RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 ADAMTSL4-AS1Q5T5F5 129 aa6.93□□□□□ -1.3
LEMD3-202ENST00000539442 COPS9Q8WXC6 57 aa6.93□□□□□ -1.3
LEMD3-202ENST00000539442 HIST1H4GQ99525 98 aa6.93□□□□□ -1.3
LEMD3-202ENST00000539442 PPDPFQ9H3Y8 114 aa6.93□□□□□ -1.3
LEMD3-202ENST00000539442 A0A0U1RRA0 63 aa6.92□□□□□ -1.3
LEMD3-202ENST00000539442 NDUFC2-KCTD14E9PQ53 114 aa6.92□□□□□ -1.3
LEMD3-202ENST00000539442 TLX1NBP0CAT3 122 aa6.92□□□□□ -1.3
LEMD3-202ENST00000539442 CTAG1AP78358 180 aa6.92□□□□□ -1.3
LEMD3-202ENST00000539442 C9orf116Q5BN46 136 aaPredicted RBP6.92□□□□□ -1.3
LEMD3-202ENST00000539442 MIR7-3HGQ8N6C7 128 aa6.92□□□□□ -1.3
LEMD3-202ENST00000539442 PKIGQ9Y2B9 76 aa6.92□□□□□ -1.3
LEMD3-202ENST00000539442 DNAH2Q9P225 4427 aa6.92□□□□□ -1.3
LEMD3-202ENST00000539442 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.91□□□□□ -1.3
LEMD3-202ENST00000539442 M0R143 59 aa6.91□□□□□ -1.3
LEMD3-202ENST00000539442 LINC00336Q6ZUF6 198 aa6.9□□□□□ -1.3
LEMD3-202ENST00000539442 CEND1Q8N111 149 aa6.9□□□□□ -1.3
LEMD3-202ENST00000539442 DAND5Q8N907 189 aa6.9□□□□□ -1.3
LEMD3-202ENST00000539442 LINC00308Q8TCZ7 52 aa6.9□□□□□ -1.3
LEMD3-202ENST00000539442 RYR2Q92736 4967 aa6.9□□□□□ -1.31
LEMD3-202ENST00000539442 DNAH17Q9UFH2 4485 aa6.89□□□□□ -1.31
LEMD3-202ENST00000539442 LOC107984156A0A0G2JMH3 177 aa6.89□□□□□ -1.31
LEMD3-202ENST00000539442 LOC107984640A0A0U1RRK4 108 aa6.89□□□□□ -1.31
LEMD3-202ENST00000539442 RPL24P83731 157 aaKnown RBP6.89□□□□□ -1.31
LEMD3-202ENST00000539442 MUSTN1Q8IVN3 82 aa6.89□□□□□ -1.31
LEMD3-202ENST00000539442 ARL17AQ8IVW1 177 aa6.89□□□□□ -1.31
LEMD3-202ENST00000539442 C9orf163Q8N9P6 203 aa6.89□□□□□ -1.31
LEMD3-202ENST00000539442 TMEM238LA0A1B0GVL6 79 aa6.88□□□□□ -1.31
LEMD3-202ENST00000539442 BVES-AS1Q5T3Y7 98 aa6.88□□□□□ -1.31
LEMD3-202ENST00000539442 Q6ZRP5 223 aa6.88□□□□□ -1.31
LEMD3-202ENST00000539442 SND1-IT1Q9HBX3 110 aa6.88□□□□□ -1.31
LEMD3-202ENST00000539442 HINT1P49773 126 aaPredicted RBP6.87□□□□□ -1.31
LEMD3-202ENST00000539442 NPC2P61916 151 aa6.87□□□□□ -1.31
LEMD3-202ENST00000539442 RPL18AQ02543 176 aaKnown RBP6.87□□□□□ -1.31
LEMD3-202ENST00000539442 SOSTDC1Q6X4U4 206 aa6.87□□□□□ -1.31
LEMD3-202ENST00000539442 IGLV5-52A0A0A0MRZ9 124 aa6.86□□□□□ -1.31
LEMD3-202ENST00000539442 FXYD2P54710 66 aa6.86□□□□□ -1.31
LEMD3-202ENST00000539442 KMT2CQ8NEZ4 4911 aaKnown RBP6.86□□□□□ -1.31
LEMD3-202ENST00000539442 A4D1N5 150 aa6.85□□□□□ -1.31
LEMD3-202ENST00000539442 C16orf90A8MZG2 172 aa6.85□□□□□ -1.31
LEMD3-202ENST00000539442 NDUFC2O95298 119 aa6.85□□□□□ -1.31
LEMD3-202ENST00000539442 GAGE2EQ4V326 116 aa6.85□□□□□ -1.31
LEMD3-202ENST00000539442 GAGE2DQ9UEU5 116 aa6.85□□□□□ -1.31
LEMD3-202ENST00000539442 FRAS1Q86XX4 4008 aa6.84□□□□□ -1.31
LEMD3-202ENST00000539442 GAGE2BQ13066 116 aa6.84□□□□□ -1.31
LEMD3-202ENST00000539442 SDIM1Q6ZPB5 146 aa6.84□□□□□ -1.31
LEMD3-202ENST00000539442 XAGE1AQ9HD64 81 aa6.84□□□□□ -1.31
LEMD3-202ENST00000539442 A6NDN8 102 aa6.83□□□□□ -1.32
LEMD3-202ENST00000539442 BATFQ16520 125 aa6.83□□□□□ -1.32
LEMD3-202ENST00000539442 C9orf129Q5T035 196 aaKnown RBP6.83□□□□□ -1.32
LEMD3-202ENST00000539442 SNHG12Q9BXW3 62 aa6.83□□□□□ -1.32
LEMD3-202ENST00000539442 LINC00474Q9P2X8 69 aa6.83□□□□□ -1.32
LEMD3-202ENST00000539442 PLA2G2DQ9UNK4 145 aa6.83□□□□□ -1.32
LEMD3-202ENST00000539442 A0A096LNI7 61 aa6.82□□□□□ -1.32
LEMD3-202ENST00000539442 A0A0B4J2C4 111 aa6.82□□□□□ -1.32
LEMD3-202ENST00000539442 A0A1B0GWB2 263 aa6.82□□□□□ -1.32
LEMD3-202ENST00000539442 NHP2Q9NX24 153 aaKnown RBP6.82□□□□□ -1.32
LEMD3-202ENST00000539442 TRBV10-2A0A0K0K1G8 114 aa6.81□□□□□ -1.32
LEMD3-202ENST00000539442 CFC1BP0CG36 223 aa6.81□□□□□ -1.32
LEMD3-202ENST00000539442 CFC1P0CG37 223 aa6.81□□□□□ -1.32
LEMD3-202ENST00000539442 VPREB1P12018 145 aa6.81□□□□□ -1.32
LEMD3-202ENST00000539442 KRTAP10-2P60368 255 aa6.81□□□□□ -1.32
LEMD3-202ENST00000539442 FAT2Q9NYQ8 4349 aa6.8□□□□□ -1.32
LEMD3-202ENST00000539442 IGLV5-37A0A075B6J1 123 aa6.8□□□□□ -1.32
LEMD3-202ENST00000539442 TRAV13-2A0A0B4J235 113 aa6.8□□□□□ -1.32
LEMD3-202ENST00000539442 IGKV2-24A0A0C4DH68 120 aa6.8□□□□□ -1.32
LEMD3-202ENST00000539442 LINC01620Q4KN68 170 aa6.8□□□□□ -1.32
LEMD3-202ENST00000539442 RAB37Q96AX2 223 aa6.8□□□□□ -1.32
LEMD3-202ENST00000539442 DNAH11Q96DT5 4516 aa6.79□□□□□ -1.32
LEMD3-202ENST00000539442 IGKV2-28A0A075B6P5 120 aa6.79□□□□□ -1.32
LEMD3-202ENST00000539442 IGKV2D-28P01615 120 aa6.79□□□□□ -1.32
LEMD3-202ENST00000539442 FUSP35637 526 aaKnown RBP eCLIP6.79□□□□□ -1.32
LEMD3-202ENST00000539442 COL5A1-AS1Q5SY13 56 aa6.79□□□□□ -1.32
LEMD3-202ENST00000539442 Q8NDZ9 215 aa6.79□□□□□ -1.32
LEMD3-202ENST00000539442 A0A1B0GVY2 172 aa6.78□□□□□ -1.32
LEMD3-202ENST00000539442 SPACA4Q8TDM5 124 aa6.78□□□□□ -1.32
LEMD3-202ENST00000539442 PRO1854Q9UHT4 67 aa6.78□□□□□ -1.32
LEMD3-202ENST00000539442 K7ERJ3 54 aa6.77□□□□□ -1.33
LEMD3-202ENST00000539442 M0R378 163 aa6.77□□□□□ -1.33
LEMD3-202ENST00000539442 NCR3O14931 201 aa6.77□□□□□ -1.33
LEMD3-202ENST00000539442 CHTF8P0CG12 524 aa6.77□□□□□ -1.33
LEMD3-202ENST00000539442 LBHQ53QV2 105 aaPredicted RBP6.77□□□□□ -1.33
LEMD3-202ENST00000539442 SERTAD4-AS1Q5TG53 156 aa6.77□□□□□ -1.33
LEMD3-202ENST00000539442 LINC00337Q8N6G1 96 aa6.77□□□□□ -1.33
LEMD3-202ENST00000539442 NKAPP1Q8N9T2 125 aa6.77□□□□□ -1.33
LEMD3-202ENST00000539442 HECTD4Q9Y4D8 3996 aa6.76□□□□□ -1.33
LEMD3-202ENST00000539442 PRR3P79522 188 aaKnown RBP6.76□□□□□ -1.33
LEMD3-202ENST00000539442 FAM19A5Q7Z5A7 132 aaPredicted RBP6.76□□□□□ -1.33
LEMD3-202ENST00000539442 TMEM126AQ9H061 195 aa6.76□□□□□ -1.33
LEMD3-202ENST00000539442 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.76□□□□□ -1.33
LEMD3-202ENST00000539442 A0A1W2PNN7 141 aa6.75□□□□□ -1.33
LEMD3-202ENST00000539442 FAM168BA1KXE4 195 aa6.75□□□□□ -1.33
LEMD3-202ENST00000539442 EPM2AB3EWF7 344 aa6.75□□□□□ -1.33
LEMD3-202ENST00000539442 RPL13AP40429 203 aaKnown RBP6.75□□□□□ -1.33
LEMD3-202ENST00000539442 S100A7L2Q5SY68 101 aa6.75□□□□□ -1.33
LEMD3-202ENST00000539442 KRTAP7-1Q8IUC3 87 aa6.75□□□□□ -1.33
LEMD3-202ENST00000539442 OR13C6PQ8NH95 151 aa6.75□□□□□ -1.33
LEMD3-202ENST00000539442 CBY1Q9Y3M2 126 aa6.75□□□□□ -1.33
LEMD3-202ENST00000539442 PANO1I0J062 215 aa6.74□□□□□ -1.33
LEMD3-202ENST00000539442 M0QXV9 152 aa6.74□□□□□ -1.33
LEMD3-202ENST00000539442 IGLV6-57P01721 117 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms