RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 ZNF625Q96I27 306 aaPredicted RBP9.79□□□□□ -0.84
RPAIN-206ENST00000539417 SERTAD4-AS1Q5TG53 156 aa9.79□□□□□ -0.84
RPAIN-206ENST00000539417 C7orf33Q8WU49 177 aa9.79□□□□□ -0.84
RPAIN-206ENST00000539417 HSBP1L1C9JCN9 74 aa9.78□□□□□ -0.84
RPAIN-206ENST00000539417 LBHQ53QV2 105 aaPredicted RBP9.78□□□□□ -0.84
RPAIN-206ENST00000539417 UQCR10Q9UDW1 63 aa9.78□□□□□ -0.84
RPAIN-206ENST00000539417 PFN2P35080 140 aa9.77□□□□□ -0.85
RPAIN-206ENST00000539417 TSPEAR-AS2P59090 65 aa9.77□□□□□ -0.85
RPAIN-206ENST00000539417 PRR3P79522 188 aaKnown RBP9.77□□□□□ -0.85
RPAIN-206ENST00000539417 ATOH7Q8N100 152 aa9.77□□□□□ -0.85
RPAIN-206ENST00000539417 DPM2O94777 84 aa9.76□□□□□ -0.85
RPAIN-206ENST00000539417 IGKCP01834 107 aa9.75□□□□□ -0.85
RPAIN-206ENST00000539417 PLNP26678 52 aa9.74□□□□□ -0.85
RPAIN-206ENST00000539417 ERG28Q9UKR5 140 aa9.74□□□□□ -0.85
RPAIN-206ENST00000539417 M0QXV9 152 aa9.73□□□□□ -0.85
RPAIN-206ENST00000539417 M0R143 59 aa9.73□□□□□ -0.85
RPAIN-206ENST00000539417 PSORS1C2Q9UIG4 136 aa9.73□□□□□ -0.85
RPAIN-206ENST00000539417 HERC1Q15751 4861 aa9.72□□□□□ -0.85
RPAIN-206ENST00000539417 A0A0U1RRA0 63 aa9.72□□□□□ -0.85
RPAIN-206ENST00000539417 C22orf24Q9Y442 160 aa9.72□□□□□ -0.85
RPAIN-206ENST00000539417 LEPROTO15243 131 aa9.71□□□□□ -0.86
RPAIN-206ENST00000539417 Q8NDZ9 215 aa9.71□□□□□ -0.86
RPAIN-206ENST00000539417 SND1-IT1Q9HBX3 110 aa9.7□□□□□ -0.86
RPAIN-206ENST00000539417 NDUFA12Q9UI09 145 aa9.7□□□□□ -0.86
RPAIN-206ENST00000539417 SMIM13P0DJ93 91 aa9.68□□□□□ -0.86
RPAIN-206ENST00000539417 SNHG12Q9BXW3 62 aa9.68□□□□□ -0.86
RPAIN-206ENST00000539417 J3QQQ9 107 aa9.67□□□□□ -0.86
RPAIN-206ENST00000539417 LINC00158P58513 81 aa9.67□□□□□ -0.86
RPAIN-206ENST00000539417 SRSF9Q13242 221 aaKnown RBP eCLIP9.67□□□□□ -0.86
RPAIN-206ENST00000539417 COX17Q14061 63 aa9.67□□□□□ -0.86
RPAIN-206ENST00000539417 C1orf137Q5JT78 98 aa9.67□□□□□ -0.86
RPAIN-206ENST00000539417 SLC25A34Q6PIV7 304 aa9.67□□□□□ -0.86
RPAIN-206ENST00000539417 PLA2G2DQ9UNK4 145 aa9.67□□□□□ -0.86
RPAIN-206ENST00000539417 SFTA2Q6UW10 78 aa9.66□□□□□ -0.86
RPAIN-206ENST00000539417 PLEKHB2Q96CS7 222 aa9.66□□□□□ -0.86
RPAIN-206ENST00000539417 GAGE10A6NGK3 116 aa9.66□□□□□ -0.86
RPAIN-206ENST00000539417 HERVK_113P61574 105 aa9.66□□□□□ -0.86
RPAIN-206ENST00000539417 UBE2BP63146 152 aa9.66□□□□□ -0.86
RPAIN-206ENST00000539417 MYMXA0A1B0GTQ4 84 aa9.65□□□□□ -0.87
RPAIN-206ENST00000539417 E9PLD3 99 aa9.65□□□□□ -0.87
RPAIN-206ENST00000539417 COX8AP10176 69 aa9.65□□□□□ -0.87
RPAIN-206ENST00000539417 VPREB1P12018 145 aa9.65□□□□□ -0.87
RPAIN-206ENST00000539417 MEIG1Q5JSS6 88 aa9.65□□□□□ -0.87
RPAIN-206ENST00000539417 MRPL55Q7Z7F7 128 aaKnown RBP9.65□□□□□ -0.87
RPAIN-206ENST00000539417 LINC00167Q96N53 147 aa9.65□□□□□ -0.87
RPAIN-206ENST00000539417 IGLV5-37A0A075B6J1 123 aa9.64□□□□□ -0.87
RPAIN-206ENST00000539417 IGKV2D-26A0A0A0MRZ7 120 aa9.64□□□□□ -0.87
RPAIN-206ENST00000539417 RPL37AP8A6NKH3 93 aa9.64□□□□□ -0.87
RPAIN-206ENST00000539417 KRTAP29-1A8MX34 341 aaPredicted RBP9.64□□□□□ -0.87
RPAIN-206ENST00000539417 HERV-K104P63124 156 aa9.64□□□□□ -0.87
RPAIN-206ENST00000539417 LGALS3P17931 250 aaKnown RBP9.63□□□□□ -0.87
RPAIN-206ENST00000539417 MIR7-3HGQ8N6C7 128 aa9.63□□□□□ -0.87
RPAIN-206ENST00000539417 DAND5Q8N907 189 aa9.63□□□□□ -0.87
RPAIN-206ENST00000539417 TTTY13Q9BZ97 58 aa9.63□□□□□ -0.87
RPAIN-206ENST00000539417 TP73-AS1Q9UF72 201 aa9.63□□□□□ -0.87
RPAIN-206ENST00000539417 TNXBP22105 4242 aa9.63□□□□□ -0.87
RPAIN-206ENST00000539417 IGLV7-43P04211 117 aa9.61□□□□□ -0.87
RPAIN-206ENST00000539417 DLEU1O43261 78 aa9.6□□□□□ -0.87
RPAIN-206ENST00000539417 ANKRD39Q53RE8 183 aa9.6□□□□□ -0.87
RPAIN-206ENST00000539417 COL5A1-AS1Q5SY13 56 aa9.6□□□□□ -0.87
RPAIN-206ENST00000539417 SPINK6Q6UWN8 80 aa9.59□□□□□ -0.87
RPAIN-206ENST00000539417 NKAPP1Q8N9T2 125 aa9.59□□□□□ -0.87
RPAIN-206ENST00000539417 DMBT1Q9UGM3 2413 aaPredicted RBP9.59□□□□□ -0.87
RPAIN-206ENST00000539417 A0A0J9YXY3 114 aa9.59□□□□□ -0.87
RPAIN-206ENST00000539417 NMUP48645 174 aa9.59□□□□□ -0.87
RPAIN-206ENST00000539417 BATFQ16520 125 aa9.59□□□□□ -0.87
RPAIN-206ENST00000539417 BOD1L2Q8IYS8 172 aa9.59□□□□□ -0.87
RPAIN-206ENST00000539417 A0A1B0GV90 55 aa9.58□□□□□ -0.88
RPAIN-206ENST00000539417 EIF4EBP3O60516 100 aaPredicted RBP9.58□□□□□ -0.88
RPAIN-206ENST00000539417 OXTP01178 125 aa9.58□□□□□ -0.88
RPAIN-206ENST00000539417 MT1HL1P0DM35 61 aa9.58□□□□□ -0.88
RPAIN-206ENST00000539417 ADAMTSL4-AS1Q5T5F5 129 aa9.58□□□□□ -0.88
RPAIN-206ENST00000539417 IGKV2-28A0A075B6P5 120 aa9.57□□□□□ -0.88
RPAIN-206ENST00000539417 J3QL48 77 aa9.57□□□□□ -0.88
RPAIN-206ENST00000539417 IGKV2D-28P01615 120 aa9.57□□□□□ -0.88
RPAIN-206ENST00000539417 RPL24P83731 157 aaKnown RBP9.56□□□□□ -0.88
RPAIN-206ENST00000539417 IGLV1-50A0A075B6I6 118 aa9.55□□□□□ -0.88
RPAIN-206ENST00000539417 HINT1P49773 126 aaPredicted RBP9.55□□□□□ -0.88
RPAIN-206ENST00000539417 SOSTDC1Q6X4U4 206 aa9.55□□□□□ -0.88
RPAIN-206ENST00000539417 LITAFQ99732 161 aa9.55□□□□□ -0.88
RPAIN-206ENST00000539417 TMEM238C9JI98 176 aa9.54□□□□□ -0.88
RPAIN-206ENST00000539417 NCR3O14931 201 aa9.54□□□□□ -0.88
RPAIN-206ENST00000539417 ZNF815PA8K554 130 aa9.53□□□□□ -0.88
RPAIN-206ENST00000539417 NPC2P61916 151 aa9.53□□□□□ -0.88
RPAIN-206ENST00000539417 C2orf91Q6ZV80 131 aa9.53□□□□□ -0.88
RPAIN-206ENST00000539417 BCE1O60756 84 aa9.53□□□□□ -0.88
RPAIN-206ENST00000539417 LOC107984156A0A0G2JMH3 177 aa9.52□□□□□ -0.89
RPAIN-206ENST00000539417 BVES-AS1Q5T3Y7 98 aa9.52□□□□□ -0.89
RPAIN-206ENST00000539417 PCP2Q8IVA1 136 aa9.52□□□□□ -0.89
RPAIN-206ENST00000539417 ARL17AQ8IVW1 177 aa9.52□□□□□ -0.89
RPAIN-206ENST00000539417 LINC01600Q96MT4 127 aa9.52□□□□□ -0.89
RPAIN-206ENST00000539417 HIGD1BQ9P298 99 aa9.52□□□□□ -0.89
RPAIN-206ENST00000539417 H0Y9J4 135 aa9.51□□□□□ -0.89
RPAIN-206ENST00000539417 M0R378 163 aa9.51□□□□□ -0.89
RPAIN-206ENST00000539417 HSD52Q0P140 79 aa9.51□□□□□ -0.89
RPAIN-206ENST00000539417 ZNF861PO60384 105 aa9.5□□□□□ -0.89
RPAIN-206ENST00000539417 KRTAP13-1Q8IUC0 172 aa9.5□□□□□ -0.89
RPAIN-206ENST00000539417 TMEM126AQ9H061 195 aa9.5□□□□□ -0.89
RPAIN-206ENST00000539417 DIRC1Q969H9 104 aa9.49□□□□□ -0.89
RPAIN-206ENST00000539417 KRTAP1-4P0C5Y4 121 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms