aa9.12□□□□□ -0.95
BNIP3-202ENST00000540159 HAMPP81172 84 aa9.12□□□□□ -0.95
BNIP3-202ENST00000540159 ESRGQ1W209 222 aa9.11□□□□□ -0.95
BNIP3-202ENST00000540159 RBM3P98179 157 aaKnown RBP9.11□□□□□ -0.95
BNIP3-202ENST00000540159 STAB2Q8WWQ8 2551 aa9.11□□□□□ -0.95
BNIP3-202ENST00000540159 USP17L23D6RBM5 183 aa9.1□□□□□ -0.95
BNIP3-202ENST00000540159 JMJD7-PLA2G4BH0Y9G9 81 aa9.1□□□□□ -0.95
BNIP3-202ENST00000540159 Q6JHZ5 121 aa9.09□□□□□ -0.95
BNIP3-202ENST00000540159 MRAPQ8TCY5 172 aa9.09□□□□□ -0.95
BNIP3-202ENST00000540159 LYSTQ99698 3801 aa9.09□□□□□ -0.95
BNIP3-202ENST00000540159 UQCRQO14949 82 aa9.09□□□□□ -0.95
BNIP3-202ENST00000540159 LOC107984640A0A0U1RRK4 108 aa9.08□□□□□ -0.96
BNIP3-202ENST00000540159 IGLV6-57P01721 117 aa9.08□□□□□ -0.96
BNIP3-202ENST00000540159 COX7CP15954 63 aa9.08□□□□□ -0.96
BNIP3-202ENST00000540159 DIRC1Q969H9 104 aa9.08□□□□□ -0.96
BNIP3-202ENST00000540159 ZNF73O43830 326 aaPredicted RBP9.08□□□□□ -0.96
BNIP3-202ENST00000540159 C2orf48Q96LS8 159 aa9.08□□□□□ -0.96
BNIP3-202ENST00000540159 LINC00167Q96N53 147 aa9.08□□□□□ -0.96
BNIP3-202ENST00000540159 DEFB105AQ8NG35 78 aa9.07□□□□□ -0.96
BNIP3-202ENST00000540159 UBL5Q9BZL1 73 aa9.07□□□□□ -0.96
BNIP3-202ENST00000540159 ATOX1O00244 68 aa9.06□□□□□ -0.96
BNIP3-202ENST00000540159 DEFB131BA0A096LNP1 70 aa9.06□□□□□ -0.96
BNIP3-202ENST00000540159 C15orf56Q8N910 161 aa9.06□□□□□ -0.96
BNIP3-202ENST00000540159 C1orf43Q9BWL3 253 aa9.06□□□□□ -0.96
BNIP3-202ENST00000540159 DSCR8Q96T75 97 aa9.06□□□□□ -0.96
BNIP3-202ENST00000540159 Q6ZRP5 223 aa9.05□□□□□ -0.96
BNIP3-202ENST00000540159 GHRHP01286 108 aa9.04□□□□□ -0.96
BNIP3-202ENST00000540159 Q6ZQT0 140 aa9.04□□□□□ -0.96
BNIP3-202ENST00000540159 UPK3BQ9BT76 320 aa9.04□□□□□ -0.96
BNIP3-202ENST00000540159 COX7BP24311 80 aa9.03□□□□□ -0.96
BNIP3-202ENST00000540159 RPL37AP8A6NKH3 93 aa9.03□□□□□ -0.96
BNIP3-202ENST00000540159 KRTAP24-1Q3LI83 254 aa9.03□□□□□ -0.96
BNIP3-202ENST00000540159 VPREB1P12018 145 aa9.03□□□□□ -0.96
BNIP3-202ENST00000540159 CASC10Q5T4H9 136 aa9.03□□□□□ -0.96
BNIP3-202ENST00000540159 SRRM2Q9UQ35 2752 aaKnown RBP9.03□□□□□ -0.96
BNIP3-202ENST00000540159 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.02□□□□□ -0.97
BNIP3-202ENST00000540159 C11orf45Q8TAV5 145 aa9.02□□□□□ -0.97
BNIP3-202ENST00000540159 Q8N9L7 120 aa9.01□□□□□ -0.97
BNIP3-202ENST00000540159 KRTAP26-1Q6PEX3 210 aa9.01□□□□□ -0.97
BNIP3-202ENST00000540159 CMYA5Q8N3K9 4069 aa9□□□□□ -0.97
BNIP3-202ENST00000540159 FAM168BA1KXE4 195 aa9□□□□□ -0.97
BNIP3-202ENST00000540159 SERTAD4-AS1Q5TG53 156 aa9□□□□□ -0.97
BNIP3-202ENST00000540159 Q6ZVQ6 151 aa9□□□□□ -0.97
BNIP3-202ENST00000540159 SERP2Q8N6R1 65 aa8.99□□□□□ -0.97
BNIP3-202ENST00000540159 NDUFC2-KCTD14E9PQ53 114 aa8.99□□□□□ -0.97
BNIP3-202ENST00000540159 LINC01547P58512 204 aaPredicted RBP8.99□□□□□ -0.97
BNIP3-202ENST00000540159 MUC7Q8TAX7 377 aa8.99□□□□□ -0.97
BNIP3-202ENST00000540159 C3orf84H3BNL1 204 aa8.98□□□□□ -0.97
BNIP3-202ENST00000540159 C20orf197Q8N268 126 aa8.98□□□□□ -0.97
BNIP3-202ENST00000540159 GVQW2A0A096LPI5 108 aaPredicted RBP8.97□□□□□ -0.97
BNIP3-202ENST00000540159 SYCNQ0VAF6 134 aa8.97□□□□□ -0.97
BNIP3-202ENST00000540159 DNAH10Q8IVF4 4471 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms