RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 RPL37AP8A6NKH3 93 aa11.12□□□□□ -0.63
SNRPA1-203ENST00000540017 REG3GQ6UW15 175 aa11.12□□□□□ -0.63
SNRPA1-203ENST00000540017 IGKCP01834 107 aa11.11□□□□□ -0.63
SNRPA1-203ENST00000540017 VPREB1P12018 145 aa11.11□□□□□ -0.63
SNRPA1-203ENST00000540017 LINC00158P58513 81 aa11.11□□□□□ -0.63
SNRPA1-203ENST00000540017 NDUFA12Q9UI09 145 aa11.11□□□□□ -0.63
SNRPA1-203ENST00000540017 LEPROTO15243 131 aa11.1□□□□□ -0.63
SNRPA1-203ENST00000540017 COA6Q5JTJ3 125 aaKnown RBP11.1□□□□□ -0.63
SNRPA1-203ENST00000540017 SYS1-DBNDD2H3BUS1 97 aa11.09□□□□□ -0.63
SNRPA1-203ENST00000540017 SMIM13P0DJ93 91 aa11.09□□□□□ -0.63
SNRPA1-203ENST00000540017 NKAPP1Q8N9T2 125 aa11.09□□□□□ -0.63
SNRPA1-203ENST00000540017 ATP6V1G1O75348 118 aa11.08□□□□□ -0.64
SNRPA1-203ENST00000540017 S100A1P23297 94 aa11.08□□□□□ -0.64
SNRPA1-203ENST00000540017 DIRC1Q969H9 104 aa11.08□□□□□ -0.64
SNRPA1-203ENST00000540017 H0Y9J4 135 aa11.07□□□□□ -0.64
SNRPA1-203ENST00000540017 KRTAP10-8P60410 259 aa11.07□□□□□ -0.64
SNRPA1-203ENST00000540017 HERV-K104P63124 156 aa11.07□□□□□ -0.64
SNRPA1-203ENST00000540017 PLEKHB2Q96CS7 222 aa11.07□□□□□ -0.64
SNRPA1-203ENST00000540017 MYMXA0A1B0GTQ4 84 aa11.06□□□□□ -0.64
SNRPA1-203ENST00000540017 J3QQQ9 107 aa11.06□□□□□ -0.64
SNRPA1-203ENST00000540017 MEIG1Q5JSS6 88 aa11.06□□□□□ -0.64
SNRPA1-203ENST00000540017 LINC01545Q5VT33 79 aa11.05□□□□□ -0.64
SNRPA1-203ENST00000540017 IGKV2-28A0A075B6P5 120 aa11.04□□□□□ -0.64
SNRPA1-203ENST00000540017 ZNF861PO60384 105 aa11.04□□□□□ -0.64
SNRPA1-203ENST00000540017 IGKV2D-28P01615 120 aa11.04□□□□□ -0.64
SNRPA1-203ENST00000540017 C3orf79P0CE67 100 aa11.04□□□□□ -0.64
SNRPA1-203ENST00000540017 HERVK_113P61574 105 aa11.04□□□□□ -0.64
SNRPA1-203ENST00000540017 MIR7-3HGQ8N6C7 128 aa11.04□□□□□ -0.64
SNRPA1-203ENST00000540017 HMCN2Q8NDA2 5059 aa11.03□□□□□ -0.64
SNRPA1-203ENST00000540017 BCE1O60756 84 aa11.03□□□□□ -0.64
SNRPA1-203ENST00000540017 RPL24P83731 157 aaKnown RBP11.03□□□□□ -0.64
SNRPA1-203ENST00000540017 PET117Q6UWS5 81 aa11.03□□□□□ -0.64
SNRPA1-203ENST00000540017 IGLV1-50A0A075B6I6 118 aa11.02□□□□□ -0.65
SNRPA1-203ENST00000540017 KRTAP1-4P0C5Y4 121 aa11.02□□□□□ -0.65
SNRPA1-203ENST00000540017 LGALS3P17931 250 aaKnown RBP11.01□□□□□ -0.65
SNRPA1-203ENST00000540017 E9PLD3 99 aa11□□□□□ -0.65
SNRPA1-203ENST00000540017 DAND5Q8N907 189 aa11□□□□□ -0.65
SNRPA1-203ENST00000540017 LINC00587B1AMM8 73 aa10.99□□□□□ -0.65
SNRPA1-203ENST00000540017 TMEM238C9JI98 176 aa10.99□□□□□ -0.65
SNRPA1-203ENST00000540017 NMUP48645 174 aa10.99□□□□□ -0.65
SNRPA1-203ENST00000540017 KRTDAPP60985 99 aa10.99□□□□□ -0.65
SNRPA1-203ENST00000540017 BOD1L2Q8IYS8 172 aa10.99□□□□□ -0.65
SNRPA1-203ENST00000540017 PRR26Q8N8Z3 221 aa10.99□□□□□ -0.65
SNRPA1-203ENST00000540017 KRTAP13-1Q8IUC0 172 aa10.98□□□□□ -0.65
SNRPA1-203ENST00000540017 RPL28P46779 137 aaKnown RBP10.97□□□□□ -0.65
SNRPA1-203ENST00000540017 TMEM126AQ9H061 195 aa10.97□□□□□ -0.65
SNRPA1-203ENST00000540017 M0R378 163 aa10.96□□□□□ -0.65
SNRPA1-203ENST00000540017 IGKV2D-26A0A0A0MRZ7 120 aa10.95□□□□□ -0.66
SNRPA1-203ENST00000540017 A0A0J9YXY3 114 aa10.95□□□□□ -0.66
SNRPA1-203ENST00000540017 NCR3O14931 201 aa10.95□□□□□ -0.66
SNRPA1-203ENST00000540017 LOC107984156A0A0G2JMH3 177 aa10.94□□□□□ -0.66
SNRPA1-203ENST00000540017 UBE2AP49459 152 aa10.94□□□□□ -0.66
SNRPA1-203ENST00000540017 ADAMTSL4-AS1Q5T5F5 129 aa10.94□□□□□ -0.66
SNRPA1-203ENST00000540017 ARL17AQ8IVW1 177 aa10.94□□□□□ -0.66
SNRPA1-203ENST00000540017 PRLHP81277 87 aa10.93□□□□□ -0.66
SNRPA1-203ENST00000540017 EIF4EBP3O60516 100 aaPredicted RBP10.92□□□□□ -0.66
SNRPA1-203ENST00000540017 FAM19A1Q7Z5A9 133 aa10.92□□□□□ -0.66
SNRPA1-203ENST00000540017 HIST3H2BBQ8N257 126 aa10.92□□□□□ -0.66
SNRPA1-203ENST00000540017 TTTY13Q9BZ97 58 aa10.92□□□□□ -0.66
SNRPA1-203ENST00000540017 SOSTDC1Q6X4U4 206 aa10.91□□□□□ -0.66
SNRPA1-203ENST00000540017 NPC2P61916 151 aa10.89□□□□□ -0.67
SNRPA1-203ENST00000540017 ATOH7Q8N100 152 aa10.89□□□□□ -0.67
SNRPA1-203ENST00000540017 LITAFQ99732 161 aa10.89□□□□□ -0.67
SNRPA1-203ENST00000540017 TRBV10-3A0A0K0K1G6 114 aa10.88□□□□□ -0.67
SNRPA1-203ENST00000540017 HIST1H2BLQ99880 126 aa10.88□□□□□ -0.67
SNRPA1-203ENST00000540017 ANAPC11Q9NYG5 84 aa10.88□□□□□ -0.67
SNRPA1-203ENST00000540017 C20orf202A1L168 122 aa10.87□□□□□ -0.67
SNRPA1-203ENST00000540017 ZNF815PA8K554 130 aa10.87□□□□□ -0.67
SNRPA1-203ENST00000540017 ANKRD39Q53RE8 183 aa10.87□□□□□ -0.67
SNRPA1-203ENST00000540017 KCNQ1DNQ9H478 68 aa10.87□□□□□ -0.67
SNRPA1-203ENST00000540017 A0A087X002 238 aa10.85□□□□□ -0.67
SNRPA1-203ENST00000540017 PRYO14603 147 aa10.85□□□□□ -0.67
SNRPA1-203ENST00000540017 MIEN1Q9BRT3 115 aa10.85□□□□□ -0.67
SNRPA1-203ENST00000540017 TRBV10-2A0A0K0K1G8 114 aa10.84□□□□□ -0.67
SNRPA1-203ENST00000540017 NDUFC2O95298 119 aa10.84□□□□□ -0.67
SNRPA1-203ENST00000540017 SPRR1AP35321 89 aa10.84□□□□□ -0.67
SNRPA1-203ENST00000540017 KRTAP4-16G5E9R7 235 aaPredicted RBP10.83□□□□□ -0.68
SNRPA1-203ENST00000540017 TIMM17BO60830 172 aa10.83□□□□□ -0.68
SNRPA1-203ENST00000540017 S100A2P29034 98 aa10.83□□□□□ -0.68
SNRPA1-203ENST00000540017 SPANXB1Q9NS25 103 aaPredicted RBP10.83□□□□□ -0.68
SNRPA1-203ENST00000540017 DDTP30046 118 aa10.82□□□□□ -0.68
SNRPA1-203ENST00000540017 RPL13AP40429 203 aaKnown RBP10.82□□□□□ -0.68
SNRPA1-203ENST00000540017 LINC00308Q8TCZ7 52 aa10.82□□□□□ -0.68
SNRPA1-203ENST00000540017 S100A6P06703 90 aa10.81□□□□□ -0.68
SNRPA1-203ENST00000540017 SNRPEP62304 92 aaKnown RBP10.81□□□□□ -0.68
SNRPA1-203ENST00000540017 LINC00337Q8N6G1 96 aa10.81□□□□□ -0.68
SNRPA1-203ENST00000540017 HIGD2AQ9BW72 106 aa10.81□□□□□ -0.68
SNRPA1-203ENST00000540017 PCP2Q8IVA1 136 aa10.8□□□□□ -0.68
SNRPA1-203ENST00000540017 IGLV6-57P01721 117 aa10.79□□□□□ -0.68
SNRPA1-203ENST00000540017 CRYGAP11844 174 aa10.79□□□□□ -0.68
SNRPA1-203ENST00000540017 KRTAP13-2Q52LG2 175 aa10.79□□□□□ -0.68
SNRPA1-203ENST00000540017 ETDCA0A1B0GVM5 59 aa10.77□□□□□ -0.69
SNRPA1-203ENST00000540017 AKR1D1P51857 326 aa10.77□□□□□ -0.69
SNRPA1-203ENST00000540017 S100A7L2Q5SY68 101 aa10.77□□□□□ -0.69
SNRPA1-203ENST00000540017 C5orf52A6NGY3 159 aa10.76□□□□□ -0.69
SNRPA1-203ENST00000540017 B5MCH6 92 aa10.76□□□□□ -0.69
SNRPA1-203ENST00000540017 SPANXCQ9NY87 97 aa10.76□□□□□ -0.69
SNRPA1-203ENST00000540017 FAM229BQ4G0N7 80 aa10.75□□□□□ -0.69
SNRPA1-203ENST00000540017 SCGB1D4Q6XE38 83 aa10.75□□□□□ -0.69
SNRPA1-203ENST00000540017 TYMSOSQ8TAI1 123 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms