RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 XAGE1AQ9HD64 81 aa4.28□□□□□ -1.72
PTPRD-214ENST00000540109 A0A1B0GUV1 79 aa4.28□□□□□ -1.72
PTPRD-214ENST00000540109 LINC00315P59091 139 aa4.28□□□□□ -1.72
PTPRD-214ENST00000540109 FRYQ5TBA9 3013 aa4.28□□□□□ -1.72
PTPRD-214ENST00000540109 SPINT4Q6UDR6 99 aa4.28□□□□□ -1.72
PTPRD-214ENST00000540109 WDFY4Q6ZS81 3184 aa4.28□□□□□ -1.72
PTPRD-214ENST00000540109 KRTAP10-9P60411 292 aa4.28□□□□□ -1.72
PTPRD-214ENST00000540109 SPEGQ15772 3267 aa4.28□□□□□ -1.72
PTPRD-214ENST00000540109 SLURP1P55000 103 aa4.27□□□□□ -1.73
PTPRD-214ENST00000540109 C11orf72Q8NBR9 251 aa4.27□□□□□ -1.73
PTPRD-214ENST00000540109 H7BZZ5 65 aa4.27□□□□□ -1.73
PTPRD-214ENST00000540109 SMIM29Q86T20 159 aa4.27□□□□□ -1.73
PTPRD-214ENST00000540109 MUC3AQ02505 3323 aa4.27□□□□□ -1.73
PTPRD-214ENST00000540109 A0A096LNI7 61 aa4.27□□□□□ -1.73
PTPRD-214ENST00000540109 C9orf66Q5T8R8 295 aa4.27□□□□□ -1.73
PTPRD-214ENST00000540109 SPTAN1Q13813 2472 aaKnown RBP4.27□□□□□ -1.73
PTPRD-214ENST00000540109 Q1T7F1 81 aa4.27□□□□□ -1.73
PTPRD-214ENST00000540109 LINC00337Q8N6G1 96 aa4.27□□□□□ -1.73
PTPRD-214ENST00000540109 ACACBO00763 2458 aa4.27□□□□□ -1.73
PTPRD-214ENST00000540109 HRNRQ86YZ3 2850 aaPredicted RBP4.27□□□□□ -1.73
PTPRD-214ENST00000540109 CR1P17927 2039 aa4.26□□□□□ -1.73
PTPRD-214ENST00000540109 MAPK1IP1LQ8NDC0 245 aa4.26□□□□□ -1.73
PTPRD-214ENST00000540109 IGKV2D-24A0A075B6R9 120 aa4.26□□□□□ -1.73
PTPRD-214ENST00000540109 C10orf99Q6UWK7 81 aa4.26□□□□□ -1.73
PTPRD-214ENST00000540109 CHCHD10Q8WYQ3 142 aaPredicted RBP4.26□□□□□ -1.73
PTPRD-214ENST00000540109 ITPR1Q14643 2758 aa4.25□□□□□ -1.73
PTPRD-214ENST00000540109 TRAV22A0A0B4J277 110 aa4.25□□□□□ -1.73
PTPRD-214ENST00000540109 LINC00959A0A1B0GUT2 108 aa4.25□□□□□ -1.73
PTPRD-214ENST00000540109 CYSTM1Q9H1C7 97 aa4.24□□□□□ -1.73
PTPRD-214ENST00000540109 LOC101927531A0A1B0GV80 90 aa4.24□□□□□ -1.73
PTPRD-214ENST00000540109 H0Y9P7 68 aa4.24□□□□□ -1.73
PTPRD-214ENST00000540109 C10orf25Q5T742 122 aa4.24□□□□□ -1.73
PTPRD-214ENST00000540109 Q6ZQT0 140 aa4.24□□□□□ -1.73
PTPRD-214ENST00000540109 Q6ZRU5 148 aa4.24□□□□□ -1.73
PTPRD-214ENST00000540109 IGSF10Q6WRI0 2623 aa4.24□□□□□ -1.73
PTPRD-214ENST00000540109 BSNQ9UPA5 3926 aa4.24□□□□□ -1.73
PTPRD-214ENST00000540109 LOC100131303A0A0U1RQF7 123 aa4.24□□□□□ -1.73
PTPRD-214ENST00000540109 PSCAO43653 123 aa4.24□□□□□ -1.73
PTPRD-214ENST00000540109 LINC01006Q8NI28 216 aa4.24□□□□□ -1.73
PTPRD-214ENST00000540109 ZFHX4Q86UP3 3567 aa4.23□□□□□ -1.73
PTPRD-214ENST00000540109 LY6G6DO95868 133 aa4.23□□□□□ -1.73
PTPRD-214ENST00000540109 C1orf137Q5JT78 98 aa4.23□□□□□ -1.73
PTPRD-214ENST00000540109 IGLV1-51P01701 117 aa4.23□□□□□ -1.73
PTPRD-214ENST00000540109 IGKV2-28A0A075B6P5 120 aa4.23□□□□□ -1.73
PTPRD-214ENST00000540109 IGKV2D-28P01615 120 aa4.23□□□□□ -1.73
PTPRD-214ENST00000540109 KLK12Q9UKR0 248 aa4.23□□□□□ -1.73
PTPRD-214ENST00000540109 UBR5O95071 2799 aaPredicted RBP4.23□□□□□ -1.73
PTPRD-214ENST00000540109 USP24Q9UPU5 2620 aa4.23□□□□□ -1.73
PTPRD-214ENST00000540109 KRTAP1-1Q07627 177 aa4.23□□□□□ -1.73
PTPRD-214ENST00000540109 ODF3L2Q3SX64 289 aa4.23□□□□□ -1.73
PTPRD-214ENST00000540109 C9orf116Q5BN46 136 aaPredicted RBP4.23□□□□□ -1.73
PTPRD-214ENST00000540109 LELP1Q5T871 98 aa4.23□□□□□ -1.73
PTPRD-214ENST00000540109 SPATA3Q8NHX4 192 aa4.23□□□□□ -1.73
PTPRD-214ENST00000540109 SYCNQ0VAF6 134 aa4.22□□□□□ -1.73
PTPRD-214ENST00000540109 USP9XQ93008 2570 aaPredicted RBP4.22□□□□□ -1.73
PTPRD-214ENST00000540109 A0A087X002 238 aa4.22□□□□□ -1.73
PTPRD-214ENST00000540109 ANKRD17O75179 2603 aaKnown RBP4.22□□□□□ -1.73
PTPRD-214ENST00000540109 ACYP2P14621 99 aa4.22□□□□□ -1.73
PTPRD-214ENST00000540109 C1orf64Q8NEQ6 169 aa4.22□□□□□ -1.73
PTPRD-214ENST00000540109 PRAC1Q96KF2 57 aa4.22□□□□□ -1.73
PTPRD-214ENST00000540109 DMXL2Q8TDJ6 3036 aa4.22□□□□□ -1.73
PTPRD-214ENST00000540109 OXTP01178 125 aa4.22□□□□□ -1.73
PTPRD-214ENST00000540109 ZNF462Q96JM2 2506 aa4.22□□□□□ -1.73
PTPRD-214ENST00000540109 OBSCN-AS1Q96MR7 158 aa4.22□□□□□ -1.73
PTPRD-214ENST00000540109 CDC42SE1Q9NRR8 79 aa4.22□□□□□ -1.73
PTPRD-214ENST00000540109 MYO18BQ8IUG5 2567 aa4.21□□□□□ -1.73
PTPRD-214ENST00000540109 LOC400499M0QZD8 3231 aa4.21□□□□□ -1.74
PTPRD-214ENST00000540109 LINC00167Q96N53 147 aa4.21□□□□□ -1.74
PTPRD-214ENST00000540109 Q9BRP9 147 aa4.21□□□□□ -1.74
PTPRD-214ENST00000540109 NAV2Q8IVL1 2488 aa4.21□□□□□ -1.74
PTPRD-214ENST00000540109 C18orf65Q6ZTR6 163 aa4.2□□□□□ -1.74
PTPRD-214ENST00000540109 LYPD5Q6UWN5 251 aa4.2□□□□□ -1.74
PTPRD-214ENST00000540109 ATMQ13315 3056 aa4.2□□□□□ -1.74
PTPRD-214ENST00000540109 LITAFQ99732 161 aa4.2□□□□□ -1.74
PTPRD-214ENST00000540109 IGLV8-61A0A075B6I0 122 aa4.2□□□□□ -1.74
PTPRD-214ENST00000540109 FP248Q71RG6 208 aaPredicted RBP4.19□□□□□ -1.74
PTPRD-214ENST00000540109 CFAP46Q8IYW2 2715 aa4.19□□□□□ -1.74
PTPRD-214ENST00000540109 KPRPQ5T749 579 aaPredicted RBP4.19□□□□□ -1.74
PTPRD-214ENST00000540109 GVQW2A0A096LPI5 108 aaPredicted RBP4.19□□□□□ -1.74
PTPRD-214ENST00000540109 UBE2DNLQ8IWF7 75 aa4.19□□□□□ -1.74
PTPRD-214ENST00000540109 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.19□□□□□ -1.74
PTPRD-214ENST00000540109 Q8NBF4 154 aa4.19□□□□□ -1.74
PTPRD-214ENST00000540109 TRBV7-4A0A0J9YYF1 115 aa4.19□□□□□ -1.74
PTPRD-214ENST00000540109 DEFB4AO15263 64 aa4.19□□□□□ -1.74
PTPRD-214ENST00000540109 MOBPQ13875 183 aa4.19□□□□□ -1.74
PTPRD-214ENST00000540109 REG3GQ6UW15 175 aa4.19□□□□□ -1.74
PTPRD-214ENST00000540109 C2CD3Q4AC94 2353 aa4.19□□□□□ -1.74
PTPRD-214ENST00000540109 WNK1Q9H4A3 2382 aa4.18□□□□□ -1.74
PTPRD-214ENST00000540109 BOD1L1Q8NFC6 3051 aa4.18□□□□□ -1.74
PTPRD-214ENST00000540109 FAM208BQ5VWN6 2430 aa4.18□□□□□ -1.74
PTPRD-214ENST00000540109 A0A0A0MQY5 61 aa4.18□□□□□ -1.74
PTPRD-214ENST00000540109 FAM229BQ4G0N7 80 aa4.18□□□□□ -1.74
PTPRD-214ENST00000540109 Q6ZTC4 211 aa4.18□□□□□ -1.74
PTPRD-214ENST00000540109 LRRK2Q5S007 2527 aa4.17□□□□□ -1.74
PTPRD-214ENST00000540109 IGHV3OR16-9A0A0B4J2B5 98 aa4.17□□□□□ -1.74
PTPRD-214ENST00000540109 UQCR11O14957 56 aa4.17□□□□□ -1.74
PTPRD-214ENST00000540109 SSBP3-AS1Q7Z2R9 100 aa4.17□□□□□ -1.74
PTPRD-214ENST00000540109 A0A1B0GU69 56 aa4.17□□□□□ -1.74
PTPRD-214ENST00000540109 EIF4EBP3O60516 100 aaPredicted RBP4.17□□□□□ -1.74
PTPRD-214ENST00000540109 RPL37AP61513 92 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 187.4 ms